RNA–Protein interactions for RNA: ENST00000639064.1

HNRNPU-218, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,625 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-218ENST00000639064 SYNJ2O15056 1496 aa14.6□□□□□ -0.07
HNRNPU-218ENST00000639064 CEP162Q5TB80 1403 aa14.59□□□□□ -0.07
HNRNPU-218ENST00000639064 GRIN2AQ12879 1464 aa14.59□□□□□ -0.07
HNRNPU-218ENST00000639064 CTTNBP2Q8WZ74 1663 aa14.53□□□□□ -0.08
HNRNPU-218ENST00000639064 CLIP1P30622 1438 aa14.52□□□□□ -0.08
HNRNPU-218ENST00000639064 CHD1O14646 1710 aa14.51□□□□□ -0.09
HNRNPU-218ENST00000639064 CEP170Q5SW79 1584 aa14.51□□□□□ -0.09
HNRNPU-218ENST00000639064 NUP160Q12769 1436 aa14.48□□□□□ -0.09
HNRNPU-218ENST00000639064 KIAA0586Q9BVV6 1533 aa14.46□□□□□ -0.09
HNRNPU-218ENST00000639064 IQGAP2Q13576 1575 aa14.46□□□□□ -0.09
HNRNPU-218ENST00000639064 ARHGAP35Q9NRY4 1499 aa14.46□□□□□ -0.09
HNRNPU-218ENST00000639064 P3H3Q8IVL6 736 aa14.45□□□□□ -0.1
HNRNPU-218ENST00000639064 ARAP1Q96P48 1450 aa14.43□□□□□ -0.1
HNRNPU-218ENST00000639064 FHOD3Q2V2M9 1422 aa14.39□□□□□ -0.11
HNRNPU-218ENST00000639064 JPH4Q96JJ6 628 aa14.39□□□□□ -0.11
HNRNPU-218ENST00000639064 UGGT2Q9NYU1 1516 aa14.38□□□□□ -0.11
HNRNPU-218ENST00000639064 EFCAB5A4FU69 1503 aa14.38□□□□□ -0.11
HNRNPU-218ENST00000639064 SAMD9Q5K651 1589 aa14.38□□□□□ -0.11
HNRNPU-218ENST00000639064 VPS8Q8N3P4 1428 aa14.35□□□□□ -0.11
HNRNPU-218ENST00000639064 DISP1Q96F81 1524 aa14.35□□□□□ -0.11
HNRNPU-218ENST00000639064 CLASP1Q7Z460 1538 aa14.35□□□□□ -0.11
HNRNPU-218ENST00000639064 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
HNRNPU-218ENST00000639064 KIAA0556O60303 1618 aa14.33□□□□□ -0.12
HNRNPU-218ENST00000639064 TTBK1Q5TCY1 1321 aaPredicted RBP14.32□□□□□ -0.12
HNRNPU-218ENST00000639064 PRG4Q92954 1404 aaPredicted RBP14.31□□□□□ -0.12
HNRNPU-218ENST00000639064 TRIM26Q12899 539 aaPredicted RBP14.3□□□□□ -0.12
HNRNPU-218ENST00000639064 SHROOM2Q13796 1616 aa14.3□□□□□ -0.12
HNRNPU-218ENST00000639064 CARMIL2Q6F5E8 1435 aa14.28□□□□□ -0.12
HNRNPU-218ENST00000639064 ERCC6L2Q5T890 1561 aa14.28□□□□□ -0.12
HNRNPU-218ENST00000639064 FMN1Q68DA7 1419 aa14.27□□□□□ -0.13
HNRNPU-218ENST00000639064 PCF11O94913 1555 aaKnown RBP14.25□□□□□ -0.13
HNRNPU-218ENST00000639064 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
HNRNPU-218ENST00000639064 CASKIN1Q8WXD9 1431 aa14.22□□□□□ -0.13
HNRNPU-218ENST00000639064 APLP2Q06481 763 aa14.2□□□□□ -0.14
HNRNPU-218ENST00000639064 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
HNRNPU-218ENST00000639064 PLB1Q6P1J6 1458 aa14.19□□□□□ -0.14
HNRNPU-218ENST00000639064 PTPRGP23470 1445 aa14.19□□□□□ -0.14
HNRNPU-218ENST00000639064 ARID3CA6NKF2 412 aa14.18□□□□□ -0.14
HNRNPU-218ENST00000639064 KANK4Q5T7N3 995 aaPredicted RBP14.16□□□□□ -0.14
HNRNPU-218ENST00000639064 LRRIQ1Q96JM4 1722 aa14.15□□□□□ -0.14
HNRNPU-218ENST00000639064 RAPGEF6Q8TEU7 1601 aa14.15□□□□□ -0.14
HNRNPU-218ENST00000639064 TIAM1Q13009 1591 aa14.14□□□□□ -0.15
HNRNPU-218ENST00000639064 HECW1Q76N89 1606 aa14.14□□□□□ -0.15
HNRNPU-218ENST00000639064 NUP153P49790 1475 aaKnown RBP14.14□□□□□ -0.15
HNRNPU-218ENST00000639064 ABCA8O94911 1581 aa14.13□□□□□ -0.15
HNRNPU-218ENST00000639064 EPRSP07814 1512 aaKnown RBP14.12□□□□□ -0.15
HNRNPU-218ENST00000639064 CDK13Q14004 1512 aaKnown RBP14.12□□□□□ -0.15
HNRNPU-218ENST00000639064 CFAP43Q8NDM7 1665 aa14.1□□□□□ -0.15
HNRNPU-218ENST00000639064 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
HNRNPU-218ENST00000639064 UACAQ9BZF9 1416 aa14.1□□□□□ -0.15
HNRNPU-218ENST00000639064 ZEB1P37275 1124 aaPredicted RBP14.1□□□□□ -0.15
HNRNPU-218ENST00000639064 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
HNRNPU-218ENST00000639064 CCDC18Q5T9S5 1454 aa14.08□□□□□ -0.16
HNRNPU-218ENST00000639064 LRRC9Q6ZRR7 1453 aa14.08□□□□□ -0.16
HNRNPU-218ENST00000639064 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.08□□□□□ -0.16
HNRNPU-218ENST00000639064 HNRNPUL2Q1KMD3 747 aaKnown RBP14.08□□□□□ -0.16
HNRNPU-218ENST00000639064 MAGI3Q5TCQ9 1506 aa14.05□□□□□ -0.16
HNRNPU-218ENST00000639064 ABCC2Q92887 1545 aa14.05□□□□□ -0.16
HNRNPU-218ENST00000639064 ATP10BO94823 1461 aa14.05□□□□□ -0.16
HNRNPU-218ENST00000639064 MTUS2Q5JR59 1369 aa14.04□□□□□ -0.16
HNRNPU-218ENST00000639064 RIMBP3CA6NJZ7 1639 aa14.04□□□□□ -0.16
HNRNPU-218ENST00000639064 RIMBP3BA6NNM3 1639 aa14.04□□□□□ -0.16
HNRNPU-218ENST00000639064 RIMBP3Q9UFD9 1639 aa14.04□□□□□ -0.16
HNRNPU-218ENST00000639064 PELP1Q8IZL8 1130 aaKnown RBP14.02□□□□□ -0.16
HNRNPU-218ENST00000639064 ADCY10Q96PN6 1610 aa14.02□□□□□ -0.17
HNRNPU-218ENST00000639064 UHRF1BP1LA0JNW5 1464 aa14.01□□□□□ -0.17
HNRNPU-218ENST00000639064 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
HNRNPU-218ENST00000639064 CYB5RLQ6IPT4 315 aa14□□□□□ -0.17
HNRNPU-218ENST00000639064 EHBP1L1Q8N3D4 1523 aa13.99□□□□□ -0.17
HNRNPU-218ENST00000639064 CDK11AQ9UQ88 783 aaPredicted RBP13.99□□□□□ -0.17
HNRNPU-218ENST00000639064 KDM5BQ9UGL1 1544 aa13.97□□□□□ -0.17
HNRNPU-218ENST00000639064 ZCCHC11Q5TAX3 1644 aaKnown RBP13.97□□□□□ -0.17
HNRNPU-218ENST00000639064 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
HNRNPU-218ENST00000639064 PLEKHD1A6NEE1 506 aa13.96□□□□□ -0.17
HNRNPU-218ENST00000639064 TROQ12816 1431 aaPredicted RBP13.96□□□□□ -0.17
HNRNPU-218ENST00000639064 NCOA2Q15596 1464 aa13.96□□□□□ -0.18
HNRNPU-218ENST00000639064 SUPT6HQ7KZ85 1726 aaKnown RBP13.94□□□□□ -0.18
HNRNPU-218ENST00000639064 KIF14Q15058 1648 aa13.93□□□□□ -0.18
HNRNPU-218ENST00000639064 NPM1P06748 294 aaKnown RBP eCLIP13.9□□□□□ -0.18
HNRNPU-218ENST00000639064 KCNH8Q96L42 1107 aa13.9□□□□□ -0.18
HNRNPU-218ENST00000639064 RRBP1Q9P2E9 1410 aaKnown RBP13.88□□□□□ -0.19
HNRNPU-218ENST00000639064 MYOM3Q5VTT5 1437 aa13.87□□□□□ -0.19
HNRNPU-218ENST00000639064 ASXL2Q76L83 1435 aa13.87□□□□□ -0.19
HNRNPU-218ENST00000639064 CCNB3Q8WWL7 1395 aa13.87□□□□□ -0.19
HNRNPU-218ENST00000639064 WDR7Q9Y4E6 1490 aa13.86□□□□□ -0.19
HNRNPU-218ENST00000639064 ABCC10Q5T3U5 1492 aa13.86□□□□□ -0.19
HNRNPU-218ENST00000639064 FGD6Q6ZV73 1430 aa13.85□□□□□ -0.19
HNRNPU-218ENST00000639064 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
HNRNPU-218ENST00000639064 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.84□□□□□ -0.19
HNRNPU-218ENST00000639064 GPATCH8Q9UKJ3 1502 aaKnown RBP13.83□□□□□ -0.2
HNRNPU-218ENST00000639064 TTC37Q6PGP7 1564 aa13.82□□□□□ -0.2
HNRNPU-218ENST00000639064 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
HNRNPU-218ENST00000639064 ITGAEP38570 1179 aa13.81□□□□□ -0.2
HNRNPU-218ENST00000639064 ZNF644Q9H582 1327 aaPredicted RBP13.8□□□□□ -0.2
HNRNPU-218ENST00000639064 CDC42BPAQ5VT25 1732 aa13.8□□□□□ -0.2
HNRNPU-218ENST00000639064 CFDP1Q9UEE9 299 aaPredicted RBP13.8□□□□□ -0.2
HNRNPU-218ENST00000639064 PTPN23Q9H3S7 1636 aa13.8□□□□□ -0.2
HNRNPU-218ENST00000639064 MIA2Q96PC5 1412 aa13.79□□□□□ -0.2
HNRNPU-218ENST00000639064 MAPKBP1O60336 1514 aa13.79□□□□□ -0.2
HNRNPU-218ENST00000639064 ZNF777Q9ULD5 760 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms