RNA–Protein interactions for RNA: ENST00000638878.1

PAX6-242, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-242ENST00000638878 PLPPR3Q6T4P5 718 aa16.31■□□□□ 0.2
PAX6-242ENST00000638878 EEA1Q15075 1411 aa16.3■□□□□ 0.2
PAX6-242ENST00000638878 KIAA0586Q9BVV6 1533 aa16.28■□□□□ 0.2
PAX6-242ENST00000638878 JPH4Q96JJ6 628 aa16.27■□□□□ 0.2
PAX6-242ENST00000638878 RAPGEF2Q9Y4G8 1499 aa16.27■□□□□ 0.2
PAX6-242ENST00000638878 CSRNP3Q8WYN3 585 aa16.26■□□□□ 0.19
PAX6-242ENST00000638878 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
PAX6-242ENST00000638878 PRXQ9BXM0 1461 aa16.25■□□□□ 0.19
PAX6-242ENST00000638878 SHROOM2Q13796 1616 aa16.25■□□□□ 0.19
PAX6-242ENST00000638878 ARAP1Q96P48 1450 aa16.18■□□□□ 0.18
PAX6-242ENST00000638878 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
PAX6-242ENST00000638878 PRG4Q92954 1404 aaPredicted RBP16.17■□□□□ 0.18
PAX6-242ENST00000638878 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
PAX6-242ENST00000638878 CARMIL2Q6F5E8 1435 aa16.1■□□□□ 0.17
PAX6-242ENST00000638878 ERCC6L2Q5T890 1561 aa16.09■□□□□ 0.17
PAX6-242ENST00000638878 UGGT2Q9NYU1 1516 aa16.08■□□□□ 0.16
PAX6-242ENST00000638878 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
PAX6-242ENST00000638878 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
PAX6-242ENST00000638878 KIF21BO75037 1637 aa16.04■□□□□ 0.16
PAX6-242ENST00000638878 DISP1Q96F81 1524 aa16.02■□□□□ 0.16
PAX6-242ENST00000638878 CTTNBP2Q8WZ74 1663 aa16.02■□□□□ 0.15
PAX6-242ENST00000638878 PTPRGP23470 1445 aa16.01■□□□□ 0.15
PAX6-242ENST00000638878 GOLGA3Q08378 1498 aa16.01■□□□□ 0.15
PAX6-242ENST00000638878 KIAA0556O60303 1618 aa15.93■□□□□ 0.14
PAX6-242ENST00000638878 NPM1P06748 294 aaKnown RBP eCLIP15.93■□□□□ 0.14
PAX6-242ENST00000638878 UHRF1BP1LA0JNW5 1464 aa15.93■□□□□ 0.14
PAX6-242ENST00000638878 SLC24A1O60721 1099 aa15.92■□□□□ 0.14
PAX6-242ENST00000638878 UACAQ9BZF9 1416 aa15.9■□□□□ 0.14
PAX6-242ENST00000638878 UBTFP17480 764 aaKnown RBP15.9■□□□□ 0.14
PAX6-242ENST00000638878 SAMD9Q5K651 1589 aa15.87■□□□□ 0.13
PAX6-242ENST00000638878 ADCY10Q96PN6 1610 aa15.87■□□□□ 0.13
PAX6-242ENST00000638878 ABCC2Q92887 1545 aa15.85■□□□□ 0.13
PAX6-242ENST00000638878 MAPKBP1O60336 1514 aa15.85■□□□□ 0.13
PAX6-242ENST00000638878 EFCAB5A4FU69 1503 aa15.84■□□□□ 0.13
PAX6-242ENST00000638878 KDM5BQ9UGL1 1544 aa15.83■□□□□ 0.12
PAX6-242ENST00000638878 HRCP23327 699 aa15.82■□□□□ 0.12
PAX6-242ENST00000638878 ABCA8O94911 1581 aa15.8■□□□□ 0.12
PAX6-242ENST00000638878 KCNA4P22459 653 aa15.8■□□□□ 0.12
PAX6-242ENST00000638878 TTBK1Q5TCY1 1321 aaPredicted RBP15.79■□□□□ 0.12
PAX6-242ENST00000638878 P3H3Q8IVL6 736 aa15.79■□□□□ 0.12
PAX6-242ENST00000638878 PLB1Q6P1J6 1458 aa15.79■□□□□ 0.12
PAX6-242ENST00000638878 ABCC10Q5T3U5 1492 aa15.77■□□□□ 0.11
PAX6-242ENST00000638878 ARHGAP35Q9NRY4 1499 aa15.73■□□□□ 0.11
PAX6-242ENST00000638878 FHOD3Q2V2M9 1422 aa15.73■□□□□ 0.11
PAX6-242ENST00000638878 FMN1Q68DA7 1419 aa15.73■□□□□ 0.11
PAX6-242ENST00000638878 ASXL2Q76L83 1435 aa15.73■□□□□ 0.11
PAX6-242ENST00000638878 RANGAP1P46060 587 aaPredicted RBP15.73■□□□□ 0.11
PAX6-242ENST00000638878 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
PAX6-242ENST00000638878 ATP10BO94823 1461 aa15.7■□□□□ 0.1
PAX6-242ENST00000638878 ZCCHC11Q5TAX3 1644 aaKnown RBP15.69■□□□□ 0.1
PAX6-242ENST00000638878 RAPGEF6Q8TEU7 1601 aa15.69■□□□□ 0.1
PAX6-242ENST00000638878 GLI2P10070 1586 aa15.67■□□□□ 0.1
PAX6-242ENST00000638878 DIP2BQ9P265 1576 aa15.67■□□□□ 0.1
PAX6-242ENST00000638878 NUP153P49790 1475 aaKnown RBP15.66■□□□□ 0.1
PAX6-242ENST00000638878 WDR7Q9Y4E6 1490 aa15.66■□□□□ 0.1
PAX6-242ENST00000638878 CLIP1P30622 1438 aa15.66■□□□□ 0.1
PAX6-242ENST00000638878 KIF13AQ9H1H9 1805 aa15.65■□□□□ 0.1
PAX6-242ENST00000638878 EPRSP07814 1512 aaKnown RBP15.64■□□□□ 0.1
PAX6-242ENST00000638878 LOC105371045A0A1W2PR82 267 aa15.62■□□□□ 0.09
PAX6-242ENST00000638878 PLEKHD1A6NEE1 506 aa15.62■□□□□ 0.09
PAX6-242ENST00000638878 CASKIN1Q8WXD9 1431 aa15.59■□□□□ 0.09
PAX6-242ENST00000638878 CDK11AQ9UQ88 783 aaPredicted RBP15.59■□□□□ 0.09
PAX6-242ENST00000638878 CEP162Q5TB80 1403 aa15.58■□□□□ 0.08
PAX6-242ENST00000638878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.57■□□□□ 0.08
PAX6-242ENST00000638878 HNRNPUL2Q1KMD3 747 aaKnown RBP15.57■□□□□ 0.08
PAX6-242ENST00000638878 HECW1Q76N89 1606 aa15.56■□□□□ 0.08
PAX6-242ENST00000638878 KCNH8Q96L42 1107 aa15.56■□□□□ 0.08
PAX6-242ENST00000638878 MAP3K4Q9Y6R4 1608 aa15.55■□□□□ 0.08
PAX6-242ENST00000638878 MAGI3Q5TCQ9 1506 aa15.54■□□□□ 0.08
PAX6-242ENST00000638878 FYCO1Q9BQS8 1478 aa15.53■□□□□ 0.08
PAX6-242ENST00000638878 ARID3CA6NKF2 412 aa15.53■□□□□ 0.08
PAX6-242ENST00000638878 CD109Q6YHK3 1445 aa15.53■□□□□ 0.08
PAX6-242ENST00000638878 CCDC18Q5T9S5 1454 aa15.52■□□□□ 0.07
PAX6-242ENST00000638878 TEX14Q8IWB6 1497 aa15.52■□□□□ 0.07
PAX6-242ENST00000638878 CFAP43Q8NDM7 1665 aa15.51■□□□□ 0.07
PAX6-242ENST00000638878 PHLDB1Q86UU1 1377 aa15.51■□□□□ 0.07
PAX6-242ENST00000638878 ATP1B4Q9UN42 357 aaPredicted RBP15.5■□□□□ 0.07
PAX6-242ENST00000638878 ABCA9Q8IUA7 1624 aa15.5■□□□□ 0.07
PAX6-242ENST00000638878 CDK13Q14004 1512 aaKnown RBP15.48■□□□□ 0.07
PAX6-242ENST00000638878 PCGF6Q9BYE7 350 aa15.47■□□□□ 0.07
PAX6-242ENST00000638878 PPRC1Q5VV67 1664 aaKnown RBP15.46■□□□□ 0.07
PAX6-242ENST00000638878 SENP3Q9H4L4 574 aaPredicted RBP15.46■□□□□ 0.07
PAX6-242ENST00000638878 TROQ12816 1431 aaPredicted RBP15.46■□□□□ 0.06
PAX6-242ENST00000638878 PCF11O94913 1555 aaKnown RBP15.45■□□□□ 0.06
PAX6-242ENST00000638878 VPS8Q8N3P4 1428 aa15.43■□□□□ 0.06
PAX6-242ENST00000638878 TSPOAP1O95153 1857 aa15.43■□□□□ 0.06
PAX6-242ENST00000638878 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.43■□□□□ 0.06
PAX6-242ENST00000638878 NEO1Q92859 1461 aa15.42■□□□□ 0.06
PAX6-242ENST00000638878 LRRIQ1Q96JM4 1722 aa15.42■□□□□ 0.06
PAX6-242ENST00000638878 KDM4FA0A1W2PPD8 638 aa15.42■□□□□ 0.06
PAX6-242ENST00000638878 ARAP3Q8WWN8 1544 aa15.41■□□□□ 0.06
PAX6-242ENST00000638878 PLCH2O75038 1416 aa15.41■□□□□ 0.06
PAX6-242ENST00000638878 KDM6BO15054 1643 aa15.39■□□□□ 0.05
PAX6-242ENST00000638878 COL17A1Q9UMD9 1497 aaPredicted RBP15.38■□□□□ 0.05
PAX6-242ENST00000638878 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
PAX6-242ENST00000638878 KIF14Q15058 1648 aa15.36■□□□□ 0.05
PAX6-242ENST00000638878 EFCAB2Q5VUJ9 269 aa15.36■□□□□ 0.05
PAX6-242ENST00000638878 ILDR1Q86SU0 546 aaPredicted RBP15.36■□□□□ 0.05
PAX6-242ENST00000638878 FANCAO15360 1455 aa15.34■□□□□ 0.05
PAX6-242ENST00000638878 TRIM26Q12899 539 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms