RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 EFCAB5A4FU69 1503 aa12.86□□□□□ -0.35
NECAP1-218ENST00000639595 GAPVD1Q14C86 1478 aa12.86□□□□□ -0.35
NECAP1-218ENST00000639595 CCNB3Q8WWL7 1395 aa12.86□□□□□ -0.35
NECAP1-218ENST00000639595 CLSPNQ9HAW4 1339 aa12.85□□□□□ -0.35
NECAP1-218ENST00000639595 AQRO60306 1485 aaKnown RBP eCLIP12.83□□□□□ -0.366e-7■■■■■ 30.6
NECAP1-218ENST00000639595 LRRC9Q6ZRR7 1453 aa12.83□□□□□ -0.36
NECAP1-218ENST00000639595 KIF21AQ7Z4S6 1674 aa12.82□□□□□ -0.36
NECAP1-218ENST00000639595 TARBP1Q13395 1621 aaKnown RBP12.81□□□□□ -0.36
NECAP1-218ENST00000639595 CASKIN1Q8WXD9 1431 aa12.81□□□□□ -0.36
NECAP1-218ENST00000639595 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
NECAP1-218ENST00000639595 FYCO1Q9BQS8 1478 aa12.8□□□□□ -0.36
NECAP1-218ENST00000639595 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
NECAP1-218ENST00000639595 DHX57Q6P158 1386 aaKnown RBP12.79□□□□□ -0.36
NECAP1-218ENST00000639595 FMN1Q68DA7 1419 aa12.78□□□□□ -0.36
NECAP1-218ENST00000639595 CTTNBP2Q8WZ74 1663 aa12.78□□□□□ -0.36
NECAP1-218ENST00000639595 MRC2Q9UBG0 1479 aa12.78□□□□□ -0.36
NECAP1-218ENST00000639595 PCF11O94913 1555 aaKnown RBP12.77□□□□□ -0.36
NECAP1-218ENST00000639595 ZNF316A6NFI3 1004 aaPredicted RBP12.77□□□□□ -0.37
NECAP1-218ENST00000639595 DIEXFQ68CQ4 756 aaKnown RBP12.76□□□□□ -0.37
NECAP1-218ENST00000639595 PHLDB1Q86UU1 1377 aa12.76□□□□□ -0.37
NECAP1-218ENST00000639595 CFAP43Q8NDM7 1665 aa12.75□□□□□ -0.37
NECAP1-218ENST00000639595 SAMD9Q5K651 1589 aa12.74□□□□□ -0.37
NECAP1-218ENST00000639595 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
NECAP1-218ENST00000639595 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.73□□□□□ -0.37
NECAP1-218ENST00000639595 GRIN2BQ13224 1484 aa12.69□□□□□ -0.38
NECAP1-218ENST00000639595 IFT140Q96RY7 1462 aa12.69□□□□□ -0.38
NECAP1-218ENST00000639595 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
NECAP1-218ENST00000639595 WDR62O43379 1518 aa12.68□□□□□ -0.38
NECAP1-218ENST00000639595 RAB3GAP2Q9H2M9 1393 aa12.67□□□□□ -0.38
NECAP1-218ENST00000639595 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
NECAP1-218ENST00000639595 THOC2Q8NI27 1593 aaKnown RBP12.66□□□□□ -0.38
NECAP1-218ENST00000639595 ITGAEP38570 1179 aa12.66□□□□□ -0.38
NECAP1-218ENST00000639595 ADAMTS12P58397 1594 aa12.66□□□□□ -0.38
NECAP1-218ENST00000639595 PBRM1Q86U86 1689 aa12.65□□□□□ -0.38
NECAP1-218ENST00000639595 FAM50AQ14320 339 aaKnown RBP12.64□□□□□ -0.39
NECAP1-218ENST00000639595 MTUS2Q5JR59 1369 aa12.63□□□□□ -0.39
NECAP1-218ENST00000639595 ZNF608Q9ULD9 1512 aaPredicted RBP12.63□□□□□ -0.39
NECAP1-218ENST00000639595 FGD6Q6ZV73 1430 aa12.62□□□□□ -0.39
NECAP1-218ENST00000639595 IQGAP2Q13576 1575 aa12.62□□□□□ -0.39
NECAP1-218ENST00000639595 UGGT2Q9NYU1 1516 aa12.6□□□□□ -0.39
NECAP1-218ENST00000639595 CCDC18Q5T9S5 1454 aa12.59□□□□□ -0.39
NECAP1-218ENST00000639595 MAPKBP1O60336 1514 aa12.58□□□□□ -0.39
NECAP1-218ENST00000639595 KIAA0586Q9BVV6 1533 aa12.58□□□□□ -0.39
NECAP1-218ENST00000639595 NCOA2Q15596 1464 aa12.58□□□□□ -0.4
NECAP1-218ENST00000639595 MYOM3Q5VTT5 1437 aa12.57□□□□□ -0.4
NECAP1-218ENST00000639595 ARHGEF11O15085 1522 aa12.57□□□□□ -0.4
NECAP1-218ENST00000639595 EHBP1L1Q8N3D4 1523 aa12.57□□□□□ -0.4
NECAP1-218ENST00000639595 SCAF1Q9H7N4 1312 aaKnown RBP12.57□□□□□ -0.4
NECAP1-218ENST00000639595 LRRIQ1Q96JM4 1722 aa12.57□□□□□ -0.4
NECAP1-218ENST00000639595 ERCC6Q03468 1493 aa12.55□□□□□ -0.4
NECAP1-218ENST00000639595 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
NECAP1-218ENST00000639595 EPRSP07814 1512 aaKnown RBP12.54□□□□□ -0.4
NECAP1-218ENST00000639595 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
NECAP1-218ENST00000639595 HECW1Q76N89 1606 aa12.54□□□□□ -0.4
NECAP1-218ENST00000639595 MAGI1Q96QZ7 1491 aaPredicted RBP12.53□□□□□ -0.4
NECAP1-218ENST00000639595 SUPT6HQ7KZ85 1726 aaKnown RBP12.53□□□□□ -0.4
NECAP1-218ENST00000639595 MAGI3Q5TCQ9 1506 aa12.53□□□□□ -0.4
NECAP1-218ENST00000639595 HFM1A2PYH4 1435 aa12.53□□□□□ -0.4
NECAP1-218ENST00000639595 PTPRKQ15262 1439 aa12.53□□□□□ -0.4
NECAP1-218ENST00000639595 DISP1Q96F81 1524 aa12.52□□□□□ -0.4
NECAP1-218ENST00000639595 EIF4G3O43432 1585 aaKnown RBP12.52□□□□□ -0.4
NECAP1-218ENST00000639595 ACIN1Q9UKV3 1341 aaKnown RBP12.52□□□□□ -0.41
NECAP1-218ENST00000639595 MIER1Q8N108 512 aa12.51□□□□□ -0.41
NECAP1-218ENST00000639595 TCOF1Q13428 1488 aaKnown RBP12.5□□□□□ -0.41
NECAP1-218ENST00000639595 CENPBP07199 599 aaPredicted RBP12.49□□□□□ -0.41
NECAP1-218ENST00000639595 SYNJ2O15056 1496 aa12.49□□□□□ -0.41
NECAP1-218ENST00000639595 MIA2Q96PC5 1412 aa12.48□□□□□ -0.41
NECAP1-218ENST00000639595 KIAA0556O60303 1618 aa12.48□□□□□ -0.41
NECAP1-218ENST00000639595 NAIPQ13075 1403 aa12.48□□□□□ -0.41
NECAP1-218ENST00000639595 NEUROD1Q13562 356 aa12.48□□□□□ -0.41
NECAP1-218ENST00000639595 CHMP7Q8WUX9 453 aaPredicted RBP12.47□□□□□ -0.41
NECAP1-218ENST00000639595 PTPN23Q9H3S7 1636 aa12.47□□□□□ -0.41
NECAP1-218ENST00000639595 UACAQ9BZF9 1416 aa12.46□□□□□ -0.41
NECAP1-218ENST00000639595 SIN3AQ96ST3 1273 aa12.46□□□□□ -0.42
NECAP1-218ENST00000639595 CDK13Q14004 1512 aaKnown RBP12.46□□□□□ -0.42
NECAP1-218ENST00000639595 NUP160Q12769 1436 aa12.45□□□□□ -0.42
NECAP1-218ENST00000639595 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
NECAP1-218ENST00000639595 NUP153P49790 1475 aaKnown RBP12.44□□□□□ -0.42
NECAP1-218ENST00000639595 CEP170Q5SW79 1584 aa12.43□□□□□ -0.42
NECAP1-218ENST00000639595 CDK11AQ9UQ88 783 aaPredicted RBP12.42□□□□□ -0.42
NECAP1-218ENST00000639595 PPP1R15AO75807 674 aaPredicted RBP12.41□□□□□ -0.42
NECAP1-218ENST00000639595 JPH4Q96JJ6 628 aa12.41□□□□□ -0.42
NECAP1-218ENST00000639595 RAPGEF6Q8TEU7 1601 aa12.4□□□□□ -0.42
NECAP1-218ENST00000639595 CARMIL2Q6F5E8 1435 aa12.39□□□□□ -0.43
NECAP1-218ENST00000639595 ROCK1Q13464 1354 aa12.37□□□□□ -0.43
NECAP1-218ENST00000639595 ARID3CA6NKF2 412 aa12.37□□□□□ -0.43
NECAP1-218ENST00000639595 FBLN2P98095 1184 aa12.37□□□□□ -0.43
NECAP1-218ENST00000639595 TROQ12816 1431 aaPredicted RBP12.36□□□□□ -0.43
NECAP1-218ENST00000639595 RRP7BPQ9NSQ0 103 aa12.36□□□□□ -0.43
NECAP1-218ENST00000639595 PLB1Q6P1J6 1458 aa12.35□□□□□ -0.43
NECAP1-218ENST00000639595 CHIC2Q9UKJ5 165 aa12.35□□□□□ -0.43
NECAP1-218ENST00000639595 GCC2Q8IWJ2 1684 aa12.34□□□□□ -0.43
NECAP1-218ENST00000639595 ABCC5O15440 1437 aa12.33□□□□□ -0.44
NECAP1-218ENST00000639595 DAPK1P53355 1430 aa12.33□□□□□ -0.44
NECAP1-218ENST00000639595 PRG4Q92954 1404 aaPredicted RBP12.33□□□□□ -0.44
NECAP1-218ENST00000639595 TONSLQ96HA7 1378 aa12.33□□□□□ -0.44
NECAP1-218ENST00000639595 DENND4BO75064 1496 aaPredicted RBP12.32□□□□□ -0.44
NECAP1-218ENST00000639595 YTHDC1Q96MU7 727 aaKnown RBP12.31□□□□□ -0.44
NECAP1-218ENST00000639595 ZNF644Q9H582 1327 aaPredicted RBP12.31□□□□□ -0.44
NECAP1-218ENST00000639595 MYT1Q01538 1121 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms