RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.14
SCARB2-218ENST00000639715 ARHGEF11O15085 1522 aa7.96□□□□□ -1.14
SCARB2-218ENST00000639715 WRNQ14191 1432 aaPredicted RBP eCLIP7.95□□□□□ -1.14
SCARB2-218ENST00000639715 ERICH6BQ5W0A0 696 aa7.94□□□□□ -1.14
SCARB2-218ENST00000639715 CLIP1P30622 1438 aa7.94□□□□□ -1.14
SCARB2-218ENST00000639715 PRDM2Q13029 1718 aa7.94□□□□□ -1.14
SCARB2-218ENST00000639715 CEP164Q9UPV0 1460 aa7.92□□□□□ -1.14
SCARB2-218ENST00000639715 PDS5BQ9NTI5 1447 aa7.92□□□□□ -1.14
SCARB2-218ENST00000639715 FAM50AQ14320 339 aaKnown RBP7.92□□□□□ -1.14
SCARB2-218ENST00000639715 DAXXQ9UER7 740 aaPredicted RBP7.91□□□□□ -1.14
SCARB2-218ENST00000639715 CCDC88BA6NC98 1476 aa7.89□□□□□ -1.15
SCARB2-218ENST00000639715 BAZ1BQ9UIG0 1483 aaKnown RBP7.89□□□□□ -1.15
SCARB2-218ENST00000639715 TOP2AP11388 1531 aaKnown RBP7.89□□□□□ -1.15
SCARB2-218ENST00000639715 WIZO95785 1651 aa7.88□□□□□ -1.15
SCARB2-218ENST00000639715 ATAD2BQ9ULI0 1458 aa7.88□□□□□ -1.15
SCARB2-218ENST00000639715 PLEKHG5O94827 1062 aa7.87□□□□□ -1.15
SCARB2-218ENST00000639715 SOGA1O94964 1423 aa7.85□□□□□ -1.15
SCARB2-218ENST00000639715 NESP48681 1621 aa7.83□□□□□ -1.16
SCARB2-218ENST00000639715 ABCC8Q09428 1581 aa7.82□□□□□ -1.16
SCARB2-218ENST00000639715 KIF27Q86VH2 1401 aa7.82□□□□□ -1.16
SCARB2-218ENST00000639715 SMARCA4P51532 1647 aa7.82□□□□□ -1.16
SCARB2-218ENST00000639715 ANP32CO43423 234 aa7.82□□□□□ -1.16
SCARB2-218ENST00000639715 CLASP1Q7Z460 1538 aa7.81□□□□□ -1.16
SCARB2-218ENST00000639715 VSIG10Q8N0Z9 540 aa7.81□□□□□ -1.16
SCARB2-218ENST00000639715 ARAP1Q96P48 1450 aa7.81□□□□□ -1.16
SCARB2-218ENST00000639715 OSCARQ8IYS5 282 aa7.8□□□□□ -1.16
SCARB2-218ENST00000639715 VPS8Q8N3P4 1428 aa7.79□□□□□ -1.16
SCARB2-218ENST00000639715 P3H3Q8IVL6 736 aa7.79□□□□□ -1.16
SCARB2-218ENST00000639715 TRIM52Q96A61 297 aa7.79□□□□□ -1.16
SCARB2-218ENST00000639715 ANP32AP39687 249 aaKnown RBP7.78□□□□□ -1.16
SCARB2-218ENST00000639715 IL27Q8NEV9 243 aa7.78□□□□□ -1.16
SCARB2-218ENST00000639715 A0A0U1RQG5 324 aaPredicted RBP7.77□□□□□ -1.17
SCARB2-218ENST00000639715 AEBP2Q6ZN18 517 aaPredicted RBP7.76□□□□□ -1.17
SCARB2-218ENST00000639715 ZBTB47Q9UFB7 747 aaPredicted RBP7.76□□□□□ -1.17
SCARB2-218ENST00000639715 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
SCARB2-218ENST00000639715 NOP58Q9Y2X3 529 aaKnown RBP7.76□□□□□ -1.17
SCARB2-218ENST00000639715 TONSLQ96HA7 1378 aa7.74□□□□□ -1.17
SCARB2-218ENST00000639715 MSH5O43196 834 aa7.73□□□□□ -1.17
SCARB2-218ENST00000639715 KIF13AQ9H1H9 1805 aa7.73□□□□□ -1.17
SCARB2-218ENST00000639715 NEFMP07197 916 aa7.72□□□□□ -1.17
SCARB2-218ENST00000639715 CHD1O14646 1710 aa7.72□□□□□ -1.17
SCARB2-218ENST00000639715 FANCIQ9NVI1 1328 aa7.72□□□□□ -1.17
SCARB2-218ENST00000639715 POLR3GLQ9BT43 218 aa7.71□□□□□ -1.17
SCARB2-218ENST00000639715 MTUS2Q5JR59 1369 aa7.7□□□□□ -1.18
SCARB2-218ENST00000639715 CCNB3Q8WWL7 1395 aa7.7□□□□□ -1.18
SCARB2-218ENST00000639715 IFT140Q96RY7 1462 aa7.7□□□□□ -1.18
SCARB2-218ENST00000639715 FHAD1B1AJZ9 1412 aa7.7□□□□□ -1.18
SCARB2-218ENST00000639715 ILDR1Q86SU0 546 aaPredicted RBP7.7□□□□□ -1.18
SCARB2-218ENST00000639715 DDX10Q13206 875 aaKnown RBP7.7□□□□□ -1.18
SCARB2-218ENST00000639715 IRX6P78412 446 aaPredicted RBP7.69□□□□□ -1.18
SCARB2-218ENST00000639715 NPM2Q86SE8 214 aaKnown RBP7.68□□□□□ -1.18
SCARB2-218ENST00000639715 CARMIL1Q5VZK9 1371 aa7.68□□□□□ -1.18
SCARB2-218ENST00000639715 RSPH6AQ9H0K4 717 aa7.68□□□□□ -1.18
SCARB2-218ENST00000639715 RUSC2Q8N2Y8 1516 aa7.68□□□□□ -1.18
SCARB2-218ENST00000639715 ZMYND15Q9H091 742 aa7.66□□□□□ -1.18
SCARB2-218ENST00000639715 RAPGEF2Q9Y4G8 1499 aa7.66□□□□□ -1.18
SCARB2-218ENST00000639715 CADPSQ9ULU8 1353 aa7.65□□□□□ -1.18
SCARB2-218ENST00000639715 PDE4CQ08493 712 aa7.64□□□□□ -1.19
SCARB2-218ENST00000639715 NAP1L5Q96NT1 182 aaPredicted RBP7.64□□□□□ -1.19
SCARB2-218ENST00000639715 KANK4Q5T7N3 995 aaPredicted RBP7.64□□□□□ -1.19
SCARB2-218ENST00000639715 LAS1LQ9Y4W2 734 aaKnown RBP7.64□□□□□ -1.19
SCARB2-218ENST00000639715 HSP90AA2PQ14568 343 aaPredicted RBP7.63□□□□□ -1.19
SCARB2-218ENST00000639715 EIF4G3O43432 1585 aaKnown RBP7.62□□□□□ -1.19
SCARB2-218ENST00000639715 KIF21BO75037 1637 aa7.62□□□□□ -1.19
SCARB2-218ENST00000639715 SETD5Q9C0A6 1442 aa7.62□□□□□ -1.19
SCARB2-218ENST00000639715 KDM6BO15054 1643 aa7.61□□□□□ -1.19
SCARB2-218ENST00000639715 CNGB1Q14028 1251 aaPredicted RBP7.61□□□□□ -1.19
SCARB2-218ENST00000639715 SHROOM2Q13796 1616 aa7.61□□□□□ -1.19
SCARB2-218ENST00000639715 SYNJ1O43426 1573 aa7.61□□□□□ -1.19
SCARB2-218ENST00000639715 ZNF326Q5BKZ1 582 aaKnown RBP7.6□□□□□ -1.19
SCARB2-218ENST00000639715 FBLN2P98095 1184 aa7.6□□□□□ -1.19
SCARB2-218ENST00000639715 HNRNPUQ00839 825 aaKnown RBP eCLIP7.6□□□□□ -1.19
SCARB2-218ENST00000639715 TARBP1Q13395 1621 aaKnown RBP7.6□□□□□ -1.19
SCARB2-218ENST00000639715 HSP90AA1P07900 732 aaKnown RBP7.6□□□□□ -1.19
SCARB2-218ENST00000639715 EIF4G2P78344 907 aaKnown RBP eCLIP7.59□□□□□ -1.19
SCARB2-218ENST00000639715 CHIC2Q9UKJ5 165 aa7.59□□□□□ -1.19
SCARB2-218ENST00000639715 ARID3CA6NKF2 412 aa7.59□□□□□ -1.19
SCARB2-218ENST00000639715 MAPKBP1O60336 1514 aa7.59□□□□□ -1.19
SCARB2-218ENST00000639715 CFTRP13569 1480 aa7.59□□□□□ -1.2
SCARB2-218ENST00000639715 PPM1GO15355 546 aaPredicted RBP7.58□□□□□ -1.2
SCARB2-218ENST00000639715 ARHGAP35Q9NRY4 1499 aa7.58□□□□□ -1.2
SCARB2-218ENST00000639715 DHX57Q6P158 1386 aaKnown RBP7.58□□□□□ -1.2
SCARB2-218ENST00000639715 ZNF777Q9ULD5 760 aaPredicted RBP7.58□□□□□ -1.2
SCARB2-218ENST00000639715 RAB3GAP2Q9H2M9 1393 aa7.57□□□□□ -1.2
SCARB2-218ENST00000639715 SIN3AQ96ST3 1273 aa7.57□□□□□ -1.2
SCARB2-218ENST00000639715 BRPF3Q9ULD4 1205 aa7.57□□□□□ -1.2
SCARB2-218ENST00000639715 FMN1Q68DA7 1419 aa7.57□□□□□ -1.2
SCARB2-218ENST00000639715 ERICH3Q5RHP9 1530 aa7.57□□□□□ -1.2
SCARB2-218ENST00000639715 URB2Q14146 1524 aaKnown RBP7.57□□□□□ -1.2
SCARB2-218ENST00000639715 RRP7BPQ9NSQ0 103 aa7.56□□□□□ -1.2
SCARB2-218ENST00000639715 CCER2I3L3R5 266 aa7.56□□□□□ -1.2
SCARB2-218ENST00000639715 FBXO41Q8TF61 875 aa7.55□□□□□ -1.2
SCARB2-218ENST00000639715 HECW2Q9P2P5 1572 aa7.55□□□□□ -1.2
SCARB2-218ENST00000639715 PAK3O75914 559 aaPredicted RBP7.55□□□□□ -1.2
SCARB2-218ENST00000639715 PPP4R2Q9NY27 417 aa7.55□□□□□ -1.2
SCARB2-218ENST00000639715 IPO9Q96P70 1041 aaKnown RBP7.55□□□□□ -1.2
SCARB2-218ENST00000639715 ARID4BQ4LE39 1312 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-218ENST00000639715 B4GALNT3Q6L9W6 998 aa7.54□□□□□ -1.2
SCARB2-218ENST00000639715 HIRIP3Q9BW71 556 aaPredicted RBP7.54□□□□□ -1.2
SCARB2-218ENST00000639715 TSPY4P0CV99 314 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms