RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 RANGAP1P46060 587 aaPredicted RBP20.8■□□□□ 0.92
PHGDH-220ENST00000641570 KIAA0586Q9BVV6 1533 aa20.79■□□□□ 0.92
PHGDH-220ENST00000641570 CEP170Q5SW79 1584 aa20.78■□□□□ 0.92
PHGDH-220ENST00000641570 TNIKQ9UKE5 1360 aa20.77■□□□□ 0.92
PHGDH-220ENST00000641570 IQGAP2Q13576 1575 aa20.76■□□□□ 0.91
PHGDH-220ENST00000641570 CTTNBP2Q8WZ74 1663 aa20.76■□□□□ 0.91
PHGDH-220ENST00000641570 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
PHGDH-220ENST00000641570 CARMIL2Q6F5E8 1435 aa20.69■□□□□ 0.9
PHGDH-220ENST00000641570 CLASP1Q7Z460 1538 aa20.68■□□□□ 0.9
PHGDH-220ENST00000641570 DNAJC5Q9H3Z4 198 aa20.64■□□□□ 0.89
PHGDH-220ENST00000641570 CLIP1P30622 1438 aa20.63■□□□□ 0.89
PHGDH-220ENST00000641570 CEP162Q5TB80 1403 aa20.62■□□□□ 0.89
PHGDH-220ENST00000641570 PRG4Q92954 1404 aaPredicted RBP20.62■□□□□ 0.89
PHGDH-220ENST00000641570 EFCAB5A4FU69 1503 aa20.61■□□□□ 0.89
PHGDH-220ENST00000641570 UGGT2Q9NYU1 1516 aa20.6■□□□□ 0.89
PHGDH-220ENST00000641570 TTBK1Q5TCY1 1321 aaPredicted RBP20.58■□□□□ 0.89
PHGDH-220ENST00000641570 P3H3Q8IVL6 736 aa20.57■□□□□ 0.88
PHGDH-220ENST00000641570 SHROOM2Q13796 1616 aa20.54■□□□□ 0.88
PHGDH-220ENST00000641570 KIAA0556O60303 1618 aa20.53■□□□□ 0.88
PHGDH-220ENST00000641570 FHOD3Q2V2M9 1422 aa20.5■□□□□ 0.87
PHGDH-220ENST00000641570 SAMD9Q5K651 1589 aa20.49■□□□□ 0.87
PHGDH-220ENST00000641570 ARHGAP35Q9NRY4 1499 aa20.49■□□□□ 0.87
PHGDH-220ENST00000641570 DISP1Q96F81 1524 aa20.48■□□□□ 0.87
PHGDH-220ENST00000641570 PTPRGP23470 1445 aa20.47■□□□□ 0.87
PHGDH-220ENST00000641570 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
PHGDH-220ENST00000641570 ARHGEF11O15085 1522 aa20.46■□□□□ 0.87
PHGDH-220ENST00000641570 ATP1B4Q9UN42 357 aaPredicted RBP20.44■□□□□ 0.86
PHGDH-220ENST00000641570 ERCC6L2Q5T890 1561 aa20.39■□□□□ 0.85
PHGDH-220ENST00000641570 APLP2Q06481 763 aa20.39■□□□□ 0.85
PHGDH-220ENST00000641570 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
PHGDH-220ENST00000641570 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
PHGDH-220ENST00000641570 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
PHGDH-220ENST00000641570 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
PHGDH-220ENST00000641570 VPS8Q8N3P4 1428 aa20.35■□□□□ 0.85
PHGDH-220ENST00000641570 CYB5RLQ6IPT4 315 aa20.34■□□□□ 0.85
PHGDH-220ENST00000641570 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.33■□□□□ 0.85
PHGDH-220ENST00000641570 NPM1P06748 294 aaKnown RBP eCLIP20.33■□□□□ 0.85
PHGDH-220ENST00000641570 HNRNPUL2Q1KMD3 747 aaKnown RBP20.33■□□□□ 0.85
PHGDH-220ENST00000641570 UACAQ9BZF9 1416 aa20.32■□□□□ 0.84
PHGDH-220ENST00000641570 HECW1Q76N89 1606 aa20.28■□□□□ 0.84
PHGDH-220ENST00000641570 FYCO1Q9BQS8 1478 aa20.28■□□□□ 0.84
PHGDH-220ENST00000641570 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
PHGDH-220ENST00000641570 RAPGEF6Q8TEU7 1601 aa20.27■□□□□ 0.84
PHGDH-220ENST00000641570 PLB1Q6P1J6 1458 aa20.27■□□□□ 0.84
PHGDH-220ENST00000641570 ARID3CA6NKF2 412 aa20.25■□□□□ 0.83
PHGDH-220ENST00000641570 PCF11O94913 1555 aaKnown RBP20.25■□□□□ 0.83
PHGDH-220ENST00000641570 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
PHGDH-220ENST00000641570 CDK11AQ9UQ88 783 aaPredicted RBP20.23■□□□□ 0.83
PHGDH-220ENST00000641570 CCDC18Q5T9S5 1454 aa20.23■□□□□ 0.83
PHGDH-220ENST00000641570 ABCA8O94911 1581 aa20.21■□□□□ 0.83
PHGDH-220ENST00000641570 UHRF1BP1LA0JNW5 1464 aa20.21■□□□□ 0.83
PHGDH-220ENST00000641570 NUP153P49790 1475 aaKnown RBP20.16■□□□□ 0.82
PHGDH-220ENST00000641570 ADCY10Q96PN6 1610 aa20.14■□□□□ 0.81
PHGDH-220ENST00000641570 EPRSP07814 1512 aaKnown RBP20.14■□□□□ 0.81
PHGDH-220ENST00000641570 PLEKHD1A6NEE1 506 aa20.13■□□□□ 0.81
PHGDH-220ENST00000641570 MTUS2Q5JR59 1369 aa20.11■□□□□ 0.81
PHGDH-220ENST00000641570 CDK13Q14004 1512 aaKnown RBP20.1■□□□□ 0.81
PHGDH-220ENST00000641570 KDM5BQ9UGL1 1544 aa20.09■□□□□ 0.81
PHGDH-220ENST00000641570 ATP10BO94823 1461 aa20.07■□□□□ 0.8
PHGDH-220ENST00000641570 ZCCHC11Q5TAX3 1644 aaKnown RBP20.06■□□□□ 0.8
PHGDH-220ENST00000641570 TIAM1Q13009 1591 aa20.05■□□□□ 0.8
PHGDH-220ENST00000641570 MAP3K1Q13233 1512 aa20.05■□□□□ 0.8
PHGDH-220ENST00000641570 CFAP43Q8NDM7 1665 aa20.03■□□□□ 0.8
PHGDH-220ENST00000641570 EHBP1L1Q8N3D4 1523 aa20.01■□□□□ 0.79
PHGDH-220ENST00000641570 ASXL2Q76L83 1435 aa20.01■□□□□ 0.79
PHGDH-220ENST00000641570 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
PHGDH-220ENST00000641570 KCNH8Q96L42 1107 aa20■□□□□ 0.79
PHGDH-220ENST00000641570 TROQ12816 1431 aaPredicted RBP19.99■□□□□ 0.79
PHGDH-220ENST00000641570 LRRC9Q6ZRR7 1453 aa19.98■□□□□ 0.79
PHGDH-220ENST00000641570 MAPKBP1O60336 1514 aa19.97■□□□□ 0.79
PHGDH-220ENST00000641570 KIF14Q15058 1648 aa19.95■□□□□ 0.78
PHGDH-220ENST00000641570 PPARGC1BQ86YN6 1023 aaKnown RBP19.95■□□□□ 0.78
PHGDH-220ENST00000641570 LRRIQ1Q96JM4 1722 aa19.93■□□□□ 0.78
PHGDH-220ENST00000641570 KANK4Q5T7N3 995 aaPredicted RBP19.91■□□□□ 0.78
PHGDH-220ENST00000641570 SUPT6HQ7KZ85 1726 aaKnown RBP19.9■□□□□ 0.78
PHGDH-220ENST00000641570 TRHP20396 242 aaPredicted RBP19.9■□□□□ 0.78
PHGDH-220ENST00000641570 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
PHGDH-220ENST00000641570 FAM69CQ0P6D2 419 aa19.88■□□□□ 0.77
PHGDH-220ENST00000641570 MAGI3Q5TCQ9 1506 aa19.86■□□□□ 0.77
PHGDH-220ENST00000641570 NCOA2Q15596 1464 aa19.85■□□□□ 0.77
PHGDH-220ENST00000641570 ABCC10Q5T3U5 1492 aa19.83■□□□□ 0.76
PHGDH-220ENST00000641570 CD109Q6YHK3 1445 aa19.79■□□□□ 0.76
PHGDH-220ENST00000641570 CFDP1Q9UEE9 299 aaPredicted RBP19.79■□□□□ 0.76
PHGDH-220ENST00000641570 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.78■□□□□ 0.766e-6■■■■■ 38.2
PHGDH-220ENST00000641570 DIP2BQ9P265 1576 aa19.78■□□□□ 0.76
PHGDH-220ENST00000641570 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
PHGDH-220ENST00000641570 ITSN2Q9NZM3 1697 aa19.76■□□□□ 0.75
PHGDH-220ENST00000641570 GLI2P10070 1586 aa19.76■□□□□ 0.75
PHGDH-220ENST00000641570 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
PHGDH-220ENST00000641570 MYOM3Q5VTT5 1437 aa19.76■□□□□ 0.75
PHGDH-220ENST00000641570 TTC37Q6PGP7 1564 aa19.75■□□□□ 0.75
PHGDH-220ENST00000641570 EFCAB2Q5VUJ9 269 aa19.75■□□□□ 0.75
PHGDH-220ENST00000641570 ABCA9Q8IUA7 1624 aa19.75■□□□□ 0.75
PHGDH-220ENST00000641570 TEX14Q8IWB6 1497 aa19.73■□□□□ 0.75
PHGDH-220ENST00000641570 PHLDB1Q86UU1 1377 aa19.72■□□□□ 0.75
PHGDH-220ENST00000641570 FAM50AQ14320 339 aaKnown RBP19.72■□□□□ 0.75
PHGDH-220ENST00000641570 MYO5CQ9NQX4 1742 aa19.72■□□□□ 0.75
PHGDH-220ENST00000641570 PLCH2O75038 1416 aa19.71■□□□□ 0.75
PHGDH-220ENST00000641570 GPATCH8Q9UKJ3 1502 aaKnown RBP19.71■□□□□ 0.75
PHGDH-220ENST00000641570 MIA2Q96PC5 1412 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms