RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 PBRM1Q86U86 1689 aa11.3□□□□□ -0.6
RTTN-213ENST00000638799 KANK4Q5T7N3 995 aaPredicted RBP11.3□□□□□ -0.6
RTTN-213ENST00000638799 IFT140Q96RY7 1462 aa11.29□□□□□ -0.6
RTTN-213ENST00000638799 CTTNBP2Q8WZ74 1663 aa11.29□□□□□ -0.6
RTTN-213ENST00000638799 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
RTTN-213ENST00000638799 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
RTTN-213ENST00000638799 ADAMTS12P58397 1594 aa11.24□□□□□ -0.61
RTTN-213ENST00000638799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
RTTN-213ENST00000638799 FHAD1B1AJZ9 1412 aa11.24□□□□□ -0.61
RTTN-213ENST00000638799 EIF4G3O43432 1585 aaKnown RBP11.23□□□□□ -0.61
RTTN-213ENST00000638799 EFCAB5A4FU69 1503 aa11.22□□□□□ -0.61
RTTN-213ENST00000638799 PCF11O94913 1555 aaKnown RBP11.21□□□□□ -0.61
RTTN-213ENST00000638799 HNRNPUL2Q1KMD3 747 aaKnown RBP11.2□□□□□ -0.62
RTTN-213ENST00000638799 SNAPC4Q5SXM2 1469 aa11.2□□□□□ -0.62
RTTN-213ENST00000638799 ATP1B4Q9UN42 357 aaPredicted RBP11.2□□□□□ -0.62
RTTN-213ENST00000638799 SAMD9Q5K651 1589 aa11.19□□□□□ -0.62
RTTN-213ENST00000638799 TIAM1Q13009 1591 aa11.19□□□□□ -0.62
RTTN-213ENST00000638799 CCER1Q8TC90 406 aaPredicted RBP11.16□□□□□ -0.62
RTTN-213ENST00000638799 ZEB1P37275 1124 aaPredicted RBP11.16□□□□□ -0.62
RTTN-213ENST00000638799 IQGAP2Q13576 1575 aa11.16□□□□□ -0.62
RTTN-213ENST00000638799 CASKIN1Q8WXD9 1431 aa11.16□□□□□ -0.62
RTTN-213ENST00000638799 MAP3K1Q13233 1512 aa11.15□□□□□ -0.62
RTTN-213ENST00000638799 LRRC9Q6ZRR7 1453 aa11.15□□□□□ -0.62
RTTN-213ENST00000638799 FYCO1Q9BQS8 1478 aa11.14□□□□□ -0.63
RTTN-213ENST00000638799 GRIN2AQ12879 1464 aa11.14□□□□□ -0.63
RTTN-213ENST00000638799 FMN1Q68DA7 1419 aa11.14□□□□□ -0.63
RTTN-213ENST00000638799 CFAP43Q8NDM7 1665 aa11.13□□□□□ -0.63
RTTN-213ENST00000638799 FBLN2P98095 1184 aa11.12□□□□□ -0.63
RTTN-213ENST00000638799 MAGI1Q96QZ7 1491 aaPredicted RBP11.12□□□□□ -0.63
RTTN-213ENST00000638799 RRBP1Q9P2E9 1410 aaKnown RBP11.12□□□□□ -0.63
RTTN-213ENST00000638799 MYT1Q01538 1121 aa11.12□□□□□ -0.63
RTTN-213ENST00000638799 CHMP7Q8WUX9 453 aaPredicted RBP11.11□□□□□ -0.63
RTTN-213ENST00000638799 LRRIQ1Q96JM4 1722 aa11.11□□□□□ -0.63
RTTN-213ENST00000638799 SYNJ2O15056 1496 aa11.1□□□□□ -0.63
RTTN-213ENST00000638799 KIAA0586Q9BVV6 1533 aa11.1□□□□□ -0.63
RTTN-213ENST00000638799 PHLDB1Q86UU1 1377 aa11.1□□□□□ -0.63
RTTN-213ENST00000638799 CEP170Q5SW79 1584 aa11.09□□□□□ -0.63
RTTN-213ENST00000638799 UGGT2Q9NYU1 1516 aa11.09□□□□□ -0.63
RTTN-213ENST00000638799 CCNB3Q8WWL7 1395 aa11.09□□□□□ -0.63
RTTN-213ENST00000638799 DISP1Q96F81 1524 aa11.07□□□□□ -0.64
RTTN-213ENST00000638799 ITGAEP38570 1179 aa11.06□□□□□ -0.64
RTTN-213ENST00000638799 KIAA0556O60303 1618 aa11.05□□□□□ -0.64
RTTN-213ENST00000638799 ARID3CA6NKF2 412 aa11.04□□□□□ -0.64
RTTN-213ENST00000638799 NUP160Q12769 1436 aa11.04□□□□□ -0.64
RTTN-213ENST00000638799 MTUS2Q5JR59 1369 aa11.03□□□□□ -0.64
RTTN-213ENST00000638799 MAGI3Q5TCQ9 1506 aa11.02□□□□□ -0.65
RTTN-213ENST00000638799 FAM50AQ14320 339 aaKnown RBP11.01□□□□□ -0.65
RTTN-213ENST00000638799 HECW1Q76N89 1606 aa11.01□□□□□ -0.65
RTTN-213ENST00000638799 CDK13Q14004 1512 aaKnown RBP11.01□□□□□ -0.65
RTTN-213ENST00000638799 EPRSP07814 1512 aaKnown RBP11□□□□□ -0.65
RTTN-213ENST00000638799 JPH4Q96JJ6 628 aa11□□□□□ -0.65
RTTN-213ENST00000638799 NCOA2Q15596 1464 aa10.98□□□□□ -0.65
RTTN-213ENST00000638799 CCDC18Q5T9S5 1454 aa10.98□□□□□ -0.65
RTTN-213ENST00000638799 EHBP1L1Q8N3D4 1523 aa10.97□□□□□ -0.65
RTTN-213ENST00000638799 CHD1O14646 1710 aa10.97□□□□□ -0.65
RTTN-213ENST00000638799 FGD6Q6ZV73 1430 aa10.97□□□□□ -0.65
RTTN-213ENST00000638799 NUP153P49790 1475 aaKnown RBP10.97□□□□□ -0.65
RTTN-213ENST00000638799 SUPT6HQ7KZ85 1726 aaKnown RBP10.96□□□□□ -0.66
RTTN-213ENST00000638799 DHX57Q6P158 1386 aaKnown RBP10.95□□□□□ -0.66
RTTN-213ENST00000638799 RAPGEF6Q8TEU7 1601 aa10.95□□□□□ -0.66
RTTN-213ENST00000638799 PLB1Q6P1J6 1458 aa10.95□□□□□ -0.66
RTTN-213ENST00000638799 CENPBP07199 599 aaPredicted RBP10.94□□□□□ -0.66
RTTN-213ENST00000638799 MYOM3Q5VTT5 1437 aa10.94□□□□□ -0.66
RTTN-213ENST00000638799 CARMIL2Q6F5E8 1435 aa10.94□□□□□ -0.66
RTTN-213ENST00000638799 ARHGEF11O15085 1522 aa10.94□□□□□ -0.66
RTTN-213ENST00000638799 RAB3GAP2Q9H2M9 1393 aa10.93□□□□□ -0.66
RTTN-213ENST00000638799 SCAF1Q9H7N4 1312 aaKnown RBP10.92□□□□□ -0.66
RTTN-213ENST00000638799 YTHDC1Q96MU7 727 aaKnown RBP10.92□□□□□ -0.66
RTTN-213ENST00000638799 PRG4Q92954 1404 aaPredicted RBP10.91□□□□□ -0.66
RTTN-213ENST00000638799 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.91□□□□□ -0.66
RTTN-213ENST00000638799 PTPRKQ15262 1439 aa10.91□□□□□ -0.66
RTTN-213ENST00000638799 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
RTTN-213ENST00000638799 SLC24A1O60721 1099 aa10.9□□□□□ -0.66
RTTN-213ENST00000638799 PTPN23Q9H3S7 1636 aa10.89□□□□□ -0.67
RTTN-213ENST00000638799 ABCA8O94911 1581 aa10.87□□□□□ -0.67
RTTN-213ENST00000638799 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
RTTN-213ENST00000638799 SHROOM2Q13796 1616 aa10.86□□□□□ -0.67
RTTN-213ENST00000638799 PTPRGP23470 1445 aa10.85□□□□□ -0.67
RTTN-213ENST00000638799 CDK11AQ9UQ88 783 aaPredicted RBP10.85□□□□□ -0.67
RTTN-213ENST00000638799 TCOF1Q13428 1488 aaKnown RBP10.85□□□□□ -0.67
RTTN-213ENST00000638799 CLSPNQ9HAW4 1339 aa10.84□□□□□ -0.67
RTTN-213ENST00000638799 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
RTTN-213ENST00000638799 TROQ12816 1431 aaPredicted RBP10.84□□□□□ -0.67
RTTN-213ENST00000638799 ATP10BO94823 1461 aa10.84□□□□□ -0.67
RTTN-213ENST00000638799 MAPKBP1O60336 1514 aa10.83□□□□□ -0.68
RTTN-213ENST00000638799 KIF14Q15058 1648 aa10.83□□□□□ -0.68
RTTN-213ENST00000638799 ZNF644Q9H582 1327 aaPredicted RBP10.83□□□□□ -0.68
RTTN-213ENST00000638799 CHIC2Q9UKJ5 165 aa10.83□□□□□ -0.68
RTTN-213ENST00000638799 MIA2Q96PC5 1412 aa10.83□□□□□ -0.68
RTTN-213ENST00000638799 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
RTTN-213ENST00000638799 CLASP1Q7Z460 1538 aa10.81□□□□□ -0.68
RTTN-213ENST00000638799 NAIPQ13075 1403 aa10.81□□□□□ -0.68
RTTN-213ENST00000638799 RRP7BPQ9NSQ0 103 aa10.8□□□□□ -0.68
RTTN-213ENST00000638799 PLEKHD1A6NEE1 506 aa10.79□□□□□ -0.68
RTTN-213ENST00000638799 ADCY10Q96PN6 1610 aa10.79□□□□□ -0.68
RTTN-213ENST00000638799 GPATCH8Q9UKJ3 1502 aaKnown RBP10.78□□□□□ -0.68
RTTN-213ENST00000638799 UACAQ9BZF9 1416 aa10.78□□□□□ -0.68
RTTN-213ENST00000638799 SIN3AQ96ST3 1273 aa10.77□□□□□ -0.69
RTTN-213ENST00000638799 CFDP1Q9UEE9 299 aaPredicted RBP10.77□□□□□ -0.69
RTTN-213ENST00000638799 ZNF777Q9ULD5 760 aaPredicted RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms