RNA–Protein interactions for RNA: ENST00000639145.1

SCARB2-215, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 4,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-215ENST00000639145 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
SCARB2-215ENST00000639145 RUSC2Q8N2Y8 1516 aa18.77■□□□□ 0.6
SCARB2-215ENST00000639145 ARID4BQ4LE39 1312 aaPredicted RBP18.77■□□□□ 0.6
SCARB2-215ENST00000639145 PDS5BQ9NTI5 1447 aa18.77■□□□□ 0.59
SCARB2-215ENST00000639145 ATAD2BQ9ULI0 1458 aa18.76■□□□□ 0.59
SCARB2-215ENST00000639145 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
SCARB2-215ENST00000639145 RGL3Q3MIN7 710 aa18.74■□□□□ 0.59
SCARB2-215ENST00000639145 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
SCARB2-215ENST00000639145 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
SCARB2-215ENST00000639145 EIF4G1Q04637 1599 aaKnown RBP18.69■□□□□ 0.58
SCARB2-215ENST00000639145 KANK4Q5T7N3 995 aaPredicted RBP18.68■□□□□ 0.58
SCARB2-215ENST00000639145 CADPSQ9ULU8 1353 aa18.67■□□□□ 0.58
SCARB2-215ENST00000639145 CANXP27824 592 aaKnown RBP18.66■□□□□ 0.58
SCARB2-215ENST00000639145 PPP1R15AO75807 674 aaPredicted RBP18.66■□□□□ 0.58
SCARB2-215ENST00000639145 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
SCARB2-215ENST00000639145 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
SCARB2-215ENST00000639145 SALL2Q9Y467 1007 aaPredicted RBP18.64■□□□□ 0.58
SCARB2-215ENST00000639145 TOP2AP11388 1531 aaKnown RBP18.63■□□□□ 0.57
SCARB2-215ENST00000639145 FAM9BQ8IZU0 186 aa18.61■□□□□ 0.57
SCARB2-215ENST00000639145 ZBTB47Q9UFB7 747 aaPredicted RBP18.59■□□□□ 0.57
SCARB2-215ENST00000639145 SCAF1Q9H7N4 1312 aaKnown RBP18.59■□□□□ 0.57
SCARB2-215ENST00000639145 GTF3C3Q9Y5Q9 886 aa18.58■□□□□ 0.56
SCARB2-215ENST00000639145 MLECQ14165 292 aa18.56■□□□□ 0.56
SCARB2-215ENST00000639145 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
SCARB2-215ENST00000639145 C14orf37Q86TY3 774 aa18.55■□□□□ 0.56
SCARB2-215ENST00000639145 SENP3-EIF4A1A0A087X0R7 540 aa18.53■□□□□ 0.56
SCARB2-215ENST00000639145 HNRNPUQ00839 825 aaKnown RBP eCLIP18.53■□□□□ 0.56
SCARB2-215ENST00000639145 SIN3AQ96ST3 1273 aa18.53■□□□□ 0.56
SCARB2-215ENST00000639145 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
SCARB2-215ENST00000639145 TMC1Q8TDI8 760 aa18.53■□□□□ 0.56
SCARB2-215ENST00000639145 EIF4G2P78344 907 aaKnown RBP eCLIP18.51■□□□□ 0.55
SCARB2-215ENST00000639145 RAPGEF2Q9Y4G8 1499 aa18.49■□□□□ 0.55
SCARB2-215ENST00000639145 CARMIL2Q6F5E8 1435 aa18.46■□□□□ 0.55
SCARB2-215ENST00000639145 ZBTB7CA1YPR0 619 aa18.45■□□□□ 0.54
SCARB2-215ENST00000639145 MRS2Q9HD23 443 aa18.44■□□□□ 0.54
SCARB2-215ENST00000639145 GGT6Q6P531 493 aa18.43■□□□□ 0.54
SCARB2-215ENST00000639145 JPH4Q96JJ6 628 aa18.43■□□□□ 0.54
SCARB2-215ENST00000639145 A0A0G2JS52 829 aa18.41■□□□□ 0.54
SCARB2-215ENST00000639145 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
SCARB2-215ENST00000639145 FOXD1Q16676 465 aa18.39■□□□□ 0.53
SCARB2-215ENST00000639145 FANCD2Q9BXW9 1451 aa18.39■□□□□ 0.53
SCARB2-215ENST00000639145 MIER1Q8N108 512 aa18.39■□□□□ 0.53
SCARB2-215ENST00000639145 CARD11Q9BXL7 1154 aa18.39■□□□□ 0.53
SCARB2-215ENST00000639145 NESP48681 1621 aa18.38■□□□□ 0.53
SCARB2-215ENST00000639145 RAD54L2Q9Y4B4 1467 aa18.37■□□□□ 0.53
SCARB2-215ENST00000639145 FHOD3Q2V2M9 1422 aa18.35■□□□□ 0.53
SCARB2-215ENST00000639145 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
SCARB2-215ENST00000639145 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.52
SCARB2-215ENST00000639145 CYB5RLQ6IPT4 315 aa18.32■□□□□ 0.52
SCARB2-215ENST00000639145 ACIN1Q9UKV3 1341 aaKnown RBP18.32■□□□□ 0.52
SCARB2-215ENST00000639145 POGKQ9P215 609 aa18.31■□□□□ 0.52
SCARB2-215ENST00000639145 PPM1GO15355 546 aaPredicted RBP18.31■□□□□ 0.52
SCARB2-215ENST00000639145 DCAF11Q8TEB1 546 aa18.31■□□□□ 0.52
SCARB2-215ENST00000639145 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
SCARB2-215ENST00000639145 FKBP8Q14318 412 aa18.29■□□□□ 0.52
SCARB2-215ENST00000639145 FMN1Q68DA7 1419 aa18.28■□□□□ 0.52
SCARB2-215ENST00000639145 HAP1P54257 671 aaPredicted RBP18.27■□□□□ 0.52
SCARB2-215ENST00000639145 PKD2Q13563 968 aa18.25■□□□□ 0.51
SCARB2-215ENST00000639145 HNRNPMP52272 730 aaKnown RBP eCLIP18.25■□□□□ 0.51
SCARB2-215ENST00000639145 KNSTRNQ9Y448 316 aa18.24■□□□□ 0.51
SCARB2-215ENST00000639145 KANK1Q14678 1352 aa18.23■□□□□ 0.51
SCARB2-215ENST00000639145 SAFB2Q14151 953 aaKnown RBP eCLIP18.23■□□□□ 0.51
SCARB2-215ENST00000639145 ARHGAP35Q9NRY4 1499 aa18.23■□□□□ 0.51
SCARB2-215ENST00000639145 RTL5Q5HYW3 569 aaPredicted RBP18.23■□□□□ 0.51
SCARB2-215ENST00000639145 OSCARQ8IYS5 282 aa18.23■□□□□ 0.51
SCARB2-215ENST00000639145 NCAPD3P42695 1498 aa18.23■□□□□ 0.51
SCARB2-215ENST00000639145 IGF1RP08069 1367 aa18.22■□□□□ 0.51
SCARB2-215ENST00000639145 CDCA8Q53HL2 280 aa18.22■□□□□ 0.51
SCARB2-215ENST00000639145 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
SCARB2-215ENST00000639145 KIF3BO15066 747 aa18.21■□□□□ 0.51
SCARB2-215ENST00000639145 AQRO60306 1485 aaKnown RBP eCLIP18.2■□□□□ 0.5
SCARB2-215ENST00000639145 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
SCARB2-215ENST00000639145 TNNT2P45379 298 aaPredicted RBP18.2■□□□□ 0.5
SCARB2-215ENST00000639145 STK26Q9P289 416 aa18.16■□□□□ 0.5
SCARB2-215ENST00000639145 NUP155O75694 1391 aa18.16■□□□□ 0.5
SCARB2-215ENST00000639145 NPM2Q86SE8 214 aaKnown RBP18.15■□□□□ 0.5
SCARB2-215ENST00000639145 IRX6P78412 446 aaPredicted RBP18.14■□□□□ 0.5
SCARB2-215ENST00000639145 PTPRGP23470 1445 aa18.14■□□□□ 0.49
SCARB2-215ENST00000639145 NEUROD2Q15784 382 aa18.14■□□□□ 0.49
SCARB2-215ENST00000639145 SETD5Q9C0A6 1442 aa18.13■□□□□ 0.49
SCARB2-215ENST00000639145 SPAG9O60271 1321 aaKnown RBP18.13■□□□□ 0.49
SCARB2-215ENST00000639145 SOX12O15370 315 aa18.12■□□□□ 0.49
SCARB2-215ENST00000639145 CFAP53Q96M91 514 aa18.12■□□□□ 0.49
SCARB2-215ENST00000639145 CC2D2AQ9P2K1 1620 aa18.11■□□□□ 0.49
SCARB2-215ENST00000639145 MPHOSPH9Q99550 1183 aa18.1■□□□□ 0.49
SCARB2-215ENST00000639145 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
SCARB2-215ENST00000639145 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
SCARB2-215ENST00000639145 GAPVD1Q14C86 1478 aa18.1■□□□□ 0.49
SCARB2-215ENST00000639145 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
SCARB2-215ENST00000639145 CC2D1BQ5T0F9 858 aaKnown RBP18.09■□□□□ 0.49
SCARB2-215ENST00000639145 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.09■□□□□ 0.49
SCARB2-215ENST00000639145 CCDC136Q96JN2 1154 aa18.09■□□□□ 0.49
SCARB2-215ENST00000639145 ANKRD30AQ9BXX3 1397 aa18.08■□□□□ 0.49
SCARB2-215ENST00000639145 RAB3GAP2Q9H2M9 1393 aa18.06■□□□□ 0.48
SCARB2-215ENST00000639145 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
SCARB2-215ENST00000639145 TMF1P82094 1093 aa18.05■□□□□ 0.48
SCARB2-215ENST00000639145 WASHC2CQ9Y4E1 1318 aa18.05■□□□□ 0.48
SCARB2-215ENST00000639145 ARXQ96QS3 562 aa18.04■□□□□ 0.48
SCARB2-215ENST00000639145 ZNF644Q9H582 1327 aaPredicted RBP18.03■□□□□ 0.48
SCARB2-215ENST00000639145 MYT1Q01538 1121 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms