RNA–Protein interactions for RNA: ENST00000639589.1

PRICKLE1-213, Transcript of prickle planar cell polarity protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRICKLE1, Length 5,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1-213ENST00000639589 CFDP1Q9UEE9 299 aaPredicted RBP12.91□□□□□ -0.34
PRICKLE1-213ENST00000639589 CHIC2Q9UKJ5 165 aa12.9□□□□□ -0.34
PRICKLE1-213ENST00000639589 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
PRICKLE1-213ENST00000639589 CLIP1P30622 1438 aa12.9□□□□□ -0.34
PRICKLE1-213ENST00000639589 RTL5Q5HYW3 569 aaPredicted RBP12.89□□□□□ -0.35
PRICKLE1-213ENST00000639589 CARMIL1Q5VZK9 1371 aa12.89□□□□□ -0.35
PRICKLE1-213ENST00000639589 MROH2BQ7Z745 1585 aa12.88□□□□□ -0.35
PRICKLE1-213ENST00000639589 CYB5RLQ6IPT4 315 aa12.88□□□□□ -0.35
PRICKLE1-213ENST00000639589 TDRD9Q8NDG6 1382 aaKnown RBP12.88□□□□□ -0.35
PRICKLE1-213ENST00000639589 MLECQ14165 292 aa12.88□□□□□ -0.35
PRICKLE1-213ENST00000639589 GOLGA3Q08378 1498 aa12.87□□□□□ -0.35
PRICKLE1-213ENST00000639589 FANCD2Q9BXW9 1451 aa12.87□□□□□ -0.35
PRICKLE1-213ENST00000639589 HDGFP51858 240 aaKnown RBP12.86□□□□□ -0.35
PRICKLE1-213ENST00000639589 TOP2AP11388 1531 aaKnown RBP12.85□□□□□ -0.35
PRICKLE1-213ENST00000639589 ACIN1Q9UKV3 1341 aaKnown RBP12.85□□□□□ -0.35
PRICKLE1-213ENST00000639589 CCDC88BA6NC98 1476 aa12.84□□□□□ -0.35
PRICKLE1-213ENST00000639589 BCL11AQ9H165 835 aa12.84□□□□□ -0.35
PRICKLE1-213ENST00000639589 SMARCA4P51532 1647 aa12.83□□□□□ -0.36
PRICKLE1-213ENST00000639589 A0A0G2JS52 829 aa12.82□□□□□ -0.36
PRICKLE1-213ENST00000639589 KANK1Q14678 1352 aa12.81□□□□□ -0.36
PRICKLE1-213ENST00000639589 CCNB3Q8WWL7 1395 aa12.79□□□□□ -0.36
PRICKLE1-213ENST00000639589 ZBTB7CA1YPR0 619 aa12.77□□□□□ -0.37
PRICKLE1-213ENST00000639589 CC2D2AQ9P2K1 1620 aa12.77□□□□□ -0.37
PRICKLE1-213ENST00000639589 FHAD1B1AJZ9 1412 aa12.75□□□□□ -0.37
PRICKLE1-213ENST00000639589 NCAPD3P42695 1498 aa12.74□□□□□ -0.37
PRICKLE1-213ENST00000639589 EFCAB2Q5VUJ9 269 aa12.73□□□□□ -0.37
PRICKLE1-213ENST00000639589 NPM2Q86SE8 214 aaKnown RBP12.73□□□□□ -0.37
PRICKLE1-213ENST00000639589 SENP3Q9H4L4 574 aaPredicted RBP12.72□□□□□ -0.37
PRICKLE1-213ENST00000639589 JPH4Q96JJ6 628 aa12.72□□□□□ -0.37
PRICKLE1-213ENST00000639589 PLEKHG5O94827 1062 aa12.71□□□□□ -0.37
PRICKLE1-213ENST00000639589 KDM2AQ9Y2K7 1162 aa12.71□□□□□ -0.38
PRICKLE1-213ENST00000639589 MRC2Q9UBG0 1479 aa12.7□□□□□ -0.38
PRICKLE1-213ENST00000639589 WIZO95785 1651 aa12.69□□□□□ -0.38
PRICKLE1-213ENST00000639589 RRP7BPQ9NSQ0 103 aa12.69□□□□□ -0.38
PRICKLE1-213ENST00000639589 WDR43Q15061 677 aaKnown RBP eCLIP12.67□□□□□ -0.38
PRICKLE1-213ENST00000639589 GGT6Q6P531 493 aa12.66□□□□□ -0.38
PRICKLE1-213ENST00000639589 FAM69CQ0P6D2 419 aa12.66□□□□□ -0.38
PRICKLE1-213ENST00000639589 PTPRGP23470 1445 aa12.66□□□□□ -0.38
PRICKLE1-213ENST00000639589 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
PRICKLE1-213ENST00000639589 POGKQ9P215 609 aa12.64□□□□□ -0.39
PRICKLE1-213ENST00000639589 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
PRICKLE1-213ENST00000639589 FAM9BQ8IZU0 186 aa12.61□□□□□ -0.39
PRICKLE1-213ENST00000639589 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
PRICKLE1-213ENST00000639589 GTF3C3Q9Y5Q9 886 aa12.61□□□□□ -0.39
PRICKLE1-213ENST00000639589 FMN1Q68DA7 1419 aa12.61□□□□□ -0.39
PRICKLE1-213ENST00000639589 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.6□□□□□ -0.39
PRICKLE1-213ENST00000639589 CEP162Q5TB80 1403 aa12.6□□□□□ -0.39
PRICKLE1-213ENST00000639589 IFT140Q96RY7 1462 aa12.6□□□□□ -0.39
PRICKLE1-213ENST00000639589 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
PRICKLE1-213ENST00000639589 RAPGEF2Q9Y4G8 1499 aa12.6□□□□□ -0.39
PRICKLE1-213ENST00000639589 TNIKQ9UKE5 1360 aa12.59□□□□□ -0.39
PRICKLE1-213ENST00000639589 ANP32AP39687 249 aaKnown RBP12.59□□□□□ -0.39
PRICKLE1-213ENST00000639589 DDX10Q13206 875 aaKnown RBP12.58□□□□□ -0.4
PRICKLE1-213ENST00000639589 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
PRICKLE1-213ENST00000639589 RGL3Q3MIN7 710 aa12.57□□□□□ -0.4
PRICKLE1-213ENST00000639589 HNRNPUQ00839 825 aaKnown RBP eCLIP12.57□□□□□ -0.4
PRICKLE1-213ENST00000639589 UPF2Q9HAU5 1272 aaKnown RBP12.55□□□□□ -0.4
PRICKLE1-213ENST00000639589 SALL2Q9Y467 1007 aaPredicted RBP12.55□□□□□ -0.4
PRICKLE1-213ENST00000639589 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
PRICKLE1-213ENST00000639589 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
PRICKLE1-213ENST00000639589 CDCA8Q53HL2 280 aa12.54□□□□□ -0.4
PRICKLE1-213ENST00000639589 GRIN2BQ13224 1484 aa12.53□□□□□ -0.4
PRICKLE1-213ENST00000639589 FGD5Q6ZNL6 1462 aa12.53□□□□□ -0.4
PRICKLE1-213ENST00000639589 EIF4G2P78344 907 aaKnown RBP eCLIP12.53□□□□□ -0.4
PRICKLE1-213ENST00000639589 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.4
PRICKLE1-213ENST00000639589 RSPH4AQ5TD94 716 aa12.52□□□□□ -0.41
PRICKLE1-213ENST00000639589 MYH16Q9H6N6 1097 aa12.52□□□□□ -0.41
PRICKLE1-213ENST00000639589 AQRO60306 1485 aaKnown RBP eCLIP12.51□□□□□ -0.41
PRICKLE1-213ENST00000639589 MRS2Q9HD23 443 aa12.5□□□□□ -0.41
PRICKLE1-213ENST00000639589 WASHC2CQ9Y4E1 1318 aa12.49□□□□□ -0.41
PRICKLE1-213ENST00000639589 CFAP53Q96M91 514 aa12.49□□□□□ -0.41
PRICKLE1-213ENST00000639589 NESP48681 1621 aa12.49□□□□□ -0.41
PRICKLE1-213ENST00000639589 CCDC18Q5T9S5 1454 aa12.49□□□□□ -0.41
PRICKLE1-213ENST00000639589 KIF3BO15066 747 aa12.48□□□□□ -0.41
PRICKLE1-213ENST00000639589 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
PRICKLE1-213ENST00000639589 FKBP8Q14318 412 aa12.46□□□□□ -0.41
PRICKLE1-213ENST00000639589 ARHGAP35Q9NRY4 1499 aa12.46□□□□□ -0.42
PRICKLE1-213ENST00000639589 NPHP1O15259 732 aa12.46□□□□□ -0.42
PRICKLE1-213ENST00000639589 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.42
PRICKLE1-213ENST00000639589 ANKRD30AQ9BXX3 1397 aa12.44□□□□□ -0.42
PRICKLE1-213ENST00000639589 LAMC3Q9Y6N6 1575 aa12.44□□□□□ -0.42
PRICKLE1-213ENST00000639589 MEX3CQ5U5Q3 659 aaKnown RBP12.44□□□□□ -0.42
PRICKLE1-213ENST00000639589 KNSTRNQ9Y448 316 aa12.43□□□□□ -0.42
PRICKLE1-213ENST00000639589 ANP32BQ92688 251 aaKnown RBP12.43□□□□□ -0.42
PRICKLE1-213ENST00000639589 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
PRICKLE1-213ENST00000639589 CFTRP13569 1480 aa12.42□□□□□ -0.42
PRICKLE1-213ENST00000639589 ARXQ96QS3 562 aa12.41□□□□□ -0.42
PRICKLE1-213ENST00000639589 PRG4Q92954 1404 aaPredicted RBP12.41□□□□□ -0.42
PRICKLE1-213ENST00000639589 HNRNPMP52272 730 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRICKLE1-213ENST00000639589 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
PRICKLE1-213ENST00000639589 CCDC136Q96JN2 1154 aa12.4□□□□□ -0.42
PRICKLE1-213ENST00000639589 PPM1GO15355 546 aaPredicted RBP12.39□□□□□ -0.43
PRICKLE1-213ENST00000639589 HIRIP3Q9BW71 556 aaPredicted RBP12.38□□□□□ -0.43
PRICKLE1-213ENST00000639589 SRPK2P78362 688 aaKnown RBP12.37□□□□□ -0.43
PRICKLE1-213ENST00000639589 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
PRICKLE1-213ENST00000639589 PAK3O75914 559 aaPredicted RBP12.36□□□□□ -0.43
PRICKLE1-213ENST00000639589 MAPK8IP3Q9UPT6 1336 aa12.36□□□□□ -0.43
PRICKLE1-213ENST00000639589 CSB-PGBD3P0DP91 1061 aa12.36□□□□□ -0.43
PRICKLE1-213ENST00000639589 NUDCQ9Y266 331 aa12.36□□□□□ -0.43
PRICKLE1-213ENST00000639589 STK26Q9P289 416 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms