RNA–Protein interactions for RNA: ENST00000638843.1

SCARB2-214, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-214ENST00000638843 CLASP1Q7Z460 1538 aa16.28■□□□□ 0.2
SCARB2-214ENST00000638843 RIMBP3CA6NJZ7 1639 aa16.28■□□□□ 0.2
SCARB2-214ENST00000638843 RIMBP3BA6NNM3 1639 aa16.28■□□□□ 0.2
SCARB2-214ENST00000638843 RIMBP3Q9UFD9 1639 aa16.28■□□□□ 0.2
SCARB2-214ENST00000638843 CYB5RLQ6IPT4 315 aa16.26■□□□□ 0.19
SCARB2-214ENST00000638843 NUP160Q12769 1436 aa16.25■□□□□ 0.19
SCARB2-214ENST00000638843 CEP170Q5SW79 1584 aa16.21■□□□□ 0.18
SCARB2-214ENST00000638843 ARAP1Q96P48 1450 aa16.2■□□□□ 0.18
SCARB2-214ENST00000638843 CARMIL1Q5VZK9 1371 aa16.19■□□□□ 0.18
SCARB2-214ENST00000638843 RUSC2Q8N2Y8 1516 aa16.18■□□□□ 0.18
SCARB2-214ENST00000638843 SCAF1Q9H7N4 1312 aaKnown RBP16.16■□□□□ 0.18
SCARB2-214ENST00000638843 JPH4Q96JJ6 628 aa16.14■□□□□ 0.17
SCARB2-214ENST00000638843 CUL7Q14999 1698 aa16.1■□□□□ 0.17
SCARB2-214ENST00000638843 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
SCARB2-214ENST00000638843 PRG4Q92954 1404 aaPredicted RBP16.09■□□□□ 0.17
SCARB2-214ENST00000638843 KIAA0586Q9BVV6 1533 aa16.07■□□□□ 0.16
SCARB2-214ENST00000638843 SHROOM2Q13796 1616 aa16.06■□□□□ 0.16
SCARB2-214ENST00000638843 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
SCARB2-214ENST00000638843 CSRNP3Q8WYN3 585 aa16■□□□□ 0.15
SCARB2-214ENST00000638843 PRXQ9BXM0 1461 aa16■□□□□ 0.15
SCARB2-214ENST00000638843 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
SCARB2-214ENST00000638843 FAM9AQ8IZU1 332 aaPredicted RBP15.96■□□□□ 0.15
SCARB2-214ENST00000638843 TRHP20396 242 aaPredicted RBP15.93■□□□□ 0.14
SCARB2-214ENST00000638843 EEA1Q15075 1411 aa15.92■□□□□ 0.14
SCARB2-214ENST00000638843 IQGAP2Q13576 1575 aa15.92■□□□□ 0.14
SCARB2-214ENST00000638843 TTBK1Q5TCY1 1321 aaPredicted RBP15.91■□□□□ 0.14
SCARB2-214ENST00000638843 CARMIL2Q6F5E8 1435 aa15.9■□□□□ 0.14
SCARB2-214ENST00000638843 PTPRGP23470 1445 aa15.89■□□□□ 0.13
SCARB2-214ENST00000638843 DISP1Q96F81 1524 aa15.88■□□□□ 0.13
SCARB2-214ENST00000638843 TNIKQ9UKE5 1360 aa15.88■□□□□ 0.13
SCARB2-214ENST00000638843 UGGT2Q9NYU1 1516 aa15.86■□□□□ 0.13
SCARB2-214ENST00000638843 NPM1P06748 294 aaKnown RBP eCLIP15.81■□□□□ 0.12
SCARB2-214ENST00000638843 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
SCARB2-214ENST00000638843 ADCY10Q96PN6 1610 aa15.78■□□□□ 0.12
SCARB2-214ENST00000638843 KIAA0556O60303 1618 aa15.77■□□□□ 0.12
SCARB2-214ENST00000638843 P3H3Q8IVL6 736 aa15.76■□□□□ 0.11
SCARB2-214ENST00000638843 UACAQ9BZF9 1416 aa15.76■□□□□ 0.11
SCARB2-214ENST00000638843 GOLGA3Q08378 1498 aa15.76■□□□□ 0.11
SCARB2-214ENST00000638843 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
SCARB2-214ENST00000638843 CTTNBP2Q8WZ74 1663 aa15.74■□□□□ 0.11
SCARB2-214ENST00000638843 DCAF8L1A6NGE4 600 aa15.73■□□□□ 0.11
SCARB2-214ENST00000638843 UHRF1BP1LA0JNW5 1464 aa15.72■□□□□ 0.11
SCARB2-214ENST00000638843 ABCC2Q92887 1545 aa15.72■□□□□ 0.11
SCARB2-214ENST00000638843 KIF21BO75037 1637 aa15.71■□□□□ 0.11
SCARB2-214ENST00000638843 UBTFP17480 764 aaKnown RBP15.71■□□□□ 0.11
SCARB2-214ENST00000638843 FAM69CQ0P6D2 419 aa15.7■□□□□ 0.1
SCARB2-214ENST00000638843 PLB1Q6P1J6 1458 aa15.7■□□□□ 0.1
SCARB2-214ENST00000638843 MAPKBP1O60336 1514 aa15.7■□□□□ 0.1
SCARB2-214ENST00000638843 ABCC10Q5T3U5 1492 aa15.68■□□□□ 0.1
SCARB2-214ENST00000638843 KDM5BQ9UGL1 1544 aa15.66■□□□□ 0.1
SCARB2-214ENST00000638843 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
SCARB2-214ENST00000638843 SAMD9Q5K651 1589 aa15.64■□□□□ 0.09
SCARB2-214ENST00000638843 FHOD3Q2V2M9 1422 aa15.62■□□□□ 0.09
SCARB2-214ENST00000638843 ABCA8O94911 1581 aa15.62■□□□□ 0.09
SCARB2-214ENST00000638843 ARID3CA6NKF2 412 aa15.62■□□□□ 0.09
SCARB2-214ENST00000638843 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
SCARB2-214ENST00000638843 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
SCARB2-214ENST00000638843 DIP2BQ9P265 1576 aa15.59■□□□□ 0.09
SCARB2-214ENST00000638843 RNF39Q9H2S5 420 aa15.58■□□□□ 0.09
SCARB2-214ENST00000638843 ZCCHC11Q5TAX3 1644 aaKnown RBP15.56■□□□□ 0.08
SCARB2-214ENST00000638843 EFCAB5A4FU69 1503 aa15.55■□□□□ 0.08
SCARB2-214ENST00000638843 KIF13AQ9H1H9 1805 aa15.55■□□□□ 0.08
SCARB2-214ENST00000638843 ATP10BO94823 1461 aa15.55■□□□□ 0.08
SCARB2-214ENST00000638843 EPRSP07814 1512 aaKnown RBP15.55■□□□□ 0.08
SCARB2-214ENST00000638843 KCNH8Q96L42 1107 aa15.53■□□□□ 0.08
SCARB2-214ENST00000638843 ARHGAP35Q9NRY4 1499 aa15.53■□□□□ 0.08
SCARB2-214ENST00000638843 WDR7Q9Y4E6 1490 aa15.53■□□□□ 0.08
SCARB2-214ENST00000638843 NUP153P49790 1475 aaKnown RBP15.51■□□□□ 0.07
SCARB2-214ENST00000638843 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.51■□□□□ 0.07
SCARB2-214ENST00000638843 HNRNPUL2Q1KMD3 747 aaKnown RBP15.51■□□□□ 0.07
SCARB2-214ENST00000638843 GLI2P10070 1586 aa15.5■□□□□ 0.07
SCARB2-214ENST00000638843 RAPGEF6Q8TEU7 1601 aa15.49■□□□□ 0.07
SCARB2-214ENST00000638843 FMN1Q68DA7 1419 aa15.46■□□□□ 0.06
SCARB2-214ENST00000638843 ATP1B4Q9UN42 357 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-214ENST00000638843 LOC105371045A0A1W2PR82 267 aa15.44■□□□□ 0.06
SCARB2-214ENST00000638843 PLEKHD1A6NEE1 506 aa15.43■□□□□ 0.06
SCARB2-214ENST00000638843 CLIP1P30622 1438 aa15.43■□□□□ 0.06
SCARB2-214ENST00000638843 CD109Q6YHK3 1445 aa15.43■□□□□ 0.06
SCARB2-214ENST00000638843 MAP3K4Q9Y6R4 1608 aa15.4■□□□□ 0.06
SCARB2-214ENST00000638843 TSPOAP1O95153 1857 aa15.39■□□□□ 0.05
SCARB2-214ENST00000638843 CNKSR2Q8WXI2 1034 aa15.39■□□□□ 0.05
SCARB2-214ENST00000638843 COL17A1Q9UMD9 1497 aaPredicted RBP15.39■□□□□ 0.05
SCARB2-214ENST00000638843 CDK13Q14004 1512 aaKnown RBP15.38■□□□□ 0.05
SCARB2-214ENST00000638843 PPRC1Q5VV67 1664 aaKnown RBP15.38■□□□□ 0.05
SCARB2-214ENST00000638843 TEX14Q8IWB6 1497 aa15.37■□□□□ 0.05
SCARB2-214ENST00000638843 MAGI3Q5TCQ9 1506 aa15.36■□□□□ 0.05
SCARB2-214ENST00000638843 RNF216Q9NWF9 866 aaPredicted RBP15.36■□□□□ 0.05
SCARB2-214ENST00000638843 CASKIN1Q8WXD9 1431 aa15.35■□□□□ 0.05
SCARB2-214ENST00000638843 KDM6BO15054 1643 aa15.35■□□□□ 0.05
SCARB2-214ENST00000638843 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
SCARB2-214ENST00000638843 CDK11AQ9UQ88 783 aaPredicted RBP15.33■□□□□ 0.05
SCARB2-214ENST00000638843 HECW1Q76N89 1606 aa15.33■□□□□ 0.04
SCARB2-214ENST00000638843 CFAP43Q8NDM7 1665 aa15.31■□□□□ 0.04
SCARB2-214ENST00000638843 C1QBPQ07021 282 aaKnown RBP15.31■□□□□ 0.04
SCARB2-214ENST00000638843 ABCA9Q8IUA7 1624 aa15.31■□□□□ 0.04
SCARB2-214ENST00000638843 PCF11O94913 1555 aaKnown RBP15.28■□□□□ 0.04
SCARB2-214ENST00000638843 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCARB2-214ENST00000638843 FYCO1Q9BQS8 1478 aa15.27■□□□□ 0.03
SCARB2-214ENST00000638843 TROQ12816 1431 aaPredicted RBP15.27■□□□□ 0.03
SCARB2-214ENST00000638843 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms