RNA–Protein interactions for RNA: ENST00000640892.1

GABRD-217, Transcript of gamma-aminobutyric acid type A receptor delta subunit, humanhuman

TSL 5

Gene GABRD, Length 2,036 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRD-217ENST00000640892 CFAP43Q8NDM7 1665 aa28.54■■■□□ 2.16
GABRD-217ENST00000640892 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
GABRD-217ENST00000640892 GAPVD1Q14C86 1478 aa28.52■■■□□ 2.16
GABRD-217ENST00000640892 EFCAB5A4FU69 1503 aa28.52■■■□□ 2.16
GABRD-217ENST00000640892 FHAD1B1AJZ9 1412 aa28.47■■■□□ 2.15
GABRD-217ENST00000640892 FHOD3Q2V2M9 1422 aa28.46■■■□□ 2.15
GABRD-217ENST00000640892 PBRM1Q86U86 1689 aa28.44■■■□□ 2.14
GABRD-217ENST00000640892 P3H3Q8IVL6 736 aa28.43■■■□□ 2.14
GABRD-217ENST00000640892 LRRC9Q6ZRR7 1453 aa28.43■■■□□ 2.14
GABRD-217ENST00000640892 CCNB3Q8WWL7 1395 aa28.4■■■□□ 2.14
GABRD-217ENST00000640892 SAMD9Q5K651 1589 aa28.38■■■□□ 2.13
GABRD-217ENST00000640892 MRC2Q9UBG0 1479 aa28.37■■■□□ 2.13
GABRD-217ENST00000640892 FYCO1Q9BQS8 1478 aa28.37■■■□□ 2.13
GABRD-217ENST00000640892 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.13
GABRD-217ENST00000640892 CASKIN1Q8WXD9 1431 aa28.33■■■□□ 2.12
GABRD-217ENST00000640892 LRRIQ1Q96JM4 1722 aa28.31■■■□□ 2.12
GABRD-217ENST00000640892 DHX57Q6P158 1386 aaKnown RBP28.28■■■□□ 2.12
GABRD-217ENST00000640892 SNAPC4Q5SXM2 1469 aa28.27■■■□□ 2.12
GABRD-217ENST00000640892 PHLDB1Q86UU1 1377 aa28.26■■■□□ 2.12
GABRD-217ENST00000640892 ADAMTS12P58397 1594 aa28.25■■■□□ 2.11
GABRD-217ENST00000640892 FMN1Q68DA7 1419 aa28.23■■■□□ 2.11
GABRD-217ENST00000640892 WDR62O43379 1518 aa28.22■■■□□ 2.11
GABRD-217ENST00000640892 ATP1B4Q9UN42 357 aaPredicted RBP28.19■■■□□ 2.1
GABRD-217ENST00000640892 DIEXFQ68CQ4 756 aaKnown RBP28.16■■■□□ 2.1
GABRD-217ENST00000640892 CLSPNQ9HAW4 1339 aa28.16■■■□□ 2.1
GABRD-217ENST00000640892 ZNF316A6NFI3 1004 aaPredicted RBP28.15■■■□□ 2.1
GABRD-217ENST00000640892 ITGAEP38570 1179 aa28.14■■■□□ 2.1
GABRD-217ENST00000640892 GRIN2BQ13224 1484 aa28.13■■■□□ 2.09
GABRD-217ENST00000640892 IFT140Q96RY7 1462 aa28.12■■■□□ 2.09
GABRD-217ENST00000640892 ZNF608Q9ULD9 1512 aaPredicted RBP28.12■■■□□ 2.09
GABRD-217ENST00000640892 IQGAP2Q13576 1575 aa28.1■■■□□ 2.09
GABRD-217ENST00000640892 THOC2Q8NI27 1593 aaKnown RBP28.09■■■□□ 2.09
GABRD-217ENST00000640892 RAB3GAP2Q9H2M9 1393 aa28.05■■■□□ 2.08
GABRD-217ENST00000640892 EIF4G3O43432 1585 aaKnown RBP28.02■■■□□ 2.08
GABRD-217ENST00000640892 FAM50AQ14320 339 aaKnown RBP28■■■□□ 2.07
GABRD-217ENST00000640892 SETD5Q9C0A6 1442 aa27.99■■■□□ 2.07
GABRD-217ENST00000640892 SUPT6HQ7KZ85 1726 aaKnown RBP27.97■■■□□ 2.07
GABRD-217ENST00000640892 MAPKBP1O60336 1514 aa27.96■■■□□ 2.07
GABRD-217ENST00000640892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.96■■■□□ 2.07
GABRD-217ENST00000640892 MTUS2Q5JR59 1369 aa27.95■■■□□ 2.07
GABRD-217ENST00000640892 FGD6Q6ZV73 1430 aa27.95■■■□□ 2.07
GABRD-217ENST00000640892 ERCC6Q03468 1493 aa27.95■■■□□ 2.06
GABRD-217ENST00000640892 EHBP1L1Q8N3D4 1523 aa27.94■■■□□ 2.06
GABRD-217ENST00000640892 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
GABRD-217ENST00000640892 HECW1Q76N89 1606 aa27.93■■■□□ 2.06
GABRD-217ENST00000640892 MAGI3Q5TCQ9 1506 aa27.93■■■□□ 2.06
GABRD-217ENST00000640892 NCOA2Q15596 1464 aa27.91■■■□□ 2.06
GABRD-217ENST00000640892 CCDC18Q5T9S5 1454 aa27.89■■■□□ 2.05
GABRD-217ENST00000640892 ARHGEF11O15085 1522 aa27.86■■■□□ 2.05
GABRD-217ENST00000640892 GRIN2AQ12879 1464 aa27.84■■■□□ 2.05
GABRD-217ENST00000640892 KIAA0556O60303 1618 aa27.83■■■□□ 2.05
GABRD-217ENST00000640892 KIAA0586Q9BVV6 1533 aa27.83■■■□□ 2.05
GABRD-217ENST00000640892 MYOM3Q5VTT5 1437 aa27.83■■■□□ 2.05
GABRD-217ENST00000640892 EPRSP07814 1512 aaKnown RBP27.82■■■□□ 2.04
GABRD-217ENST00000640892 DISP1Q96F81 1524 aa27.8■■■□□ 2.04
GABRD-217ENST00000640892 PTPN23Q9H3S7 1636 aa27.79■■■□□ 2.04
GABRD-217ENST00000640892 CDK13Q14004 1512 aaKnown RBP27.79■■■□□ 2.04
GABRD-217ENST00000640892 PTPRKQ15262 1439 aa27.78■■■□□ 2.04
GABRD-217ENST00000640892 MAGI1Q96QZ7 1491 aaPredicted RBP27.77■■■□□ 2.04
GABRD-217ENST00000640892 CEP170Q5SW79 1584 aa27.74■■■□□ 2.03
GABRD-217ENST00000640892 SYNJ2O15056 1496 aa27.69■■■□□ 2.02
GABRD-217ENST00000640892 RAPGEF6Q8TEU7 1601 aa27.68■■■□□ 2.02
GABRD-217ENST00000640892 HFM1A2PYH4 1435 aa27.67■■■□□ 2.02
GABRD-217ENST00000640892 TCOF1Q13428 1488 aaKnown RBP27.66■■■□□ 2.02
GABRD-217ENST00000640892 MIER1Q8N108 512 aa27.65■■■□□ 2.02
GABRD-217ENST00000640892 SCAF1Q9H7N4 1312 aaKnown RBP27.65■■■□□ 2.02
GABRD-217ENST00000640892 NUP153P49790 1475 aaKnown RBP27.62■■■□□ 2.01
GABRD-217ENST00000640892 NAIPQ13075 1403 aa27.6■■■□□ 2.01
GABRD-217ENST00000640892 GCC2Q8IWJ2 1684 aa27.6■■■□□ 2.01
GABRD-217ENST00000640892 ACIN1Q9UKV3 1341 aaKnown RBP27.6■■■□□ 2.01
GABRD-217ENST00000640892 ARID3CA6NKF2 412 aa27.6■■■□□ 2.01
GABRD-217ENST00000640892 SIN3AQ96ST3 1273 aa27.6■■■□□ 2.01
GABRD-217ENST00000640892 NEUROD1Q13562 356 aa27.59■■■□□ 2.01
GABRD-217ENST00000640892 CHMP7Q8WUX9 453 aaPredicted RBP27.57■■■□□ 2
GABRD-217ENST00000640892 NUP160Q12769 1436 aa27.56■■■□□ 2
GABRD-217ENST00000640892 MIA2Q96PC5 1412 aa27.54■■■□□ 2
GABRD-217ENST00000640892 UACAQ9BZF9 1416 aa27.53■■■□□ 2
GABRD-217ENST00000640892 FBLN2P98095 1184 aa27.48■■□□□ 1.99
GABRD-217ENST00000640892 CENPBP07199 599 aaPredicted RBP27.48■■□□□ 1.99
GABRD-217ENST00000640892 KDM6BO15054 1643 aa27.47■■□□□ 1.99
GABRD-217ENST00000640892 PLB1Q6P1J6 1458 aa27.45■■□□□ 1.99
GABRD-217ENST00000640892 AKNAQ7Z591 1439 aa27.44■■□□□ 1.98
GABRD-217ENST00000640892 TIMELESSQ9UNS1 1208 aa27.42■■□□□ 1.98
GABRD-217ENST00000640892 DNMT1P26358 1616 aaKnown RBP27.41■■□□□ 1.98
GABRD-217ENST00000640892 ADCY10Q96PN6 1610 aa27.41■■□□□ 1.98
GABRD-217ENST00000640892 RRP7BPQ9NSQ0 103 aa27.4■■□□□ 1.98
GABRD-217ENST00000640892 CHIC2Q9UKJ5 165 aa27.4■■□□□ 1.98
GABRD-217ENST00000640892 CARMIL2Q6F5E8 1435 aa27.39■■□□□ 1.98
GABRD-217ENST00000640892 JPH4Q96JJ6 628 aa27.39■■□□□ 1.98
GABRD-217ENST00000640892 KIF14Q15058 1648 aa27.38■■□□□ 1.97
GABRD-217ENST00000640892 PRG4Q92954 1404 aaPredicted RBP27.37■■□□□ 1.97
GABRD-217ENST00000640892 YTHDC1Q96MU7 727 aaKnown RBP27.36■■□□□ 1.97
GABRD-217ENST00000640892 TROQ12816 1431 aaPredicted RBP27.36■■□□□ 1.97
GABRD-217ENST00000640892 ITSN2Q9NZM3 1697 aa27.36■■□□□ 1.97
GABRD-217ENST00000640892 CHD1O14646 1710 aa27.35■■□□□ 1.97
GABRD-217ENST00000640892 ABCA8O94911 1581 aa27.35■■□□□ 1.97
GABRD-217ENST00000640892 DENND4BO75064 1496 aaPredicted RBP27.34■■□□□ 1.97
GABRD-217ENST00000640892 DAPK1P53355 1430 aa27.34■■□□□ 1.97
GABRD-217ENST00000640892 PPP1R15AO75807 674 aaPredicted RBP27.33■■□□□ 1.97
GABRD-217ENST00000640892 CDK11AQ9UQ88 783 aaPredicted RBP27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms