RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, humanhuman

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-222ENST00000639447 IGF1RP08069 1367 aa25.62■■□□□ 1.69
GRN-222ENST00000639447 JPH4Q96JJ6 628 aa25.62■■□□□ 1.69
GRN-222ENST00000639447 KIAA0586Q9BVV6 1533 aa25.57■■□□□ 1.68
GRN-222ENST00000639447 CARMIL1Q5VZK9 1371 aa25.49■■□□□ 1.67
GRN-222ENST00000639447 ADCY10Q96PN6 1610 aa25.41■■□□□ 1.66
GRN-222ENST00000639447 IQGAP2Q13576 1575 aa25.38■■□□□ 1.65
GRN-222ENST00000639447 NPM1P06748 294 aaKnown RBP eCLIP25.37■■□□□ 1.65
GRN-222ENST00000639447 MAPKBP1O60336 1514 aa25.37■■□□□ 1.65
GRN-222ENST00000639447 KIF13AQ9H1H9 1805 aa25.36■■□□□ 1.65
GRN-222ENST00000639447 CARMIL2Q6F5E8 1435 aa25.34■■□□□ 1.65
GRN-222ENST00000639447 ABCC10Q5T3U5 1492 aa25.3■■□□□ 1.64
GRN-222ENST00000639447 RAPGEF2Q9Y4G8 1499 aa25.3■■□□□ 1.64
GRN-222ENST00000639447 PTPRGP23470 1445 aa25.3■■□□□ 1.64
GRN-222ENST00000639447 DIP2BQ9P265 1576 aa25.29■■□□□ 1.64
GRN-222ENST00000639447 TNIKQ9UKE5 1360 aa25.28■■□□□ 1.64
GRN-222ENST00000639447 FAM69CQ0P6D2 419 aa25.24■■□□□ 1.63
GRN-222ENST00000639447 TTBK1Q5TCY1 1321 aaPredicted RBP25.23■■□□□ 1.63
GRN-222ENST00000639447 DISP1Q96F81 1524 aa25.2■■□□□ 1.62
GRN-222ENST00000639447 UGGT2Q9NYU1 1516 aa25.2■■□□□ 1.62
GRN-222ENST00000639447 ABCC2Q92887 1545 aa25.19■■□□□ 1.62
GRN-222ENST00000639447 KIAA0556O60303 1618 aa25.16■■□□□ 1.62
GRN-222ENST00000639447 UHRF1BP1LA0JNW5 1464 aa25.14■■□□□ 1.62
GRN-222ENST00000639447 CTTNBP2Q8WZ74 1663 aa25.12■■□□□ 1.61
GRN-222ENST00000639447 UACAQ9BZF9 1416 aa25.12■■□□□ 1.61
GRN-222ENST00000639447 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
GRN-222ENST00000639447 ASXL2Q76L83 1435 aa25.07■■□□□ 1.6
GRN-222ENST00000639447 PLB1Q6P1J6 1458 aa25.07■■□□□ 1.6
GRN-222ENST00000639447 PRXQ9BXM0 1461 aa25.05■■□□□ 1.6
GRN-222ENST00000639447 KDM6BO15054 1643 aa25.05■■□□□ 1.6
GRN-222ENST00000639447 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
GRN-222ENST00000639447 KDM5BQ9UGL1 1544 aa25.01■■□□□ 1.59
GRN-222ENST00000639447 TSPOAP1O95153 1857 aa25.01■■□□□ 1.59
GRN-222ENST00000639447 GLI2P10070 1586 aa25.01■■□□□ 1.59
GRN-222ENST00000639447 ZCCHC11Q5TAX3 1644 aaKnown RBP24.99■■□□□ 1.59
GRN-222ENST00000639447 EPRSP07814 1512 aaKnown RBP24.92■■□□□ 1.58
GRN-222ENST00000639447 PPRC1Q5VV67 1664 aaKnown RBP24.9■■□□□ 1.58
GRN-222ENST00000639447 ABCA8O94911 1581 aa24.88■■□□□ 1.57
GRN-222ENST00000639447 WDR7Q9Y4E6 1490 aa24.88■■□□□ 1.57
GRN-222ENST00000639447 MAP3K4Q9Y6R4 1608 aa24.87■■□□□ 1.57
GRN-222ENST00000639447 EEA1Q15075 1411 aa24.85■■□□□ 1.57
GRN-222ENST00000639447 TEX14Q8IWB6 1497 aa24.84■■□□□ 1.57
GRN-222ENST00000639447 CSRNP3Q8WYN3 585 aa24.83■■□□□ 1.56
GRN-222ENST00000639447 SAMD9Q5K651 1589 aa24.77■■□□□ 1.56
GRN-222ENST00000639447 FAM9AQ8IZU1 332 aaPredicted RBP24.77■■□□□ 1.56
GRN-222ENST00000639447 CFAP43Q8NDM7 1665 aa24.71■■□□□ 1.55
GRN-222ENST00000639447 P3H3Q8IVL6 736 aa24.71■■□□□ 1.55
GRN-222ENST00000639447 COL17A1Q9UMD9 1497 aaPredicted RBP24.68■■□□□ 1.54
GRN-222ENST00000639447 CD109Q6YHK3 1445 aa24.67■■□□□ 1.54
GRN-222ENST00000639447 MAGI3Q5TCQ9 1506 aa24.67■■□□□ 1.54
GRN-222ENST00000639447 KCNH8Q96L42 1107 aa24.65■■□□□ 1.54
GRN-222ENST00000639447 KIF21BO75037 1637 aa24.65■■□□□ 1.54
GRN-222ENST00000639447 RAPGEF6Q8TEU7 1601 aa24.65■■□□□ 1.54
GRN-222ENST00000639447 ARID3CA6NKF2 412 aa24.64■■□□□ 1.54
GRN-222ENST00000639447 KDM4FA0A1W2PPD8 638 aa24.63■■□□□ 1.53
GRN-222ENST00000639447 ATP10BO94823 1461 aa24.63■■□□□ 1.53
GRN-222ENST00000639447 FHOD3Q2V2M9 1422 aa24.59■■□□□ 1.53
GRN-222ENST00000639447 RANGAP1P46060 587 aaPredicted RBP24.59■■□□□ 1.53
GRN-222ENST00000639447 ADGRL1O94910 1474 aa24.58■■□□□ 1.53
GRN-222ENST00000639447 EFCAB5A4FU69 1503 aa24.58■■□□□ 1.53
GRN-222ENST00000639447 NUP153P49790 1475 aaKnown RBP24.55■■□□□ 1.52
GRN-222ENST00000639447 ABCA9Q8IUA7 1624 aa24.54■■□□□ 1.52
GRN-222ENST00000639447 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.51■■□□□ 1.51
GRN-222ENST00000639447 HNRNPUL2Q1KMD3 747 aaKnown RBP24.51■■□□□ 1.51
GRN-222ENST00000639447 ARAP3Q8WWN8 1544 aa24.46■■□□□ 1.51
GRN-222ENST00000639447 CHIC1Q5VXU3 224 aa24.43■■□□□ 1.5
GRN-222ENST00000639447 PHLDB1Q86UU1 1377 aa24.42■■□□□ 1.5
GRN-222ENST00000639447 NEO1Q92859 1461 aa24.41■■□□□ 1.5
GRN-222ENST00000639447 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
GRN-222ENST00000639447 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
GRN-222ENST00000639447 PLEKHD1A6NEE1 506 aa24.35■■□□□ 1.49
GRN-222ENST00000639447 CDK13Q14004 1512 aaKnown RBP24.33■■□□□ 1.49
GRN-222ENST00000639447 HECW1Q76N89 1606 aa24.33■■□□□ 1.48
GRN-222ENST00000639447 FMN1Q68DA7 1419 aa24.32■■□□□ 1.48
GRN-222ENST00000639447 ARHGAP35Q9NRY4 1499 aa24.3■■□□□ 1.48
GRN-222ENST00000639447 CFAP74Q9C0B2 1584 aa24.3■■□□□ 1.48
GRN-222ENST00000639447 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.481e-6■■■■□ 23.9
GRN-222ENST00000639447 FRMPD1Q5SYB0 1578 aa24.3■■□□□ 1.48
GRN-222ENST00000639447 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
GRN-222ENST00000639447 RAPGEF3O95398 923 aa24.26■■□□□ 1.47
GRN-222ENST00000639447 FANCAO15360 1455 aa24.25■■□□□ 1.47
GRN-222ENST00000639447 DENND4BO75064 1496 aaPredicted RBP24.23■■□□□ 1.47
GRN-222ENST00000639447 AKNAQ7Z591 1439 aa24.22■■□□□ 1.47
GRN-222ENST00000639447 ARHGEF40Q8TER5 1519 aa24.22■■□□□ 1.47
GRN-222ENST00000639447 HECW2Q9P2P5 1572 aa24.21■■□□□ 1.47
GRN-222ENST00000639447 ATP1B4Q9UN42 357 aaPredicted RBP24.21■■□□□ 1.47
GRN-222ENST00000639447 RICTORQ6R327 1708 aa24.18■■□□□ 1.46
GRN-222ENST00000639447 KIF14Q15058 1648 aa24.15■■□□□ 1.46
GRN-222ENST00000639447 ZMYM4Q5VZL5 1548 aa24.14■■□□□ 1.46
GRN-222ENST00000639447 CDK11AQ9UQ88 783 aaPredicted RBP24.14■■□□□ 1.46
GRN-222ENST00000639447 ADAMTSL3P82987 1691 aa24.13■■□□□ 1.45
GRN-222ENST00000639447 PLCH2O75038 1416 aa24.13■■□□□ 1.45
GRN-222ENST00000639447 CLIP1P30622 1438 aa24.12■■□□□ 1.45
GRN-222ENST00000639447 BCORL1Q5H9F3 1711 aa24.11■■□□□ 1.45
GRN-222ENST00000639447 MYO5CQ9NQX4 1742 aa24.11■■□□□ 1.45
GRN-222ENST00000639447 TROQ12816 1431 aaPredicted RBP24.11■■□□□ 1.45
GRN-222ENST00000639447 ZFYVE16Q7Z3T8 1539 aa24.1■■□□□ 1.45
GRN-222ENST00000639447 ARID4BQ4LE39 1312 aaPredicted RBP24.1■■□□□ 1.45
GRN-222ENST00000639447 PCF11O94913 1555 aaKnown RBP24.1■■□□□ 1.45
GRN-222ENST00000639447 POGZQ7Z3K3 1410 aa24.09■■□□□ 1.45
GRN-222ENST00000639447 PTPRMP28827 1452 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms