RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 THOC2Q8NI27 1593 aaKnown RBP8.51□□□□□ -1.05
RTTN-218ENST00000640408 TNIKQ9UKE5 1360 aa8.5□□□□□ -1.05
RTTN-218ENST00000640408 SNAPC4Q5SXM2 1469 aa8.5□□□□□ -1.05
RTTN-218ENST00000640408 ZNF608Q9ULD9 1512 aaPredicted RBP8.48□□□□□ -1.05
RTTN-218ENST00000640408 KIAA0586Q9BVV6 1533 aa8.47□□□□□ -1.05
RTTN-218ENST00000640408 CLIP1P30622 1438 aa8.46□□□□□ -1.06
RTTN-218ENST00000640408 CUL7Q14999 1698 aa8.46□□□□□ -1.06
RTTN-218ENST00000640408 PLEKHD1A6NEE1 506 aa8.45□□□□□ -1.06
RTTN-218ENST00000640408 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
RTTN-218ENST00000640408 PTPRGP23470 1445 aa8.45□□□□□ -1.06
RTTN-218ENST00000640408 PRXQ9BXM0 1461 aa8.44□□□□□ -1.06
RTTN-218ENST00000640408 FMN1Q68DA7 1419 aa8.44□□□□□ -1.06
RTTN-218ENST00000640408 P3H3Q8IVL6 736 aa8.44□□□□□ -1.06
RTTN-218ENST00000640408 LOC105371045A0A1W2PR82 267 aa8.43□□□□□ -1.06
RTTN-218ENST00000640408 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
RTTN-218ENST00000640408 EIF4G3O43432 1585 aaKnown RBP8.41□□□□□ -1.06
RTTN-218ENST00000640408 HRCP23327 699 aa8.4□□□□□ -1.06
RTTN-218ENST00000640408 CYB5RLQ6IPT4 315 aa8.4□□□□□ -1.06
RTTN-218ENST00000640408 PRG4Q92954 1404 aaPredicted RBP8.39□□□□□ -1.07
RTTN-218ENST00000640408 NUP160Q12769 1436 aa8.38□□□□□ -1.07
RTTN-218ENST00000640408 PCGF6Q9BYE7 350 aa8.38□□□□□ -1.07
RTTN-218ENST00000640408 KIF21BO75037 1637 aa8.37□□□□□ -1.07
RTTN-218ENST00000640408 RUSC2Q8N2Y8 1516 aa8.37□□□□□ -1.07
RTTN-218ENST00000640408 ABCA5Q8WWZ7 1642 aa8.37□□□□□ -1.07
RTTN-218ENST00000640408 DNAJC5Q9H3Z4 198 aa8.37□□□□□ -1.07
RTTN-218ENST00000640408 CEP162Q5TB80 1403 aa8.36□□□□□ -1.07
RTTN-218ENST00000640408 MTUS2Q5JR59 1369 aa8.36□□□□□ -1.07
RTTN-218ENST00000640408 MYT1LQ9UL68 1186 aa8.36□□□□□ -1.07
RTTN-218ENST00000640408 ADAMTS12P58397 1594 aa8.36□□□□□ -1.07
RTTN-218ENST00000640408 EFCAB5A4FU69 1503 aa8.35□□□□□ -1.07
RTTN-218ENST00000640408 IQGAP2Q13576 1575 aa8.34□□□□□ -1.07
RTTN-218ENST00000640408 TRHP20396 242 aaPredicted RBP8.34□□□□□ -1.07
RTTN-218ENST00000640408 ACIN1Q9UKV3 1341 aaKnown RBP8.33□□□□□ -1.08
RTTN-218ENST00000640408 YTHDC1Q96MU7 727 aaKnown RBP8.32□□□□□ -1.08
RTTN-218ENST00000640408 UACAQ9BZF9 1416 aa8.3□□□□□ -1.08
RTTN-218ENST00000640408 KCNH8Q96L42 1107 aa8.3□□□□□ -1.08
RTTN-218ENST00000640408 VPS8Q8N3P4 1428 aa8.3□□□□□ -1.08
RTTN-218ENST00000640408 EFCAB2Q5VUJ9 269 aa8.29□□□□□ -1.08
RTTN-218ENST00000640408 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
RTTN-218ENST00000640408 TSPY4P0CV99 314 aa8.28□□□□□ -1.08
RTTN-218ENST00000640408 TSPY10P0CW01 314 aa8.28□□□□□ -1.08
RTTN-218ENST00000640408 PBRM1Q86U86 1689 aa8.28□□□□□ -1.08
RTTN-218ENST00000640408 UGGT2Q9NYU1 1516 aa8.28□□□□□ -1.08
RTTN-218ENST00000640408 FHOD3Q2V2M9 1422 aa8.28□□□□□ -1.08
RTTN-218ENST00000640408 RSPH4AQ5TD94 716 aa8.27□□□□□ -1.08
RTTN-218ENST00000640408 CCDC18Q5T9S5 1454 aa8.26□□□□□ -1.09
RTTN-218ENST00000640408 CFDP1Q9UEE9 299 aaPredicted RBP8.25□□□□□ -1.09
RTTN-218ENST00000640408 CCNB3Q8WWL7 1395 aa8.25□□□□□ -1.09
RTTN-218ENST00000640408 PLB1Q6P1J6 1458 aa8.24□□□□□ -1.09
RTTN-218ENST00000640408 ESF1Q9H501 851 aaKnown RBP8.24□□□□□ -1.09
RTTN-218ENST00000640408 CASKIN1Q8WXD9 1431 aa8.24□□□□□ -1.09
RTTN-218ENST00000640408 FAM69CQ0P6D2 419 aa8.23□□□□□ -1.09
RTTN-218ENST00000640408 ZNF777Q9ULD5 760 aaPredicted RBP8.23□□□□□ -1.09
RTTN-218ENST00000640408 NEFLP07196 543 aa8.22□□□□□ -1.09
RTTN-218ENST00000640408 FAM50AQ14320 339 aaKnown RBP8.22□□□□□ -1.09
RTTN-218ENST00000640408 PHLDB1Q86UU1 1377 aa8.21□□□□□ -1.09
RTTN-218ENST00000640408 CEP170Q5SW79 1584 aa8.21□□□□□ -1.1
RTTN-218ENST00000640408 FYCO1Q9BQS8 1478 aa8.2□□□□□ -1.1
RTTN-218ENST00000640408 ARHGEF11O15085 1522 aa8.2□□□□□ -1.1
RTTN-218ENST00000640408 ARHGAP35Q9NRY4 1499 aa8.2□□□□□ -1.1
RTTN-218ENST00000640408 TROQ12816 1431 aaPredicted RBP8.18□□□□□ -1.1
RTTN-218ENST00000640408 UHRF1BP1LA0JNW5 1464 aa8.18□□□□□ -1.1
RTTN-218ENST00000640408 CHD1O14646 1710 aa8.18□□□□□ -1.1
RTTN-218ENST00000640408 CLASP1Q7Z460 1538 aa8.17□□□□□ -1.1
RTTN-218ENST00000640408 ABCC2Q92887 1545 aa8.17□□□□□ -1.1
RTTN-218ENST00000640408 HECW1Q76N89 1606 aa8.17□□□□□ -1.1
RTTN-218ENST00000640408 TRIM26Q12899 539 aaPredicted RBP8.16□□□□□ -1.1
RTTN-218ENST00000640408 KIAA0556O60303 1618 aa8.16□□□□□ -1.1
RTTN-218ENST00000640408 PLEKHH2Q8IVE3 1493 aa8.15□□□□□ -1.1
RTTN-218ENST00000640408 CTTNBP2Q8WZ74 1663 aa8.15□□□□□ -1.1
RTTN-218ENST00000640408 DISP1Q96F81 1524 aa8.15□□□□□ -1.11
RTTN-218ENST00000640408 TEX14Q8IWB6 1497 aa8.14□□□□□ -1.11
RTTN-218ENST00000640408 ITGAEP38570 1179 aa8.14□□□□□ -1.11
RTTN-218ENST00000640408 ARAP1Q96P48 1450 aa8.14□□□□□ -1.11
RTTN-218ENST00000640408 MAP3K1Q13233 1512 aa8.13□□□□□ -1.11
RTTN-218ENST00000640408 EPRSP07814 1512 aaKnown RBP8.13□□□□□ -1.11
RTTN-218ENST00000640408 CD109Q6YHK3 1445 aa8.12□□□□□ -1.11
RTTN-218ENST00000640408 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
RTTN-218ENST00000640408 SPAG9O60271 1321 aaKnown RBP8.11□□□□□ -1.11
RTTN-218ENST00000640408 WDR7Q9Y4E6 1490 aa8.1□□□□□ -1.11
RTTN-218ENST00000640408 KDM5BQ9UGL1 1544 aa8.1□□□□□ -1.11
RTTN-218ENST00000640408 ATP10BO94823 1461 aa8.1□□□□□ -1.11
RTTN-218ENST00000640408 ARID4BQ4LE39 1312 aaPredicted RBP8.1□□□□□ -1.11
RTTN-218ENST00000640408 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
RTTN-218ENST00000640408 RTL5Q5HYW3 569 aaPredicted RBP8.09□□□□□ -1.11
RTTN-218ENST00000640408 MIA2Q96PC5 1412 aa8.09□□□□□ -1.11
RTTN-218ENST00000640408 EHBP1L1Q8N3D4 1523 aa8.09□□□□□ -1.11
RTTN-218ENST00000640408 SAMD9Q5K651 1589 aa8.09□□□□□ -1.11
RTTN-218ENST00000640408 RAPGEF6Q8TEU7 1601 aa8.09□□□□□ -1.11
RTTN-218ENST00000640408 MYOM3Q5VTT5 1437 aa8.08□□□□□ -1.12
RTTN-218ENST00000640408 SHROOM2Q13796 1616 aa8.08□□□□□ -1.12
RTTN-218ENST00000640408 ANKRD30AQ9BXX3 1397 aa8.08□□□□□ -1.12
RTTN-218ENST00000640408 TRIM52Q96A61 297 aa8.08□□□□□ -1.12
RTTN-218ENST00000640408 KANK1Q14678 1352 aa8.07□□□□□ -1.12
RTTN-218ENST00000640408 GLIPR1L2Q4G1C9 344 aa8.07□□□□□ -1.12
RTTN-218ENST00000640408 NUP153P49790 1475 aaKnown RBP8.07□□□□□ -1.12
RTTN-218ENST00000640408 LRRC9Q6ZRR7 1453 aa8.07□□□□□ -1.12
RTTN-218ENST00000640408 GTF3C3Q9Y5Q9 886 aa8.06□□□□□ -1.12
RTTN-218ENST00000640408 POGZQ7Z3K3 1410 aa8.06□□□□□ -1.12
RTTN-218ENST00000640408 ABCA8O94911 1581 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms