RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 JPH4Q96JJ6 628 aa29.25■■■□□ 2.27
PHGDH-213ENST00000641272 IGF1RP08069 1367 aa29.22■■■□□ 2.27
PHGDH-213ENST00000641272 KIF13AQ9H1H9 1805 aa29.2■■■□□ 2.27
PHGDH-213ENST00000641272 KIAA0586Q9BVV6 1533 aa29.15■■■□□ 2.26
PHGDH-213ENST00000641272 ADCY10Q96PN6 1610 aa29.13■■■□□ 2.25
PHGDH-213ENST00000641272 CARMIL1Q5VZK9 1371 aa29.06■■■□□ 2.24
PHGDH-213ENST00000641272 MAPKBP1O60336 1514 aa29■■■□□ 2.23
PHGDH-213ENST00000641272 IQGAP2Q13576 1575 aa29■■■□□ 2.23
PHGDH-213ENST00000641272 DIP2BQ9P265 1576 aa28.99■■■□□ 2.23
PHGDH-213ENST00000641272 ABCC10Q5T3U5 1492 aa28.95■■■□□ 2.22
PHGDH-213ENST00000641272 TTBK1Q5TCY1 1321 aaPredicted RBP28.94■■■□□ 2.22
PHGDH-213ENST00000641272 NPM1P06748 294 aaKnown RBP eCLIP28.93■■■□□ 2.22
PHGDH-213ENST00000641272 FAM69CQ0P6D2 419 aa28.89■■■□□ 2.22
PHGDH-213ENST00000641272 PTPRGP23470 1445 aa28.87■■■□□ 2.21
PHGDH-213ENST00000641272 CARMIL2Q6F5E8 1435 aa28.86■■■□□ 2.21
PHGDH-213ENST00000641272 TSPOAP1O95153 1857 aa28.85■■■□□ 2.21
PHGDH-213ENST00000641272 RAPGEF2Q9Y4G8 1499 aa28.84■■■□□ 2.21
PHGDH-213ENST00000641272 AEBP2Q6ZN18 517 aaPredicted RBP28.83■■■□□ 2.21
PHGDH-213ENST00000641272 TNIKQ9UKE5 1360 aa28.83■■■□□ 2.21
PHGDH-213ENST00000641272 DISP1Q96F81 1524 aa28.81■■■□□ 2.2
PHGDH-213ENST00000641272 ABCC2Q92887 1545 aa28.77■■■□□ 2.2
PHGDH-213ENST00000641272 CTTNBP2Q8WZ74 1663 aa28.76■■■□□ 2.19
PHGDH-213ENST00000641272 KIAA0556O60303 1618 aa28.76■■■□□ 2.19
PHGDH-213ENST00000641272 UGGT2Q9NYU1 1516 aa28.74■■■□□ 2.19
PHGDH-213ENST00000641272 KDM6BO15054 1643 aa28.73■■■□□ 2.19
PHGDH-213ENST00000641272 ASXL2Q76L83 1435 aa28.68■■■□□ 2.18
PHGDH-213ENST00000641272 UACAQ9BZF9 1416 aa28.68■■■□□ 2.18
PHGDH-213ENST00000641272 UHRF1BP1LA0JNW5 1464 aa28.67■■■□□ 2.18
PHGDH-213ENST00000641272 ZCCHC11Q5TAX3 1644 aaKnown RBP28.64■■■□□ 2.18
PHGDH-213ENST00000641272 PPRC1Q5VV67 1664 aaKnown RBP28.61■■■□□ 2.17
PHGDH-213ENST00000641272 PLB1Q6P1J6 1458 aa28.6■■■□□ 2.17
PHGDH-213ENST00000641272 KDM5BQ9UGL1 1544 aa28.57■■■□□ 2.16
PHGDH-213ENST00000641272 GLI2P10070 1586 aa28.57■■■□□ 2.16
PHGDH-213ENST00000641272 PRXQ9BXM0 1461 aa28.53■■■□□ 2.16
PHGDH-213ENST00000641272 EPRSP07814 1512 aaKnown RBP28.5■■■□□ 2.15
PHGDH-213ENST00000641272 MAP3K4Q9Y6R4 1608 aa28.49■■■□□ 2.15
PHGDH-213ENST00000641272 GOLGA3Q08378 1498 aa28.48■■■□□ 2.15
PHGDH-213ENST00000641272 ABCA8O94911 1581 aa28.43■■■□□ 2.14
PHGDH-213ENST00000641272 WDR7Q9Y4E6 1490 aa28.41■■■□□ 2.14
PHGDH-213ENST00000641272 TEX14Q8IWB6 1497 aa28.33■■■□□ 2.13
PHGDH-213ENST00000641272 COL17A1Q9UMD9 1497 aaPredicted RBP28.33■■■□□ 2.13
PHGDH-213ENST00000641272 KDM4FA0A1W2PPD8 638 aa28.29■■■□□ 2.12
PHGDH-213ENST00000641272 CFAP43Q8NDM7 1665 aa28.29■■■□□ 2.12
PHGDH-213ENST00000641272 P3H3Q8IVL6 736 aa28.28■■■□□ 2.12
PHGDH-213ENST00000641272 SAMD9Q5K651 1589 aa28.28■■■□□ 2.12
PHGDH-213ENST00000641272 ARID3CA6NKF2 412 aa28.26■■■□□ 2.11
PHGDH-213ENST00000641272 CSRNP3Q8WYN3 585 aa28.24■■■□□ 2.11
PHGDH-213ENST00000641272 KCNH8Q96L42 1107 aa28.21■■■□□ 2.11
PHGDH-213ENST00000641272 ADGRL1O94910 1474 aa28.2■■■□□ 2.1
PHGDH-213ENST00000641272 CD109Q6YHK3 1445 aa28.18■■■□□ 2.1
PHGDH-213ENST00000641272 RAPGEF6Q8TEU7 1601 aa28.18■■■□□ 2.1
PHGDH-213ENST00000641272 EEA1Q15075 1411 aa28.17■■■□□ 2.1
PHGDH-213ENST00000641272 MAGI3Q5TCQ9 1506 aa28.16■■■□□ 2.1
PHGDH-213ENST00000641272 RANGAP1P46060 587 aaPredicted RBP28.15■■■□□ 2.1
PHGDH-213ENST00000641272 FAM9AQ8IZU1 332 aaPredicted RBP28.15■■■□□ 2.1
PHGDH-213ENST00000641272 ATP10BO94823 1461 aa28.14■■■□□ 2.09
PHGDH-213ENST00000641272 FHOD3Q2V2M9 1422 aa28.1■■■□□ 2.09
PHGDH-213ENST00000641272 KIF21BO75037 1637 aa28.07■■■□□ 2.08
PHGDH-213ENST00000641272 ABCA9Q8IUA7 1624 aa28.06■■■□□ 2.08
PHGDH-213ENST00000641272 NUP153P49790 1475 aaKnown RBP28.03■■■□□ 2.08
PHGDH-213ENST00000641272 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.98■■■□□ 2.07
PHGDH-213ENST00000641272 HNRNPUL2Q1KMD3 747 aaKnown RBP27.98■■■□□ 2.07
PHGDH-213ENST00000641272 EFCAB5A4FU69 1503 aa27.96■■■□□ 2.07
PHGDH-213ENST00000641272 EHMT2Q96KQ7 1210 aa27.95■■■□□ 2.06
PHGDH-213ENST00000641272 ARAP3Q8WWN8 1544 aa27.92■■■□□ 2.06
PHGDH-213ENST00000641272 FRMPD1Q5SYB0 1578 aa27.86■■■□□ 2.05
PHGDH-213ENST00000641272 CDK13Q14004 1512 aaKnown RBP27.85■■■□□ 2.05
PHGDH-213ENST00000641272 HECW2Q9P2P5 1572 aa27.84■■■□□ 2.05
PHGDH-213ENST00000641272 NEO1Q92859 1461 aa27.83■■■□□ 2.05
PHGDH-213ENST00000641272 TTC37Q6PGP7 1564 aa27.82■■■□□ 2.04
PHGDH-213ENST00000641272 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.78■■■□□ 2.046e-6■■■■■ 38.2
PHGDH-213ENST00000641272 RAPGEF3O95398 923 aa27.78■■■□□ 2.04
PHGDH-213ENST00000641272 CHIC1Q5VXU3 224 aa27.78■■■□□ 2.04
PHGDH-213ENST00000641272 PHLDB1Q86UU1 1377 aa27.76■■■□□ 2.03
PHGDH-213ENST00000641272 UBTFP17480 764 aaKnown RBP27.75■■■□□ 2.03
PHGDH-213ENST00000641272 HECW1Q76N89 1606 aa27.74■■■□□ 2.03
PHGDH-213ENST00000641272 CFAP74Q9C0B2 1584 aa27.74■■■□□ 2.03
PHGDH-213ENST00000641272 RICTORQ6R327 1708 aa27.73■■■□□ 2.03
PHGDH-213ENST00000641272 ARHGAP35Q9NRY4 1499 aa27.73■■■□□ 2.03
PHGDH-213ENST00000641272 PLEKHD1A6NEE1 506 aa27.73■■■□□ 2.03
PHGDH-213ENST00000641272 ARHGEF40Q8TER5 1519 aa27.72■■■□□ 2.03
PHGDH-213ENST00000641272 FANCAO15360 1455 aa27.7■■■□□ 2.02
PHGDH-213ENST00000641272 ADAMTSL3P82987 1691 aa27.68■■■□□ 2.02
PHGDH-213ENST00000641272 DENND4BO75064 1496 aaPredicted RBP27.66■■■□□ 2.02
PHGDH-213ENST00000641272 BCORL1Q5H9F3 1711 aa27.66■■■□□ 2.02
PHGDH-213ENST00000641272 AKNAQ7Z591 1439 aa27.66■■■□□ 2.02
PHGDH-213ENST00000641272 ATP1B4Q9UN42 357 aaPredicted RBP27.65■■■□□ 2.02
PHGDH-213ENST00000641272 FMN1Q68DA7 1419 aa27.65■■■□□ 2.02
PHGDH-213ENST00000641272 MADDQ8WXG6 1647 aa27.63■■■□□ 2.01
PHGDH-213ENST00000641272 LRRIQ1Q96JM4 1722 aa27.63■■■□□ 2.01
PHGDH-213ENST00000641272 KIF14Q15058 1648 aa27.61■■■□□ 2.01
PHGDH-213ENST00000641272 MYO5CQ9NQX4 1742 aa27.6■■■□□ 2.01
PHGDH-213ENST00000641272 PTPRMP28827 1452 aa27.58■■■□□ 2.01
PHGDH-213ENST00000641272 ZMYM4Q5VZL5 1548 aa27.58■■■□□ 2.01
PHGDH-213ENST00000641272 ARID4BQ4LE39 1312 aaPredicted RBP27.58■■■□□ 2.01
PHGDH-213ENST00000641272 RIMS1Q86UR5 1692 aaKnown RBP27.56■■■□□ 2
PHGDH-213ENST00000641272 SIGLEC1Q9BZZ2 1709 aa27.56■■■□□ 2
PHGDH-213ENST00000641272 ZFYVE16Q7Z3T8 1539 aa27.56■■■□□ 2
PHGDH-213ENST00000641272 PCF11O94913 1555 aaKnown RBP27.55■■■□□ 2
PHGDH-213ENST00000641272 YEATS2Q9ULM3 1422 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms