RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 KIF13AQ9H1H9 1805 aa20.39■□□□□ 0.85
ERGIC3-220ENST00000640748 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
ERGIC3-220ENST00000640748 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
ERGIC3-220ENST00000640748 KIF27Q86VH2 1401 aa20.35■□□□□ 0.85
ERGIC3-220ENST00000640748 ADCY10Q96PN6 1610 aa20.31■□□□□ 0.84
ERGIC3-220ENST00000640748 ABCC10Q5T3U5 1492 aa20.3■□□□□ 0.84
ERGIC3-220ENST00000640748 MAPKBP1O60336 1514 aa20.3■□□□□ 0.84
ERGIC3-220ENST00000640748 CUL7Q14999 1698 aa20.29■□□□□ 0.84
ERGIC3-220ENST00000640748 FAM69CQ0P6D2 419 aa20.27■□□□□ 0.84
ERGIC3-220ENST00000640748 DIP2BQ9P265 1576 aa20.25■□□□□ 0.83
ERGIC3-220ENST00000640748 NPM1P06748 294 aaKnown RBP eCLIP20.24■□□□□ 0.83
ERGIC3-220ENST00000640748 CARMIL1Q5VZK9 1371 aa20.23■□□□□ 0.83
ERGIC3-220ENST00000640748 PTPRGP23470 1445 aa20.18■□□□□ 0.82
ERGIC3-220ENST00000640748 TNIKQ9UKE5 1360 aa20.12■□□□□ 0.81
ERGIC3-220ENST00000640748 IQGAP2Q13576 1575 aa20.11■□□□□ 0.81
ERGIC3-220ENST00000640748 CARMIL2Q6F5E8 1435 aa20.1■□□□□ 0.81
ERGIC3-220ENST00000640748 ABCC2Q92887 1545 aa20.1■□□□□ 0.81
ERGIC3-220ENST00000640748 TTBK1Q5TCY1 1321 aaPredicted RBP20.09■□□□□ 0.81
ERGIC3-220ENST00000640748 DISP1Q96F81 1524 aa20.08■□□□□ 0.81
ERGIC3-220ENST00000640748 KDM6BO15054 1643 aa20.05■□□□□ 0.8
ERGIC3-220ENST00000640748 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
ERGIC3-220ENST00000640748 ASXL2Q76L83 1435 aa20.04■□□□□ 0.8
ERGIC3-220ENST00000640748 TSPOAP1O95153 1857 aa20.04■□□□□ 0.8
ERGIC3-220ENST00000640748 RAPGEF2Q9Y4G8 1499 aa20.03■□□□□ 0.8
ERGIC3-220ENST00000640748 UACAQ9BZF9 1416 aa20.02■□□□□ 0.8
ERGIC3-220ENST00000640748 UGGT2Q9NYU1 1516 aa20.02■□□□□ 0.79
ERGIC3-220ENST00000640748 PLB1Q6P1J6 1458 aa20■□□□□ 0.79
ERGIC3-220ENST00000640748 KDM4FA0A1W2PPD8 638 aa20■□□□□ 0.79
ERGIC3-220ENST00000640748 GLI2P10070 1586 aa20■□□□□ 0.79
ERGIC3-220ENST00000640748 PPRC1Q5VV67 1664 aaKnown RBP19.97■□□□□ 0.79
ERGIC3-220ENST00000640748 KDM5BQ9UGL1 1544 aa19.97■□□□□ 0.79
ERGIC3-220ENST00000640748 KIAA0556O60303 1618 aa19.94■□□□□ 0.78
ERGIC3-220ENST00000640748 EPRSP07814 1512 aaKnown RBP19.92■□□□□ 0.78
ERGIC3-220ENST00000640748 CHIC1Q5VXU3 224 aa19.91■□□□□ 0.78
ERGIC3-220ENST00000640748 COL17A1Q9UMD9 1497 aaPredicted RBP19.91■□□□□ 0.78
ERGIC3-220ENST00000640748 ZCCHC11Q5TAX3 1644 aaKnown RBP19.89■□□□□ 0.77
ERGIC3-220ENST00000640748 MAP3K4Q9Y6R4 1608 aa19.87■□□□□ 0.77
ERGIC3-220ENST00000640748 PRXQ9BXM0 1461 aa19.84■□□□□ 0.77
ERGIC3-220ENST00000640748 CTTNBP2Q8WZ74 1663 aa19.82■□□□□ 0.76
ERGIC3-220ENST00000640748 WDR7Q9Y4E6 1490 aa19.82■□□□□ 0.76
ERGIC3-220ENST00000640748 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
ERGIC3-220ENST00000640748 ABCA8O94911 1581 aa19.79■□□□□ 0.76
ERGIC3-220ENST00000640748 GOLGA3Q08378 1498 aa19.79■□□□□ 0.76
ERGIC3-220ENST00000640748 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
ERGIC3-220ENST00000640748 MAGI3Q5TCQ9 1506 aa19.71■□□□□ 0.75
ERGIC3-220ENST00000640748 CD109Q6YHK3 1445 aa19.7■□□□□ 0.74
ERGIC3-220ENST00000640748 KCNH8Q96L42 1107 aa19.68■□□□□ 0.74
ERGIC3-220ENST00000640748 CFAP43Q8NDM7 1665 aa19.66■□□□□ 0.74
ERGIC3-220ENST00000640748 ATP10BO94823 1461 aa19.63■□□□□ 0.73
ERGIC3-220ENST00000640748 P3H3Q8IVL6 736 aa19.63■□□□□ 0.73
ERGIC3-220ENST00000640748 ARID3CA6NKF2 412 aa19.61■□□□□ 0.73
ERGIC3-220ENST00000640748 CSRNP3Q8WYN3 585 aa19.6■□□□□ 0.73
ERGIC3-220ENST00000640748 SAMD9Q5K651 1589 aa19.6■□□□□ 0.73
ERGIC3-220ENST00000640748 ARAP3Q8WWN8 1544 aa19.56■□□□□ 0.72
ERGIC3-220ENST00000640748 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
ERGIC3-220ENST00000640748 HECW2Q9P2P5 1572 aa19.53■□□□□ 0.72
ERGIC3-220ENST00000640748 RAPGEF6Q8TEU7 1601 aa19.51■□□□□ 0.71
ERGIC3-220ENST00000640748 NUP153P49790 1475 aaKnown RBP19.5■□□□□ 0.71
ERGIC3-220ENST00000640748 KIF21BO75037 1637 aa19.5■□□□□ 0.71
ERGIC3-220ENST00000640748 FAM9AQ8IZU1 332 aaPredicted RBP19.49■□□□□ 0.71
ERGIC3-220ENST00000640748 ILDR1Q86SU0 546 aaPredicted RBP19.48■□□□□ 0.71
ERGIC3-220ENST00000640748 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
ERGIC3-220ENST00000640748 EEA1Q15075 1411 aa19.47■□□□□ 0.71
ERGIC3-220ENST00000640748 FHOD3Q2V2M9 1422 aa19.46■□□□□ 0.71
ERGIC3-220ENST00000640748 NEO1Q92859 1461 aa19.44■□□□□ 0.7
ERGIC3-220ENST00000640748 RAPGEF3O95398 923 aa19.44■□□□□ 0.7
ERGIC3-220ENST00000640748 RANGAP1P46060 587 aaPredicted RBP19.43■□□□□ 0.7
ERGIC3-220ENST00000640748 FRMPD1Q5SYB0 1578 aa19.41■□□□□ 0.7
ERGIC3-220ENST00000640748 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.41■□□□□ 0.7
ERGIC3-220ENST00000640748 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
ERGIC3-220ENST00000640748 ADAMTSL3P82987 1691 aa19.37■□□□□ 0.69
ERGIC3-220ENST00000640748 PTPRMP28827 1452 aa19.35■□□□□ 0.69
ERGIC3-220ENST00000640748 EFCAB5A4FU69 1503 aa19.34■□□□□ 0.69
ERGIC3-220ENST00000640748 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.68
ERGIC3-220ENST00000640748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.33■□□□□ 0.686e-6■■■■□ 21.5
ERGIC3-220ENST00000640748 AKNAQ7Z591 1439 aa19.3■□□□□ 0.68
ERGIC3-220ENST00000640748 BCORL1Q5H9F3 1711 aa19.3■□□□□ 0.68
ERGIC3-220ENST00000640748 FANCAO15360 1455 aa19.29■□□□□ 0.68
ERGIC3-220ENST00000640748 DENND4BO75064 1496 aaPredicted RBP19.29■□□□□ 0.68
ERGIC3-220ENST00000640748 TTC37Q6PGP7 1564 aa19.29■□□□□ 0.68
ERGIC3-220ENST00000640748 ARHGEF40Q8TER5 1519 aa19.29■□□□□ 0.68
ERGIC3-220ENST00000640748 RICTORQ6R327 1708 aa19.28■□□□□ 0.68
ERGIC3-220ENST00000640748 CDK13Q14004 1512 aaKnown RBP19.28■□□□□ 0.68
ERGIC3-220ENST00000640748 MADDQ8WXG6 1647 aa19.26■□□□□ 0.67
ERGIC3-220ENST00000640748 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
ERGIC3-220ENST00000640748 ZMYM4Q5VZL5 1548 aa19.24■□□□□ 0.67
ERGIC3-220ENST00000640748 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
ERGIC3-220ENST00000640748 YEATS2Q9ULM3 1422 aa19.22■□□□□ 0.67
ERGIC3-220ENST00000640748 SIGLEC1Q9BZZ2 1709 aa19.21■□□□□ 0.67
ERGIC3-220ENST00000640748 PLCH2O75038 1416 aa19.2■□□□□ 0.66
ERGIC3-220ENST00000640748 LMTK3Q96Q04 1460 aa19.2■□□□□ 0.66
ERGIC3-220ENST00000640748 ARHGAP35Q9NRY4 1499 aa19.2■□□□□ 0.66
ERGIC3-220ENST00000640748 EHMT2Q96KQ7 1210 aa19.19■□□□□ 0.66
ERGIC3-220ENST00000640748 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
ERGIC3-220ENST00000640748 ZFYVE16Q7Z3T8 1539 aa19.18■□□□□ 0.66
ERGIC3-220ENST00000640748 UBTFP17480 764 aaKnown RBP19.17■□□□□ 0.66
ERGIC3-220ENST00000640748 FMN1Q68DA7 1419 aa19.17■□□□□ 0.66
ERGIC3-220ENST00000640748 POGZQ7Z3K3 1410 aa19.17■□□□□ 0.66
ERGIC3-220ENST00000640748 MAGI2Q86UL8 1455 aa19.16■□□□□ 0.66
ERGIC3-220ENST00000640748 HECW1Q76N89 1606 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 582.7 ms