RNA–Protein interactions for RNA: ENST00000640481.1

NECAP1-226, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,216 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-226ENST00000640481 AQRO60306 1485 aaKnown RBP eCLIP10.21□□□□□ -0.786e-7■■■■■ 30.6
NECAP1-226ENST00000640481 FHOD3Q2V2M9 1422 aa10.2□□□□□ -0.78
NECAP1-226ENST00000640481 FHAD1B1AJZ9 1412 aa10.19□□□□□ -0.78
NECAP1-226ENST00000640481 CTTNBP2Q8WZ74 1663 aa10.17□□□□□ -0.78
NECAP1-226ENST00000640481 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
NECAP1-226ENST00000640481 EFCAB5A4FU69 1503 aa10.16□□□□□ -0.78
NECAP1-226ENST00000640481 TIAM1Q13009 1591 aa10.16□□□□□ -0.78
NECAP1-226ENST00000640481 WDR62O43379 1518 aa10.15□□□□□ -0.78
NECAP1-226ENST00000640481 MAP3K1Q13233 1512 aa10.15□□□□□ -0.78
NECAP1-226ENST00000640481 ZNF608Q9ULD9 1512 aaPredicted RBP10.15□□□□□ -0.78
NECAP1-226ENST00000640481 IFT140Q96RY7 1462 aa10.15□□□□□ -0.79
NECAP1-226ENST00000640481 RRBP1Q9P2E9 1410 aaKnown RBP10.15□□□□□ -0.79
NECAP1-226ENST00000640481 PCF11O94913 1555 aaKnown RBP10.14□□□□□ -0.79
NECAP1-226ENST00000640481 GRIN2BQ13224 1484 aa10.13□□□□□ -0.79
NECAP1-226ENST00000640481 LRRC9Q6ZRR7 1453 aa10.13□□□□□ -0.79
NECAP1-226ENST00000640481 PBRM1Q86U86 1689 aa10.13□□□□□ -0.79
NECAP1-226ENST00000640481 CCNB3Q8WWL7 1395 aa10.13□□□□□ -0.79
NECAP1-226ENST00000640481 ITGAEP38570 1179 aa10.12□□□□□ -0.79
NECAP1-226ENST00000640481 FMN1Q68DA7 1419 aa10.12□□□□□ -0.79
NECAP1-226ENST00000640481 CASKIN1Q8WXD9 1431 aa10.12□□□□□ -0.79
NECAP1-226ENST00000640481 FYCO1Q9BQS8 1478 aa10.11□□□□□ -0.79
NECAP1-226ENST00000640481 ADAMTS12P58397 1594 aa10.1□□□□□ -0.79
NECAP1-226ENST00000640481 PHLDB1Q86UU1 1377 aa10.09□□□□□ -0.79
NECAP1-226ENST00000640481 SAMD9Q5K651 1589 aa10.09□□□□□ -0.79
NECAP1-226ENST00000640481 SNAPC4Q5SXM2 1469 aa10.07□□□□□ -0.8
NECAP1-226ENST00000640481 CFAP43Q8NDM7 1665 aa10.07□□□□□ -0.8
NECAP1-226ENST00000640481 THOC2Q8NI27 1593 aaKnown RBP10.07□□□□□ -0.8
NECAP1-226ENST00000640481 FAM50AQ14320 339 aaKnown RBP10.06□□□□□ -0.8
NECAP1-226ENST00000640481 SLC24A1O60721 1099 aa10.06□□□□□ -0.8
NECAP1-226ENST00000640481 IQGAP2Q13576 1575 aa10.06□□□□□ -0.8
NECAP1-226ENST00000640481 EIF4G3O43432 1585 aaKnown RBP10.05□□□□□ -0.8
NECAP1-226ENST00000640481 MTUS2Q5JR59 1369 aa10.04□□□□□ -0.8
NECAP1-226ENST00000640481 CHMP7Q8WUX9 453 aaPredicted RBP10.04□□□□□ -0.8
NECAP1-226ENST00000640481 FBLN2P98095 1184 aa10.03□□□□□ -0.8
NECAP1-226ENST00000640481 DHX57Q6P158 1386 aaKnown RBP10.03□□□□□ -0.8
NECAP1-226ENST00000640481 GRIN2AQ12879 1464 aa10.02□□□□□ -0.81
NECAP1-226ENST00000640481 KIAA0586Q9BVV6 1533 aa10.02□□□□□ -0.81
NECAP1-226ENST00000640481 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
NECAP1-226ENST00000640481 ARID3CA6NKF2 412 aa10□□□□□ -0.81
NECAP1-226ENST00000640481 MAGI1Q96QZ7 1491 aaPredicted RBP10□□□□□ -0.81
NECAP1-226ENST00000640481 UGGT2Q9NYU1 1516 aa10□□□□□ -0.81
NECAP1-226ENST00000640481 CLSPNQ9HAW4 1339 aa9.99□□□□□ -0.81
NECAP1-226ENST00000640481 RAB3GAP2Q9H2M9 1393 aa9.99□□□□□ -0.81
NECAP1-226ENST00000640481 SYNJ2O15056 1496 aa9.98□□□□□ -0.81
NECAP1-226ENST00000640481 FGD6Q6ZV73 1430 aa9.97□□□□□ -0.81
NECAP1-226ENST00000640481 SETD5Q9C0A6 1442 aa9.97□□□□□ -0.81
NECAP1-226ENST00000640481 DISP1Q96F81 1524 aa9.97□□□□□ -0.81
NECAP1-226ENST00000640481 NCOA2Q15596 1464 aa9.97□□□□□ -0.81
NECAP1-226ENST00000640481 ZNF316A6NFI3 1004 aaPredicted RBP9.97□□□□□ -0.81
NECAP1-226ENST00000640481 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.96□□□□□ -0.81
NECAP1-226ENST00000640481 CCDC18Q5T9S5 1454 aa9.96□□□□□ -0.82
NECAP1-226ENST00000640481 EPRSP07814 1512 aaKnown RBP9.96□□□□□ -0.82
NECAP1-226ENST00000640481 DIEXFQ68CQ4 756 aaKnown RBP9.95□□□□□ -0.82
NECAP1-226ENST00000640481 MAGI3Q5TCQ9 1506 aa9.95□□□□□ -0.82
NECAP1-226ENST00000640481 HECW1Q76N89 1606 aa9.95□□□□□ -0.82
NECAP1-226ENST00000640481 JPH4Q96JJ6 628 aa9.95□□□□□ -0.82
NECAP1-226ENST00000640481 CEP170Q5SW79 1584 aa9.94□□□□□ -0.82
NECAP1-226ENST00000640481 CDK13Q14004 1512 aaKnown RBP9.94□□□□□ -0.82
NECAP1-226ENST00000640481 EHBP1L1Q8N3D4 1523 aa9.94□□□□□ -0.82
NECAP1-226ENST00000640481 KIAA0556O60303 1618 aa9.94□□□□□ -0.82
NECAP1-226ENST00000640481 MYOM3Q5VTT5 1437 aa9.94□□□□□ -0.82
NECAP1-226ENST00000640481 SUPT6HQ7KZ85 1726 aaKnown RBP9.93□□□□□ -0.82
NECAP1-226ENST00000640481 NUP160Q12769 1436 aa9.92□□□□□ -0.82
NECAP1-226ENST00000640481 PTPRKQ15262 1439 aa9.91□□□□□ -0.82
NECAP1-226ENST00000640481 ARHGEF11O15085 1522 aa9.9□□□□□ -0.82
NECAP1-226ENST00000640481 NUP153P49790 1475 aaKnown RBP9.9□□□□□ -0.83
NECAP1-226ENST00000640481 CARMIL2Q6F5E8 1435 aa9.89□□□□□ -0.83
NECAP1-226ENST00000640481 CDK11AQ9UQ88 783 aaPredicted RBP9.88□□□□□ -0.83
NECAP1-226ENST00000640481 MAPKBP1O60336 1514 aa9.88□□□□□ -0.83
NECAP1-226ENST00000640481 RAPGEF6Q8TEU7 1601 aa9.88□□□□□ -0.83
NECAP1-226ENST00000640481 PLB1Q6P1J6 1458 aa9.88□□□□□ -0.83
NECAP1-226ENST00000640481 PTPN23Q9H3S7 1636 aa9.87□□□□□ -0.83
NECAP1-226ENST00000640481 CHIC2Q9UKJ5 165 aa9.87□□□□□ -0.83
NECAP1-226ENST00000640481 SIN3AQ96ST3 1273 aa9.87□□□□□ -0.83
NECAP1-226ENST00000640481 NEUROD1Q13562 356 aa9.86□□□□□ -0.83
NECAP1-226ENST00000640481 PELP1Q8IZL8 1130 aaKnown RBP9.86□□□□□ -0.83
NECAP1-226ENST00000640481 HFM1A2PYH4 1435 aa9.86□□□□□ -0.83
NECAP1-226ENST00000640481 RRP7BPQ9NSQ0 103 aa9.85□□□□□ -0.83
NECAP1-226ENST00000640481 NAIPQ13075 1403 aa9.84□□□□□ -0.83
NECAP1-226ENST00000640481 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
NECAP1-226ENST00000640481 TCOF1Q13428 1488 aaKnown RBP9.84□□□□□ -0.83
NECAP1-226ENST00000640481 PRG4Q92954 1404 aaPredicted RBP9.84□□□□□ -0.83
NECAP1-226ENST00000640481 ZNF644Q9H582 1327 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-226ENST00000640481 TROQ12816 1431 aaPredicted RBP9.82□□□□□ -0.84
NECAP1-226ENST00000640481 UACAQ9BZF9 1416 aa9.8□□□□□ -0.84
NECAP1-226ENST00000640481 PLEKHD1A6NEE1 506 aa9.8□□□□□ -0.84
NECAP1-226ENST00000640481 PTPRGP23470 1445 aa9.8□□□□□ -0.84
NECAP1-226ENST00000640481 CFDP1Q9UEE9 299 aaPredicted RBP9.79□□□□□ -0.84
NECAP1-226ENST00000640481 CHD1O14646 1710 aa9.79□□□□□ -0.84
NECAP1-226ENST00000640481 ZNF777Q9ULD5 760 aaPredicted RBP9.78□□□□□ -0.84
NECAP1-226ENST00000640481 ATP10BO94823 1461 aa9.78□□□□□ -0.84
NECAP1-226ENST00000640481 TRIM52Q96A61 297 aa9.78□□□□□ -0.84
NECAP1-226ENST00000640481 ABCA8O94911 1581 aa9.78□□□□□ -0.84
NECAP1-226ENST00000640481 MIER1Q8N108 512 aa9.78□□□□□ -0.84
NECAP1-226ENST00000640481 TIMELESSQ9UNS1 1208 aa9.77□□□□□ -0.84
NECAP1-226ENST00000640481 ABCC5O15440 1437 aa9.77□□□□□ -0.85
NECAP1-226ENST00000640481 DAPK1P53355 1430 aa9.77□□□□□ -0.85
NECAP1-226ENST00000640481 GPATCH8Q9UKJ3 1502 aaKnown RBP9.76□□□□□ -0.85
NECAP1-226ENST00000640481 KIF14Q15058 1648 aa9.76□□□□□ -0.85
NECAP1-226ENST00000640481 PPP1R15AO75807 674 aaPredicted RBP9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms