RNA–Protein interactions for RNA: ENST00000638281.1

GFAP-225, Transcript of glial fibrillary acidic protein, humanhuman

TSL 5 BASIC

Gene GFAP, Length 2,099 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-225ENST00000638281 CTTNBP2Q8WZ74 1663 aa24.16■■□□□ 1.46
GFAP-225ENST00000638281 GRIN2BQ13224 1484 aa24.16■■□□□ 1.46
GFAP-225ENST00000638281 ADAMTS12P58397 1594 aa24.12■■□□□ 1.45
GFAP-225ENST00000638281 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
GFAP-225ENST00000638281 APLP2Q06481 763 aa24.11■■□□□ 1.45
GFAP-225ENST00000638281 EIF4G3O43432 1585 aaKnown RBP24.1■■□□□ 1.45
GFAP-225ENST00000638281 P3H3Q8IVL6 736 aa24.04■■□□□ 1.44
GFAP-225ENST00000638281 EFCAB5A4FU69 1503 aa24.03■■□□□ 1.44
GFAP-225ENST00000638281 SNAPC4Q5SXM2 1469 aa24.01■■□□□ 1.43
GFAP-225ENST00000638281 FHOD3Q2V2M9 1422 aa24■■□□□ 1.43
GFAP-225ENST00000638281 KANK4Q5T7N3 995 aaPredicted RBP23.96■■□□□ 1.43
GFAP-225ENST00000638281 SAMD9Q5K651 1589 aa23.95■■□□□ 1.42
GFAP-225ENST00000638281 MAGI1Q96QZ7 1491 aaPredicted RBP23.91■■□□□ 1.42
GFAP-225ENST00000638281 PCF11O94913 1555 aaKnown RBP23.91■■□□□ 1.42
GFAP-225ENST00000638281 IQGAP2Q13576 1575 aa23.9■■□□□ 1.42
GFAP-225ENST00000638281 GRIN2AQ12879 1464 aa23.89■■□□□ 1.42
GFAP-225ENST00000638281 TIAM1Q13009 1591 aa23.87■■□□□ 1.41
GFAP-225ENST00000638281 MAP3K1Q13233 1512 aa23.86■■□□□ 1.41
GFAP-225ENST00000638281 SYNJ2O15056 1496 aa23.84■■□□□ 1.41
GFAP-225ENST00000638281 FMN1Q68DA7 1419 aa23.83■■□□□ 1.41
GFAP-225ENST00000638281 CASKIN1Q8WXD9 1431 aa23.83■■□□□ 1.41
GFAP-225ENST00000638281 FYCO1Q9BQS8 1478 aa23.83■■□□□ 1.4
GFAP-225ENST00000638281 KIAA0586Q9BVV6 1533 aa23.81■■□□□ 1.4
GFAP-225ENST00000638281 CHMP7Q8WUX9 453 aaPredicted RBP23.8■■□□□ 1.4
GFAP-225ENST00000638281 ATP1B4Q9UN42 357 aaPredicted RBP23.78■■□□□ 1.4
GFAP-225ENST00000638281 CFAP43Q8NDM7 1665 aa23.78■■□□□ 1.4
GFAP-225ENST00000638281 UGGT2Q9NYU1 1516 aa23.78■■□□□ 1.4
GFAP-225ENST00000638281 LRRC9Q6ZRR7 1453 aa23.76■■□□□ 1.39
GFAP-225ENST00000638281 FBLN2P98095 1184 aa23.75■■□□□ 1.39
GFAP-225ENST00000638281 CEP170Q5SW79 1584 aa23.75■■□□□ 1.39
GFAP-225ENST00000638281 NUP160Q12769 1436 aa23.7■■□□□ 1.38
GFAP-225ENST00000638281 HNRNPUL2Q1KMD3 747 aaKnown RBP23.69■■□□□ 1.38
GFAP-225ENST00000638281 DISP1Q96F81 1524 aa23.68■■□□□ 1.38
GFAP-225ENST00000638281 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.68■■□□□ 1.38
GFAP-225ENST00000638281 RRBP1Q9P2E9 1410 aaKnown RBP23.68■■□□□ 1.38
GFAP-225ENST00000638281 LRRIQ1Q96JM4 1722 aa23.67■■□□□ 1.38
GFAP-225ENST00000638281 KIAA0556O60303 1618 aa23.65■■□□□ 1.38
GFAP-225ENST00000638281 CCER1Q8TC90 406 aaPredicted RBP23.65■■□□□ 1.38
GFAP-225ENST00000638281 PHLDB1Q86UU1 1377 aa23.59■■□□□ 1.37
GFAP-225ENST00000638281 CCNB3Q8WWL7 1395 aa23.59■■□□□ 1.37
GFAP-225ENST00000638281 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
GFAP-225ENST00000638281 JPH4Q96JJ6 628 aa23.55■■□□□ 1.36
GFAP-225ENST00000638281 CHD1O14646 1710 aa23.54■■□□□ 1.36
GFAP-225ENST00000638281 CCDC18Q5T9S5 1454 aa23.52■■□□□ 1.36
GFAP-225ENST00000638281 MTUS2Q5JR59 1369 aa23.52■■□□□ 1.36
GFAP-225ENST00000638281 EPRSP07814 1512 aaKnown RBP23.51■■□□□ 1.35
GFAP-225ENST00000638281 MAGI3Q5TCQ9 1506 aa23.49■■□□□ 1.35
GFAP-225ENST00000638281 CARMIL2Q6F5E8 1435 aa23.48■■□□□ 1.35
GFAP-225ENST00000638281 CDK13Q14004 1512 aaKnown RBP23.47■■□□□ 1.35
GFAP-225ENST00000638281 EHBP1L1Q8N3D4 1523 aa23.46■■□□□ 1.35
GFAP-225ENST00000638281 RAPGEF6Q8TEU7 1601 aa23.45■■□□□ 1.34
GFAP-225ENST00000638281 ARID3CA6NKF2 412 aa23.44■■□□□ 1.34
GFAP-225ENST00000638281 NUP153P49790 1475 aaKnown RBP23.44■■□□□ 1.34
GFAP-225ENST00000638281 NCOA2Q15596 1464 aa23.42■■□□□ 1.34
GFAP-225ENST00000638281 ITGAEP38570 1179 aa23.41■■□□□ 1.34
GFAP-225ENST00000638281 SUPT6HQ7KZ85 1726 aaKnown RBP23.41■■□□□ 1.34
GFAP-225ENST00000638281 PELP1Q8IZL8 1130 aaKnown RBP23.4■■□□□ 1.34
GFAP-225ENST00000638281 PLB1Q6P1J6 1458 aa23.4■■□□□ 1.34
GFAP-225ENST00000638281 FAM50AQ14320 339 aaKnown RBP23.39■■□□□ 1.33
GFAP-225ENST00000638281 SCAF1Q9H7N4 1312 aaKnown RBP23.38■■□□□ 1.33
GFAP-225ENST00000638281 PRG4Q92954 1404 aaPredicted RBP23.38■■□□□ 1.33
GFAP-225ENST00000638281 FGD6Q6ZV73 1430 aa23.38■■□□□ 1.33
GFAP-225ENST00000638281 ARHGEF11O15085 1522 aa23.37■■□□□ 1.33
GFAP-225ENST00000638281 MYOM3Q5VTT5 1437 aa23.34■■□□□ 1.33
GFAP-225ENST00000638281 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.33■■□□□ 1.33
GFAP-225ENST00000638281 SHROOM2Q13796 1616 aa23.33■■□□□ 1.33
GFAP-225ENST00000638281 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
GFAP-225ENST00000638281 ABCA8O94911 1581 aa23.29■■□□□ 1.32
GFAP-225ENST00000638281 CLASP1Q7Z460 1538 aa23.25■■□□□ 1.31
GFAP-225ENST00000638281 PTPRGP23470 1445 aa23.25■■□□□ 1.31
GFAP-225ENST00000638281 ACIN1Q9UKV3 1341 aaKnown RBP23.24■■□□□ 1.31
GFAP-225ENST00000638281 ERCC6L2Q5T890 1561 aa23.23■■□□□ 1.31
GFAP-225ENST00000638281 CDK11AQ9UQ88 783 aaPredicted RBP23.23■■□□□ 1.31
GFAP-225ENST00000638281 PTPN23Q9H3S7 1636 aa23.22■■□□□ 1.31
GFAP-225ENST00000638281 DHX57Q6P158 1386 aaKnown RBP23.22■■□□□ 1.31
GFAP-225ENST00000638281 RAB3GAP2Q9H2M9 1393 aa23.21■■□□□ 1.31
GFAP-225ENST00000638281 TROQ12816 1431 aaPredicted RBP23.2■■□□□ 1.3
GFAP-225ENST00000638281 SETD5Q9C0A6 1442 aa23.19■■□□□ 1.3
GFAP-225ENST00000638281 ATP10BO94823 1461 aa23.18■■□□□ 1.3
GFAP-225ENST00000638281 PTPRKQ15262 1439 aa23.18■■□□□ 1.3
GFAP-225ENST00000638281 TCOF1Q13428 1488 aaKnown RBP23.17■■□□□ 1.3
GFAP-225ENST00000638281 CENPBP07199 599 aaPredicted RBP23.17■■□□□ 1.3
GFAP-225ENST00000638281 MIA2Q96PC5 1412 aa23.16■■□□□ 1.3
GFAP-225ENST00000638281 ZNF316A6NFI3 1004 aaPredicted RBP23.15■■□□□ 1.3
GFAP-225ENST00000638281 KIF14Q15058 1648 aa23.12■■□□□ 1.29
GFAP-225ENST00000638281 UACAQ9BZF9 1416 aa23.11■■□□□ 1.29
GFAP-225ENST00000638281 ADCY10Q96PN6 1610 aa23.11■■□□□ 1.29
GFAP-225ENST00000638281 NEUROD1Q13562 356 aa23.09■■□□□ 1.29
GFAP-225ENST00000638281 CLSPNQ9HAW4 1339 aa23.08■■□□□ 1.29
GFAP-225ENST00000638281 PLEKHD1A6NEE1 506 aa23.08■■□□□ 1.29
GFAP-225ENST00000638281 HFM1A2PYH4 1435 aa23.05■■□□□ 1.28
GFAP-225ENST00000638281 GPATCH8Q9UKJ3 1502 aaKnown RBP23.04■■□□□ 1.28
GFAP-225ENST00000638281 ABCC2Q92887 1545 aa23.03■■□□□ 1.28
GFAP-225ENST00000638281 ZNF644Q9H582 1327 aaPredicted RBP23.03■■□□□ 1.28
GFAP-225ENST00000638281 NAIPQ13075 1403 aa23.01■■□□□ 1.27
GFAP-225ENST00000638281 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
GFAP-225ENST00000638281 ITSN2Q9NZM3 1697 aa23■■□□□ 1.27
GFAP-225ENST00000638281 MAPKBP1O60336 1514 aa22.98■■□□□ 1.27
GFAP-225ENST00000638281 CHIC2Q9UKJ5 165 aa22.98■■□□□ 1.27
GFAP-225ENST00000638281 CFDP1Q9UEE9 299 aaPredicted RBP22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms