RNA–Protein interactions for RNA: ENST00000638709.1

FGFR2-227, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 5

Gene FGFR2, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-227ENST00000638709 EFCAB5A4FU69 1503 aa13.11□□□□□ -0.31
FGFR2-227ENST00000638709 URB2Q14146 1524 aaKnown RBP13.11□□□□□ -0.31
FGFR2-227ENST00000638709 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
FGFR2-227ENST00000638709 TIAM1Q13009 1591 aa13.1□□□□□ -0.31
FGFR2-227ENST00000638709 ABCA5Q8WWZ7 1642 aa13.09□□□□□ -0.31
FGFR2-227ENST00000638709 FHAD1B1AJZ9 1412 aa13.09□□□□□ -0.31
FGFR2-227ENST00000638709 CFAP43Q8NDM7 1665 aa13.09□□□□□ -0.31
FGFR2-227ENST00000638709 KIF21AQ7Z4S6 1674 aa13.08□□□□□ -0.32
FGFR2-227ENST00000638709 HNRNPUL2Q1KMD3 747 aaKnown RBP13.08□□□□□ -0.32
FGFR2-227ENST00000638709 MAPK8IP2Q13387 824 aaPredicted RBP13.06□□□□□ -0.32
FGFR2-227ENST00000638709 CLSPNQ9HAW4 1339 aa13.05□□□□□ -0.32
FGFR2-227ENST00000638709 KANK4Q5T7N3 995 aaPredicted RBP13.05□□□□□ -0.32
FGFR2-227ENST00000638709 AQRO60306 1485 aaKnown RBP eCLIP13.03□□□□□ -0.32
FGFR2-227ENST00000638709 FYCO1Q9BQS8 1478 aa13.03□□□□□ -0.32
FGFR2-227ENST00000638709 PCF11O94913 1555 aaKnown RBP13.03□□□□□ -0.32
FGFR2-227ENST00000638709 CCNB3Q8WWL7 1395 aa13.02□□□□□ -0.33
FGFR2-227ENST00000638709 GAPVD1Q14C86 1478 aa13.01□□□□□ -0.33
FGFR2-227ENST00000638709 LRRC9Q6ZRR7 1453 aa13.01□□□□□ -0.33
FGFR2-227ENST00000638709 TARBP1Q13395 1621 aaKnown RBP13.01□□□□□ -0.33
FGFR2-227ENST00000638709 CASKIN1Q8WXD9 1431 aa12.98□□□□□ -0.33
FGFR2-227ENST00000638709 SAMD9Q5K651 1589 aa12.98□□□□□ -0.33
FGFR2-227ENST00000638709 PBRM1Q86U86 1689 aa12.96□□□□□ -0.33
FGFR2-227ENST00000638709 FMN1Q68DA7 1419 aa12.96□□□□□ -0.33
FGFR2-227ENST00000638709 FHOD3Q2V2M9 1422 aa12.94□□□□□ -0.34
FGFR2-227ENST00000638709 THOC2Q8NI27 1593 aaKnown RBP12.94□□□□□ -0.34
FGFR2-227ENST00000638709 MRC2Q9UBG0 1479 aa12.94□□□□□ -0.34
FGFR2-227ENST00000638709 ZNF316A6NFI3 1004 aaPredicted RBP12.93□□□□□ -0.34
FGFR2-227ENST00000638709 DHX57Q6P158 1386 aaKnown RBP12.93□□□□□ -0.34
FGFR2-227ENST00000638709 DIEXFQ68CQ4 756 aaKnown RBP12.93□□□□□ -0.34
FGFR2-227ENST00000638709 TDRD9Q8NDG6 1382 aaKnown RBP12.93□□□□□ -0.34
FGFR2-227ENST00000638709 SNAPC4Q5SXM2 1469 aa12.91□□□□□ -0.34
FGFR2-227ENST00000638709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.9□□□□□ -0.34
FGFR2-227ENST00000638709 ADAMTS12P58397 1594 aa12.89□□□□□ -0.35
FGFR2-227ENST00000638709 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
FGFR2-227ENST00000638709 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
FGFR2-227ENST00000638709 WDR62O43379 1518 aa12.87□□□□□ -0.35
FGFR2-227ENST00000638709 GRIN2BQ13224 1484 aa12.85□□□□□ -0.35
FGFR2-227ENST00000638709 IFT140Q96RY7 1462 aa12.85□□□□□ -0.35
FGFR2-227ENST00000638709 IQGAP2Q13576 1575 aa12.85□□□□□ -0.35
FGFR2-227ENST00000638709 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
FGFR2-227ENST00000638709 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
FGFR2-227ENST00000638709 LRRIQ1Q96JM4 1722 aa12.84□□□□□ -0.35
FGFR2-227ENST00000638709 SETD5Q9C0A6 1442 aa12.84□□□□□ -0.35
FGFR2-227ENST00000638709 SCAF1Q9H7N4 1312 aaKnown RBP12.83□□□□□ -0.36
FGFR2-227ENST00000638709 RAB3GAP2Q9H2M9 1393 aa12.82□□□□□ -0.36
FGFR2-227ENST00000638709 CCDC18Q5T9S5 1454 aa12.82□□□□□ -0.36
FGFR2-227ENST00000638709 EHBP1L1Q8N3D4 1523 aa12.82□□□□□ -0.36
FGFR2-227ENST00000638709 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
FGFR2-227ENST00000638709 HECW1Q76N89 1606 aa12.8□□□□□ -0.36
FGFR2-227ENST00000638709 PPP4R3CPQ6ZMV5 832 aa12.8□□□□□ -0.36
FGFR2-227ENST00000638709 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
FGFR2-227ENST00000638709 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
FGFR2-227ENST00000638709 ATP1B4Q9UN42 357 aaPredicted RBP12.79□□□□□ -0.36
FGFR2-227ENST00000638709 UGGT2Q9NYU1 1516 aa12.79□□□□□ -0.36
FGFR2-227ENST00000638709 MAPKBP1O60336 1514 aa12.77□□□□□ -0.36
FGFR2-227ENST00000638709 ITGAEP38570 1179 aa12.76□□□□□ -0.37
FGFR2-227ENST00000638709 FAM50AQ14320 339 aaKnown RBP12.76□□□□□ -0.37
FGFR2-227ENST00000638709 ARHGEF11O15085 1522 aa12.75□□□□□ -0.37
FGFR2-227ENST00000638709 EIF4G3O43432 1585 aaKnown RBP12.75□□□□□ -0.37
FGFR2-227ENST00000638709 CENPBP07199 599 aaPredicted RBP12.75□□□□□ -0.37
FGFR2-227ENST00000638709 NCOA2Q15596 1464 aa12.75□□□□□ -0.37
FGFR2-227ENST00000638709 MYOM3Q5VTT5 1437 aa12.74□□□□□ -0.37
FGFR2-227ENST00000638709 KIAA0586Q9BVV6 1533 aa12.72□□□□□ -0.37
FGFR2-227ENST00000638709 ZNF608Q9ULD9 1512 aaPredicted RBP12.72□□□□□ -0.37
FGFR2-227ENST00000638709 PTPN23Q9H3S7 1636 aa12.71□□□□□ -0.37
FGFR2-227ENST00000638709 MAGI1Q96QZ7 1491 aaPredicted RBP12.71□□□□□ -0.38
FGFR2-227ENST00000638709 ACIN1Q9UKV3 1341 aaKnown RBP12.7□□□□□ -0.38
FGFR2-227ENST00000638709 ERCC6Q03468 1493 aa12.7□□□□□ -0.38
FGFR2-227ENST00000638709 GRIN2AQ12879 1464 aa12.7□□□□□ -0.38
FGFR2-227ENST00000638709 KIAA0556O60303 1618 aa12.7□□□□□ -0.38
FGFR2-227ENST00000638709 EPRSP07814 1512 aaKnown RBP12.7□□□□□ -0.38
FGFR2-227ENST00000638709 TIMELESSQ9UNS1 1208 aa12.7□□□□□ -0.38
FGFR2-227ENST00000638709 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
FGFR2-227ENST00000638709 TCOF1Q13428 1488 aaKnown RBP12.7□□□□□ -0.38
FGFR2-227ENST00000638709 MAGI3Q5TCQ9 1506 aa12.69□□□□□ -0.38
FGFR2-227ENST00000638709 GCC2Q8IWJ2 1684 aa12.66□□□□□ -0.38
FGFR2-227ENST00000638709 AKNAQ7Z591 1439 aa12.66□□□□□ -0.38
FGFR2-227ENST00000638709 MIA2Q96PC5 1412 aa12.66□□□□□ -0.38
FGFR2-227ENST00000638709 DISP1Q96F81 1524 aa12.66□□□□□ -0.38
FGFR2-227ENST00000638709 RAPGEF6Q8TEU7 1601 aa12.64□□□□□ -0.39
FGFR2-227ENST00000638709 UACAQ9BZF9 1416 aa12.64□□□□□ -0.39
FGFR2-227ENST00000638709 SYNJ2O15056 1496 aa12.64□□□□□ -0.39
FGFR2-227ENST00000638709 CDK13Q14004 1512 aaKnown RBP12.63□□□□□ -0.39
FGFR2-227ENST00000638709 NAIPQ13075 1403 aa12.62□□□□□ -0.39
FGFR2-227ENST00000638709 MIER1Q8N108 512 aa12.62□□□□□ -0.39
FGFR2-227ENST00000638709 PTPRKQ15262 1439 aa12.62□□□□□ -0.39
FGFR2-227ENST00000638709 NEUROD1Q13562 356 aa12.62□□□□□ -0.39
FGFR2-227ENST00000638709 CEP170Q5SW79 1584 aa12.6□□□□□ -0.39
FGFR2-227ENST00000638709 NUP153P49790 1475 aaKnown RBP12.59□□□□□ -0.39
FGFR2-227ENST00000638709 NUP160Q12769 1436 aa12.59□□□□□ -0.39
FGFR2-227ENST00000638709 ITSN2Q9NZM3 1697 aa12.56□□□□□ -0.4
FGFR2-227ENST00000638709 ADCY10Q96PN6 1610 aa12.56□□□□□ -0.4
FGFR2-227ENST00000638709 CARMIL2Q6F5E8 1435 aa12.56□□□□□ -0.4
FGFR2-227ENST00000638709 CDK11AQ9UQ88 783 aaPredicted RBP12.55□□□□□ -0.4
FGFR2-227ENST00000638709 DNMT1P26358 1616 aaKnown RBP12.55□□□□□ -0.4
FGFR2-227ENST00000638709 PELP1Q8IZL8 1130 aaKnown RBP12.54□□□□□ -0.4
FGFR2-227ENST00000638709 CHMP7Q8WUX9 453 aaPredicted RBP12.54□□□□□ -0.4
FGFR2-227ENST00000638709 ROCK1Q13464 1354 aa12.54□□□□□ -0.4
FGFR2-227ENST00000638709 SIN3AQ96ST3 1273 aa12.53□□□□□ -0.4
FGFR2-227ENST00000638709 TROQ12816 1431 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms