RNA–Protein interactions for RNA: ENST00000637789.1

CHD2-229, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-229ENST00000637789 GRIN2AQ12879 1464 aa19■□□□□ 0.63
CHD2-229ENST00000637789 NUP160Q12769 1436 aa18.99■□□□□ 0.63
CHD2-229ENST00000637789 NPM1P06748 294 aaKnown RBP eCLIP18.98■□□□□ 0.63
CHD2-229ENST00000637789 PRG4Q92954 1404 aaPredicted RBP18.91■□□□□ 0.62
CHD2-229ENST00000637789 CUX1P39880 1505 aa18.9■□□□□ 0.62
CHD2-229ENST00000637789 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.62
CHD2-229ENST00000637789 ADCY10Q96PN6 1610 aa18.86■□□□□ 0.61
CHD2-229ENST00000637789 DISP3Q9P2K9 1392 aa18.85■□□□□ 0.61
CHD2-229ENST00000637789 ADAMTS12P58397 1594 aa18.84■□□□□ 0.61
CHD2-229ENST00000637789 ABCA10Q8WWZ4 1543 aa18.8■□□□□ 0.6
CHD2-229ENST00000637789 PPRC1Q5VV67 1664 aaKnown RBP18.79■□□□□ 0.6
CHD2-229ENST00000637789 JPH4Q96JJ6 628 aa18.78■□□□□ 0.6
CHD2-229ENST00000637789 COL17A1Q9UMD9 1497 aaPredicted RBP18.77■□□□□ 0.6
CHD2-229ENST00000637789 TOP2BQ02880 1626 aa18.74■□□□□ 0.59
CHD2-229ENST00000637789 FHAD1B1AJZ9 1412 aa18.72■□□□□ 0.59
CHD2-229ENST00000637789 GLI2P10070 1586 aa18.65■□□□□ 0.58
CHD2-229ENST00000637789 RUSC2Q8N2Y8 1516 aa18.61■□□□□ 0.57
CHD2-229ENST00000637789 SPATA31D1Q6ZQQ2 1576 aa18.58■□□□□ 0.56
CHD2-229ENST00000637789 ASXL2Q76L83 1435 aa18.57■□□□□ 0.56
CHD2-229ENST00000637789 PLB1Q6P1J6 1458 aa18.55■□□□□ 0.56
CHD2-229ENST00000637789 CERKQ8TCT0 537 aa18.55■□□□□ 0.56
CHD2-229ENST00000637789 ERICH3Q5RHP9 1530 aa18.53■□□□□ 0.56
CHD2-229ENST00000637789 TEX14Q8IWB6 1497 aa18.52■□□□□ 0.56
CHD2-229ENST00000637789 MAP3K4Q9Y6R4 1608 aa18.52■□□□□ 0.55
CHD2-229ENST00000637789 ABCC2Q92887 1545 aa18.5■□□□□ 0.55
CHD2-229ENST00000637789 PCF11O94913 1555 aaKnown RBP18.5■□□□□ 0.55
CHD2-229ENST00000637789 PTPRMP28827 1452 aa18.49■□□□□ 0.55
CHD2-229ENST00000637789 KIF21BO75037 1637 aa18.48■□□□□ 0.55
CHD2-229ENST00000637789 WRNQ14191 1432 aaPredicted RBP eCLIP18.48■□□□□ 0.55
CHD2-229ENST00000637789 EPRSP07814 1512 aaKnown RBP18.45■□□□□ 0.54
CHD2-229ENST00000637789 PTPRGP23470 1445 aa18.44■□□□□ 0.54
CHD2-229ENST00000637789 CUL7Q14999 1698 aa18.44■□□□□ 0.54
CHD2-229ENST00000637789 TTBK1Q5TCY1 1321 aaPredicted RBP18.42■□□□□ 0.54
CHD2-229ENST00000637789 ADAMTSL3P82987 1691 aa18.39■□□□□ 0.53
CHD2-229ENST00000637789 KIAA0586Q9BVV6 1533 aa18.37■□□□□ 0.53
CHD2-229ENST00000637789 HSPA2P54652 639 aa18.35■□□□□ 0.53
CHD2-229ENST00000637789 UHRF1BP1LA0JNW5 1464 aa18.32■□□□□ 0.52
CHD2-229ENST00000637789 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
CHD2-229ENST00000637789 KDM5BQ9UGL1 1544 aa18.26■□□□□ 0.51
CHD2-229ENST00000637789 MADDQ8WXG6 1647 aa18.26■□□□□ 0.51
CHD2-229ENST00000637789 BIVM-ERCC5R4GMW8 1640 aa18.26■□□□□ 0.51
CHD2-229ENST00000637789 UACAQ9BZF9 1416 aa18.25■□□□□ 0.51
CHD2-229ENST00000637789 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
CHD2-229ENST00000637789 ZCCHC11Q5TAX3 1644 aaKnown RBP18.23■□□□□ 0.51
CHD2-229ENST00000637789 BCORL1Q5H9F3 1711 aa18.21■□□□□ 0.51
CHD2-229ENST00000637789 CARMIL2Q6F5E8 1435 aa18.21■□□□□ 0.51
CHD2-229ENST00000637789 CD109Q6YHK3 1445 aa18.21■□□□□ 0.51
CHD2-229ENST00000637789 WDR7Q9Y4E6 1490 aa18.18■□□□□ 0.5
CHD2-229ENST00000637789 CFAP43Q8NDM7 1665 aa18.17■□□□□ 0.5
CHD2-229ENST00000637789 RIMS1Q86UR5 1692 aaKnown RBP18.15■□□□□ 0.5
CHD2-229ENST00000637789 ARAP3Q8WWN8 1544 aa18.13■□□□□ 0.49
CHD2-229ENST00000637789 ARID4BQ4LE39 1312 aaPredicted RBP18.12■□□□□ 0.49
CHD2-229ENST00000637789 PLPPR3Q6T4P5 718 aa18.11■□□□□ 0.49
CHD2-229ENST00000637789 KCNH8Q96L42 1107 aa18.07■□□□□ 0.48
CHD2-229ENST00000637789 DISP1Q96F81 1524 aa18.05■□□□□ 0.48
CHD2-229ENST00000637789 IGF1RP08069 1367 aa18.03■□□□□ 0.48
CHD2-229ENST00000637789 IQGAP2Q13576 1575 aa18.01■□□□□ 0.47
CHD2-229ENST00000637789 RAPGEF3O95398 923 aa18.01■□□□□ 0.47
CHD2-229ENST00000637789 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
CHD2-229ENST00000637789 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
CHD2-229ENST00000637789 STRCQ7RTU9 1775 aa17.98■□□□□ 0.47
CHD2-229ENST00000637789 FRMPD1Q5SYB0 1578 aa17.94■□□□□ 0.46
CHD2-229ENST00000637789 IQSEC2Q5JU85 1478 aa17.94■□□□□ 0.46
CHD2-229ENST00000637789 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
CHD2-229ENST00000637789 PHLDB1Q86UU1 1377 aa17.92■□□□□ 0.46
CHD2-229ENST00000637789 PREX1Q8TCU6 1659 aa17.9■□□□□ 0.46
CHD2-229ENST00000637789 ARHGEF40Q8TER5 1519 aa17.9■□□□□ 0.46
CHD2-229ENST00000637789 MED1Q15648 1581 aaPredicted RBP17.88■□□□□ 0.45
CHD2-229ENST00000637789 KIAA0556O60303 1618 aa17.88■□□□□ 0.45
CHD2-229ENST00000637789 CARMIL1Q5VZK9 1371 aa17.87■□□□□ 0.45
CHD2-229ENST00000637789 TTC37Q6PGP7 1564 aa17.87■□□□□ 0.45
CHD2-229ENST00000637789 PTPRTO14522 1441 aa17.86■□□□□ 0.45
CHD2-229ENST00000637789 POGZQ7Z3K3 1410 aa17.86■□□□□ 0.45
CHD2-229ENST00000637789 UGGT2Q9NYU1 1516 aa17.86■□□□□ 0.45
CHD2-229ENST00000637789 KIF27Q86VH2 1401 aa17.84■□□□□ 0.45
CHD2-229ENST00000637789 FER1L4A9Z1Z3 1794 aa17.84■□□□□ 0.45
CHD2-229ENST00000637789 SIGLEC1Q9BZZ2 1709 aa17.84■□□□□ 0.45
CHD2-229ENST00000637789 FANCAO15360 1455 aa17.83■□□□□ 0.45
CHD2-229ENST00000637789 NEO1Q92859 1461 aa17.83■□□□□ 0.45
CHD2-229ENST00000637789 ABCA9Q8IUA7 1624 aa17.81■□□□□ 0.44
CHD2-229ENST00000637789 UBAP1LF5GYI3 381 aa17.81■□□□□ 0.44
CHD2-229ENST00000637789 MLECQ14165 292 aa17.81■□□□□ 0.44
CHD2-229ENST00000637789 ABCA8O94911 1581 aa17.8■□□□□ 0.44
CHD2-229ENST00000637789 AKNAQ7Z591 1439 aa17.76■□□□□ 0.43
CHD2-229ENST00000637789 CEBPAP49715 358 aaPredicted RBP17.76■□□□□ 0.43
CHD2-229ENST00000637789 UHRF1BP1Q6BDS2 1440 aa17.75■□□□□ 0.43
CHD2-229ENST00000637789 RICTORQ6R327 1708 aa17.74■□□□□ 0.43
CHD2-229ENST00000637789 PHF23Q9BUL5 403 aaPredicted RBP17.72■□□□□ 0.43
CHD2-229ENST00000637789 DENND4BO75064 1496 aaPredicted RBP17.71■□□□□ 0.43
CHD2-229ENST00000637789 HSPA1LP34931 641 aa17.7■□□□□ 0.42
CHD2-229ENST00000637789 ARHGEF12Q9NZN5 1544 aa17.7■□□□□ 0.42
CHD2-229ENST00000637789 ARID3CA6NKF2 412 aa17.69■□□□□ 0.42
CHD2-229ENST00000637789 FHOD3Q2V2M9 1422 aa17.69■□□□□ 0.42
CHD2-229ENST00000637789 ZFYVE16Q7Z3T8 1539 aa17.68■□□□□ 0.42
CHD2-229ENST00000637789 EFCAB5A4FU69 1503 aa17.67■□□□□ 0.42
CHD2-229ENST00000637789 ZMYM4Q5VZL5 1548 aa17.66■□□□□ 0.42
CHD2-229ENST00000637789 ATP10BO94823 1461 aa17.64■□□□□ 0.41
CHD2-229ENST00000637789 ZNF335Q9H4Z2 1342 aaPredicted RBP17.63■□□□□ 0.41
CHD2-229ENST00000637789 SETD1BQ9UPS6 1966 aaKnown RBP17.62■□□□□ 0.41
CHD2-229ENST00000637789 NCOA1Q15788 1441 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms