RNA–Protein interactions for RNA: ENST00000639243.1

GFAP-232, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5

Gene GFAP, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-232ENST00000639243 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
GFAP-232ENST00000639243 RAPGEF2Q9Y4G8 1499 aa22.28■■□□□ 1.16
GFAP-232ENST00000639243 ERCC6L2Q5T890 1561 aa22.27■■□□□ 1.16
GFAP-232ENST00000639243 CSRNP3Q8WYN3 585 aa22.25■■□□□ 1.15
GFAP-232ENST00000639243 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
GFAP-232ENST00000639243 KIAA0586Q9BVV6 1533 aa22.23■■□□□ 1.15
GFAP-232ENST00000639243 PRG4Q92954 1404 aaPredicted RBP22.22■■□□□ 1.15
GFAP-232ENST00000639243 PRXQ9BXM0 1461 aa22.18■■□□□ 1.14
GFAP-232ENST00000639243 EEA1Q15075 1411 aa22.16■■□□□ 1.14
GFAP-232ENST00000639243 IQGAP2Q13576 1575 aa22.12■■□□□ 1.13
GFAP-232ENST00000639243 EHMT2Q96KQ7 1210 aa22.09■■□□□ 1.13
GFAP-232ENST00000639243 TTBK1Q5TCY1 1321 aaPredicted RBP22.09■■□□□ 1.13
GFAP-232ENST00000639243 CTTNBP2Q8WZ74 1663 aa22.05■■□□□ 1.12
GFAP-232ENST00000639243 CARMIL2Q6F5E8 1435 aa22.01■■□□□ 1.11
GFAP-232ENST00000639243 UGGT2Q9NYU1 1516 aa21.98■■□□□ 1.11
GFAP-232ENST00000639243 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
GFAP-232ENST00000639243 DISP1Q96F81 1524 aa21.97■■□□□ 1.11
GFAP-232ENST00000639243 PTPRGP23470 1445 aa21.96■■□□□ 1.11
GFAP-232ENST00000639243 KIF21BO75037 1637 aa21.95■■□□□ 1.1
GFAP-232ENST00000639243 TNIKQ9UKE5 1360 aa21.95■■□□□ 1.1
GFAP-232ENST00000639243 TRHP20396 242 aaPredicted RBP21.93■■□□□ 1.1
GFAP-232ENST00000639243 UBTFP17480 764 aaKnown RBP21.91■■□□□ 1.1
GFAP-232ENST00000639243 P3H3Q8IVL6 736 aa21.91■■□□□ 1.1
GFAP-232ENST00000639243 KIAA0556O60303 1618 aa21.9■■□□□ 1.1
GFAP-232ENST00000639243 GOLGA3Q08378 1498 aa21.86■■□□□ 1.09
GFAP-232ENST00000639243 NPM1P06748 294 aaKnown RBP eCLIP21.86■■□□□ 1.09
GFAP-232ENST00000639243 ADCY10Q96PN6 1610 aa21.86■■□□□ 1.09
GFAP-232ENST00000639243 UACAQ9BZF9 1416 aa21.79■■□□□ 1.08
GFAP-232ENST00000639243 SAMD9Q5K651 1589 aa21.75■■□□□ 1.07
GFAP-232ENST00000639243 PLB1Q6P1J6 1458 aa21.74■■□□□ 1.07
GFAP-232ENST00000639243 ABCC2Q92887 1545 aa21.72■■□□□ 1.07
GFAP-232ENST00000639243 UHRF1BP1LA0JNW5 1464 aa21.71■■□□□ 1.07
GFAP-232ENST00000639243 FHOD3Q2V2M9 1422 aa21.71■■□□□ 1.07
GFAP-232ENST00000639243 ARID3CA6NKF2 412 aa21.68■■□□□ 1.06
GFAP-232ENST00000639243 ABCA8O94911 1581 aa21.66■■□□□ 1.06
GFAP-232ENST00000639243 MAPKBP1O60336 1514 aa21.65■■□□□ 1.06
GFAP-232ENST00000639243 FAM69CQ0P6D2 419 aa21.65■■□□□ 1.06
GFAP-232ENST00000639243 EFCAB5A4FU69 1503 aa21.63■■□□□ 1.05
GFAP-232ENST00000639243 KDM5BQ9UGL1 1544 aa21.63■■□□□ 1.05
GFAP-232ENST00000639243 ZCCHC11Q5TAX3 1644 aaKnown RBP21.62■■□□□ 1.05
GFAP-232ENST00000639243 KIF13AQ9H1H9 1805 aa21.62■■□□□ 1.05
GFAP-232ENST00000639243 ASXL2Q76L83 1435 aa21.61■■□□□ 1.05
GFAP-232ENST00000639243 LOC105371045A0A1W2PR82 267 aa21.61■■□□□ 1.05
GFAP-232ENST00000639243 ARHGAP35Q9NRY4 1499 aa21.6■■□□□ 1.05
GFAP-232ENST00000639243 ABCC10Q5T3U5 1492 aa21.59■■□□□ 1.05
GFAP-232ENST00000639243 RAPGEF6Q8TEU7 1601 aa21.58■■□□□ 1.04
GFAP-232ENST00000639243 DIP2BQ9P265 1576 aa21.55■■□□□ 1.04
GFAP-232ENST00000639243 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
GFAP-232ENST00000639243 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
GFAP-232ENST00000639243 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
GFAP-232ENST00000639243 ATP10BO94823 1461 aa21.53■■□□□ 1.04
GFAP-232ENST00000639243 KCNH8Q96L42 1107 aa21.52■■□□□ 1.04
GFAP-232ENST00000639243 TSPOAP1O95153 1857 aa21.5■■□□□ 1.03
GFAP-232ENST00000639243 CLIP1P30622 1438 aa21.49■■□□□ 1.03
GFAP-232ENST00000639243 NUP153P49790 1475 aaKnown RBP21.49■■□□□ 1.03
GFAP-232ENST00000639243 FMN1Q68DA7 1419 aa21.48■■□□□ 1.03
GFAP-232ENST00000639243 WDR7Q9Y4E6 1490 aa21.47■■□□□ 1.03
GFAP-232ENST00000639243 EPRSP07814 1512 aaKnown RBP21.46■■□□□ 1.03
GFAP-232ENST00000639243 GLI2P10070 1586 aa21.41■■□□□ 1.02
GFAP-232ENST00000639243 CEP162Q5TB80 1403 aa21.4■■□□□ 1.02
GFAP-232ENST00000639243 CDK13Q14004 1512 aaKnown RBP21.39■■□□□ 1.01
GFAP-232ENST00000639243 PLEKHD1A6NEE1 506 aa21.38■■□□□ 1.01
GFAP-232ENST00000639243 HECW1Q76N89 1606 aa21.36■■□□□ 1.01
GFAP-232ENST00000639243 MAP3K4Q9Y6R4 1608 aa21.34■■□□□ 1.01
GFAP-232ENST00000639243 PCF11O94913 1555 aaKnown RBP21.33■■□□□ 1.01
GFAP-232ENST00000639243 PPRC1Q5VV67 1664 aaKnown RBP21.33■■□□□ 1
GFAP-232ENST00000639243 CD109Q6YHK3 1445 aa21.32■■□□□ 1
GFAP-232ENST00000639243 CASKIN1Q8WXD9 1431 aa21.32■■□□□ 1
GFAP-232ENST00000639243 LRRIQ1Q96JM4 1722 aa21.31■■□□□ 1
GFAP-232ENST00000639243 CFAP43Q8NDM7 1665 aa21.28■■□□□ 1
GFAP-232ENST00000639243 CDK11AQ9UQ88 783 aaPredicted RBP21.27■□□□□ 0.99
GFAP-232ENST00000639243 FYCO1Q9BQS8 1478 aa21.24■□□□□ 0.99
GFAP-232ENST00000639243 KDM6BO15054 1643 aa21.23■□□□□ 0.99
GFAP-232ENST00000639243 ABCA9Q8IUA7 1624 aa21.23■□□□□ 0.99
GFAP-232ENST00000639243 TEX14Q8IWB6 1497 aa21.23■□□□□ 0.99
GFAP-232ENST00000639243 MAGI3Q5TCQ9 1506 aa21.2■□□□□ 0.99
GFAP-232ENST00000639243 CCDC18Q5T9S5 1454 aa21.2■□□□□ 0.98
GFAP-232ENST00000639243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.18■□□□□ 0.98
GFAP-232ENST00000639243 TROQ12816 1431 aaPredicted RBP21.17■□□□□ 0.98
GFAP-232ENST00000639243 COL17A1Q9UMD9 1497 aaPredicted RBP21.17■□□□□ 0.98
GFAP-232ENST00000639243 TTC37Q6PGP7 1564 aa21.16■□□□□ 0.98
GFAP-232ENST00000639243 KIF14Q15058 1648 aa21.14■□□□□ 0.98
GFAP-232ENST00000639243 VPS8Q8N3P4 1428 aa21.11■□□□□ 0.97
GFAP-232ENST00000639243 MTUS2Q5JR59 1369 aa21.06■□□□□ 0.96
GFAP-232ENST00000639243 FANCAO15360 1455 aa21.06■□□□□ 0.96
GFAP-232ENST00000639243 PLCH2O75038 1416 aa21.06■□□□□ 0.96
GFAP-232ENST00000639243 MYO5CQ9NQX4 1742 aa21.05■□□□□ 0.96
GFAP-232ENST00000639243 NEO1Q92859 1461 aa21.05■□□□□ 0.96
GFAP-232ENST00000639243 RAPGEF3O95398 923 aa21.05■□□□□ 0.96
GFAP-232ENST00000639243 AEBP2Q6ZN18 517 aaPredicted RBP21.05■□□□□ 0.96
GFAP-232ENST00000639243 AKNAQ7Z591 1439 aa21.03■□□□□ 0.96
GFAP-232ENST00000639243 ARAP3Q8WWN8 1544 aa21.03■□□□□ 0.96
GFAP-232ENST00000639243 PHLDB1Q86UU1 1377 aa21.03■□□□□ 0.96
GFAP-232ENST00000639243 EFCAB2Q5VUJ9 269 aa21.02■□□□□ 0.95
GFAP-232ENST00000639243 ARHGAP5Q13017 1502 aa20.99■□□□□ 0.95
GFAP-232ENST00000639243 CFAP74Q9C0B2 1584 aa20.98■□□□□ 0.95
GFAP-232ENST00000639243 CDC42BPBQ9Y5S2 1711 aa20.98■□□□□ 0.95
GFAP-232ENST00000639243 TIAM1Q13009 1591 aa20.98■□□□□ 0.95
GFAP-232ENST00000639243 CDC42BPAQ5VT25 1732 aa20.96■□□□□ 0.95
GFAP-232ENST00000639243 EHBP1L1Q8N3D4 1523 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms