RNA–Protein interactions for RNA: ENST00000640736.1

RTTN-221, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 1,132 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-221ENST00000640736 SHROOM2Q13796 1616 aa23.91■■□□□ 1.42
RTTN-221ENST00000640736 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
RTTN-221ENST00000640736 IGF1RP08069 1367 aa23.85■■□□□ 1.41
RTTN-221ENST00000640736 CUL7Q14999 1698 aa23.85■■□□□ 1.41
RTTN-221ENST00000640736 RUSC2Q8N2Y8 1516 aa23.83■■□□□ 1.41
RTTN-221ENST00000640736 PRG4Q92954 1404 aaPredicted RBP23.78■■□□□ 1.4
RTTN-221ENST00000640736 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
RTTN-221ENST00000640736 CARMIL1Q5VZK9 1371 aa23.72■■□□□ 1.39
RTTN-221ENST00000640736 KIAA0586Q9BVV6 1533 aa23.69■■□□□ 1.38
RTTN-221ENST00000640736 PLPPR3Q6T4P5 718 aa23.63■■□□□ 1.37
RTTN-221ENST00000640736 IQGAP2Q13576 1575 aa23.54■■□□□ 1.36
RTTN-221ENST00000640736 RAPGEF2Q9Y4G8 1499 aa23.54■■□□□ 1.36
RTTN-221ENST00000640736 ADCY10Q96PN6 1610 aa23.51■■□□□ 1.35
RTTN-221ENST00000640736 KIF13AQ9H1H9 1805 aa23.47■■□□□ 1.35
RTTN-221ENST00000640736 TTBK1Q5TCY1 1321 aaPredicted RBP23.47■■□□□ 1.35
RTTN-221ENST00000640736 NPM1P06748 294 aaKnown RBP eCLIP23.46■■□□□ 1.35
RTTN-221ENST00000640736 CARMIL2Q6F5E8 1435 aa23.46■■□□□ 1.35
RTTN-221ENST00000640736 PTPRGP23470 1445 aa23.44■■□□□ 1.34
RTTN-221ENST00000640736 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
RTTN-221ENST00000640736 CTTNBP2Q8WZ74 1663 aa23.4■■□□□ 1.34
RTTN-221ENST00000640736 MAPKBP1O60336 1514 aa23.39■■□□□ 1.34
RTTN-221ENST00000640736 DISP1Q96F81 1524 aa23.38■■□□□ 1.33
RTTN-221ENST00000640736 UGGT2Q9NYU1 1516 aa23.38■■□□□ 1.33
RTTN-221ENST00000640736 ABCC10Q5T3U5 1492 aa23.34■■□□□ 1.33
RTTN-221ENST00000640736 PRXQ9BXM0 1461 aa23.34■■□□□ 1.33
RTTN-221ENST00000640736 FAM69CQ0P6D2 419 aa23.33■■□□□ 1.33
RTTN-221ENST00000640736 KIAA0556O60303 1618 aa23.33■■□□□ 1.32
RTTN-221ENST00000640736 DIP2BQ9P265 1576 aa23.32■■□□□ 1.32
RTTN-221ENST00000640736 ABCC2Q92887 1545 aa23.28■■□□□ 1.32
RTTN-221ENST00000640736 UACAQ9BZF9 1416 aa23.27■■□□□ 1.32
RTTN-221ENST00000640736 UHRF1BP1LA0JNW5 1464 aa23.25■■□□□ 1.31
RTTN-221ENST00000640736 TSPOAP1O95153 1857 aa23.23■■□□□ 1.31
RTTN-221ENST00000640736 CSRNP3Q8WYN3 585 aa23.22■■□□□ 1.31
RTTN-221ENST00000640736 GOLGA3Q08378 1498 aa23.21■■□□□ 1.31
RTTN-221ENST00000640736 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
RTTN-221ENST00000640736 ZCCHC11Q5TAX3 1644 aaKnown RBP23.16■■□□□ 1.3
RTTN-221ENST00000640736 KDM5BQ9UGL1 1544 aa23.16■■□□□ 1.3
RTTN-221ENST00000640736 EEA1Q15075 1411 aa23.16■■□□□ 1.3
RTTN-221ENST00000640736 PLB1Q6P1J6 1458 aa23.15■■□□□ 1.3
RTTN-221ENST00000640736 FAM9AQ8IZU1 332 aaPredicted RBP23.14■■□□□ 1.29
RTTN-221ENST00000640736 ABCA8O94911 1581 aa23.09■■□□□ 1.29
RTTN-221ENST00000640736 GLI2P10070 1586 aa23.09■■□□□ 1.29
RTTN-221ENST00000640736 KDM6BO15054 1643 aa23.08■■□□□ 1.28
RTTN-221ENST00000640736 P3H3Q8IVL6 736 aa23.07■■□□□ 1.28
RTTN-221ENST00000640736 EPRSP07814 1512 aaKnown RBP23.04■■□□□ 1.28
RTTN-221ENST00000640736 PPRC1Q5VV67 1664 aaKnown RBP23.04■■□□□ 1.28
RTTN-221ENST00000640736 SAMD9Q5K651 1589 aa23.03■■□□□ 1.28
RTTN-221ENST00000640736 KIF21BO75037 1637 aa23■■□□□ 1.27
RTTN-221ENST00000640736 WDR7Q9Y4E6 1490 aa23■■□□□ 1.27
RTTN-221ENST00000640736 RANGAP1P46060 587 aaPredicted RBP23■■□□□ 1.27
RTTN-221ENST00000640736 MAP3K4Q9Y6R4 1608 aa23■■□□□ 1.27
RTTN-221ENST00000640736 PPP6R1Q9UPN7 881 aa22.96■■□□□ 1.27
RTTN-221ENST00000640736 ARID3CA6NKF2 412 aa22.95■■□□□ 1.26
RTTN-221ENST00000640736 EHMT2Q96KQ7 1210 aa22.92■■□□□ 1.26
RTTN-221ENST00000640736 KCNH8Q96L42 1107 aa22.92■■□□□ 1.26
RTTN-221ENST00000640736 RAPGEF6Q8TEU7 1601 aa22.91■■□□□ 1.26
RTTN-221ENST00000640736 FHOD3Q2V2M9 1422 aa22.9■■□□□ 1.26
RTTN-221ENST00000640736 TEX14Q8IWB6 1497 aa22.89■■□□□ 1.25
RTTN-221ENST00000640736 ATP10BO94823 1461 aa22.88■■□□□ 1.25
RTTN-221ENST00000640736 CFAP43Q8NDM7 1665 aa22.87■■□□□ 1.25
RTTN-221ENST00000640736 ADRA2BP18089 450 aa22.86■■□□□ 1.25
RTTN-221ENST00000640736 CD109Q6YHK3 1445 aa22.83■■□□□ 1.25
RTTN-221ENST00000640736 EFCAB5A4FU69 1503 aa22.83■■□□□ 1.25
RTTN-221ENST00000640736 UBTFP17480 764 aaKnown RBP22.83■■□□□ 1.25
RTTN-221ENST00000640736 COL17A1Q9UMD9 1497 aaPredicted RBP22.82■■□□□ 1.24
RTTN-221ENST00000640736 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.81■■□□□ 1.24
RTTN-221ENST00000640736 HNRNPUL2Q1KMD3 747 aaKnown RBP22.81■■□□□ 1.24
RTTN-221ENST00000640736 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
RTTN-221ENST00000640736 MAGI3Q5TCQ9 1506 aa22.78■■□□□ 1.24
RTTN-221ENST00000640736 ABCA9Q8IUA7 1624 aa22.73■■□□□ 1.23
RTTN-221ENST00000640736 KDM4FA0A1W2PPD8 638 aa22.68■■□□□ 1.22
RTTN-221ENST00000640736 PIAS4Q8N2W9 510 aaPredicted RBP22.68■■□□□ 1.22
RTTN-221ENST00000640736 ARHGAP35Q9NRY4 1499 aa22.67■■□□□ 1.22
RTTN-221ENST00000640736 PLEKHD1A6NEE1 506 aa22.64■■□□□ 1.21
RTTN-221ENST00000640736 CDK13Q14004 1512 aaKnown RBP22.63■■□□□ 1.21
RTTN-221ENST00000640736 POTEDQ86YR6 584 aa22.62■■□□□ 1.21
RTTN-221ENST00000640736 FMN1Q68DA7 1419 aa22.62■■□□□ 1.21
RTTN-221ENST00000640736 ATP1B4Q9UN42 357 aaPredicted RBP22.61■■□□□ 1.21
RTTN-221ENST00000640736 ARAP3Q8WWN8 1544 aa22.61■■□□□ 1.21
RTTN-221ENST00000640736 HECW1Q76N89 1606 aa22.6■■□□□ 1.21
RTTN-221ENST00000640736 ADGRL1O94910 1474 aa22.6■■□□□ 1.21
RTTN-221ENST00000640736 NEO1Q92859 1461 aa22.56■■□□□ 1.2
RTTN-221ENST00000640736 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.56■■□□□ 1.2
RTTN-221ENST00000640736 PHLDB1Q86UU1 1377 aa22.55■■□□□ 1.2
RTTN-221ENST00000640736 TTC37Q6PGP7 1564 aa22.55■■□□□ 1.2
RTTN-221ENST00000640736 MSH5O43196 834 aa22.52■■□□□ 1.2
RTTN-221ENST00000640736 RAPGEF3O95398 923 aa22.51■■□□□ 1.19
RTTN-221ENST00000640736 LRRIQ1Q96JM4 1722 aa22.51■■□□□ 1.19
RTTN-221ENST00000640736 FRMPD1Q5SYB0 1578 aa22.48■■□□□ 1.19
RTTN-221ENST00000640736 CFAP74Q9C0B2 1584 aa22.48■■□□□ 1.19
RTTN-221ENST00000640736 FANCAO15360 1455 aa22.47■■□□□ 1.19
RTTN-221ENST00000640736 PCF11O94913 1555 aaKnown RBP22.46■■□□□ 1.19
RTTN-221ENST00000640736 CDK11AQ9UQ88 783 aaPredicted RBP22.45■■□□□ 1.18
RTTN-221ENST00000640736 AKNAQ7Z591 1439 aa22.45■■□□□ 1.18
RTTN-221ENST00000640736 KIF14Q15058 1648 aa22.43■■□□□ 1.18
RTTN-221ENST00000640736 RICTORQ6R327 1708 aa22.42■■□□□ 1.18
RTTN-221ENST00000640736 MYO5CQ9NQX4 1742 aa22.42■■□□□ 1.18
RTTN-221ENST00000640736 DENND4BO75064 1496 aaPredicted RBP22.41■■□□□ 1.18
RTTN-221ENST00000640736 CLIP1P30622 1438 aa22.4■■□□□ 1.18
RTTN-221ENST00000640736 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms