RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 PRG4Q92954 1404 aaPredicted RBP24.21■■□□□ 1.47
CACNA1A-249ENST00000637777 JPH4Q96JJ6 628 aa24.21■■□□□ 1.47
CACNA1A-249ENST00000637777 RAPGEF2Q9Y4G8 1499 aa24.19■■□□□ 1.46
CACNA1A-249ENST00000637777 KIAA0586Q9BVV6 1533 aa24.19■■□□□ 1.46
CACNA1A-249ENST00000637777 IQGAP2Q13576 1575 aa24.1■■□□□ 1.45
CACNA1A-249ENST00000637777 FAM9AQ8IZU1 332 aaPredicted RBP24.07■■□□□ 1.44
CACNA1A-249ENST00000637777 CHIC1Q5VXU3 224 aa24.06■■□□□ 1.44
CACNA1A-249ENST00000637777 TRHP20396 242 aaPredicted RBP24.05■■□□□ 1.44
CACNA1A-249ENST00000637777 TTBK1Q5TCY1 1321 aaPredicted RBP24.05■■□□□ 1.44
CACNA1A-249ENST00000637777 EEA1Q15075 1411 aa24.03■■□□□ 1.44
CACNA1A-249ENST00000637777 CTTNBP2Q8WZ74 1663 aa24.03■■□□□ 1.44
CACNA1A-249ENST00000637777 CSRNP3Q8WYN3 585 aa24.02■■□□□ 1.44
CACNA1A-249ENST00000637777 CARMIL2Q6F5E8 1435 aa24.01■■□□□ 1.43
CACNA1A-249ENST00000637777 PRXQ9BXM0 1461 aa24■■□□□ 1.43
CACNA1A-249ENST00000637777 PTPRGP23470 1445 aa23.91■■□□□ 1.42
CACNA1A-249ENST00000637777 TNIKQ9UKE5 1360 aa23.9■■□□□ 1.42
CACNA1A-249ENST00000637777 UGGT2Q9NYU1 1516 aa23.89■■□□□ 1.42
CACNA1A-249ENST00000637777 NPM1P06748 294 aaKnown RBP eCLIP23.89■■□□□ 1.41
CACNA1A-249ENST00000637777 DISP1Q96F81 1524 aa23.86■■□□□ 1.41
CACNA1A-249ENST00000637777 KIAA0556O60303 1618 aa23.86■■□□□ 1.41
CACNA1A-249ENST00000637777 EHMT2Q96KQ7 1210 aa23.85■■□□□ 1.41
CACNA1A-249ENST00000637777 ADCY10Q96PN6 1610 aa23.84■■□□□ 1.41
CACNA1A-249ENST00000637777 GOLGA3Q08378 1498 aa23.82■■□□□ 1.4
CACNA1A-249ENST00000637777 KIF21BO75037 1637 aa23.8■■□□□ 1.4
CACNA1A-249ENST00000637777 RANGAP1P46060 587 aaPredicted RBP23.79■■□□□ 1.4
CACNA1A-249ENST00000637777 P3H3Q8IVL6 736 aa23.73■■□□□ 1.39
CACNA1A-249ENST00000637777 UBTFP17480 764 aaKnown RBP23.72■■□□□ 1.39
CACNA1A-249ENST00000637777 UACAQ9BZF9 1416 aa23.72■■□□□ 1.39
CACNA1A-249ENST00000637777 ABCC2Q92887 1545 aa23.69■■□□□ 1.38
CACNA1A-249ENST00000637777 MAPKBP1O60336 1514 aa23.68■■□□□ 1.38
CACNA1A-249ENST00000637777 UHRF1BP1LA0JNW5 1464 aa23.65■■□□□ 1.38
CACNA1A-249ENST00000637777 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
CACNA1A-249ENST00000637777 SAMD9Q5K651 1589 aa23.63■■□□□ 1.37
CACNA1A-249ENST00000637777 PLB1Q6P1J6 1458 aa23.62■■□□□ 1.37
CACNA1A-249ENST00000637777 FAM69CQ0P6D2 419 aa23.62■■□□□ 1.37
CACNA1A-249ENST00000637777 ZCCHC11Q5TAX3 1644 aaKnown RBP23.59■■□□□ 1.37
CACNA1A-249ENST00000637777 ABCC10Q5T3U5 1492 aa23.58■■□□□ 1.37
CACNA1A-249ENST00000637777 DIP2BQ9P265 1576 aa23.57■■□□□ 1.36
CACNA1A-249ENST00000637777 FHOD3Q2V2M9 1422 aa23.56■■□□□ 1.36
CACNA1A-249ENST00000637777 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
CACNA1A-249ENST00000637777 ABCA8O94911 1581 aa23.56■■□□□ 1.36
CACNA1A-249ENST00000637777 KDM5BQ9UGL1 1544 aa23.55■■□□□ 1.36
CACNA1A-249ENST00000637777 EFCAB5A4FU69 1503 aa23.54■■□□□ 1.36
CACNA1A-249ENST00000637777 ARID3CA6NKF2 412 aa23.54■■□□□ 1.36
CACNA1A-249ENST00000637777 TSPOAP1O95153 1857 aa23.51■■□□□ 1.35
CACNA1A-249ENST00000637777 RAPGEF6Q8TEU7 1601 aa23.49■■□□□ 1.35
CACNA1A-249ENST00000637777 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
CACNA1A-249ENST00000637777 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
CACNA1A-249ENST00000637777 WDR7Q9Y4E6 1490 aa23.43■■□□□ 1.34
CACNA1A-249ENST00000637777 EPRSP07814 1512 aaKnown RBP23.4■■□□□ 1.34
CACNA1A-249ENST00000637777 KCNH8Q96L42 1107 aa23.39■■□□□ 1.33
CACNA1A-249ENST00000637777 ATP1B4Q9UN42 357 aaPredicted RBP23.38■■□□□ 1.33
CACNA1A-249ENST00000637777 GLI2P10070 1586 aa23.38■■□□□ 1.33
CACNA1A-249ENST00000637777 ARHGAP35Q9NRY4 1499 aa23.37■■□□□ 1.33
CACNA1A-249ENST00000637777 ATP10BO94823 1461 aa23.36■■□□□ 1.33
CACNA1A-249ENST00000637777 NUP153P49790 1475 aaKnown RBP23.34■■□□□ 1.33
CACNA1A-249ENST00000637777 FMN1Q68DA7 1419 aa23.33■■□□□ 1.33
CACNA1A-249ENST00000637777 MAP3K4Q9Y6R4 1608 aa23.3■■□□□ 1.32
CACNA1A-249ENST00000637777 KDM6BO15054 1643 aa23.3■■□□□ 1.32
CACNA1A-249ENST00000637777 HECW1Q76N89 1606 aa23.28■■□□□ 1.32
CACNA1A-249ENST00000637777 CLIP1P30622 1438 aa23.26■■□□□ 1.31
CACNA1A-249ENST00000637777 PPRC1Q5VV67 1664 aaKnown RBP23.26■■□□□ 1.31
CACNA1A-249ENST00000637777 CFAP43Q8NDM7 1665 aa23.26■■□□□ 1.31
CACNA1A-249ENST00000637777 TEX14Q8IWB6 1497 aa23.26■■□□□ 1.31
CACNA1A-249ENST00000637777 CD109Q6YHK3 1445 aa23.24■■□□□ 1.31
CACNA1A-249ENST00000637777 PLEKHD1A6NEE1 506 aa23.23■■□□□ 1.31
CACNA1A-249ENST00000637777 CDK13Q14004 1512 aaKnown RBP23.23■■□□□ 1.31
CACNA1A-249ENST00000637777 PCF11O94913 1555 aaKnown RBP23.17■■□□□ 1.3
CACNA1A-249ENST00000637777 ABCA9Q8IUA7 1624 aa23.15■■□□□ 1.3
CACNA1A-249ENST00000637777 MAGI3Q5TCQ9 1506 aa23.13■■□□□ 1.29
CACNA1A-249ENST00000637777 LOC105371045A0A1W2PR82 267 aa23.13■■□□□ 1.29
CACNA1A-249ENST00000637777 CDK11AQ9UQ88 783 aaPredicted RBP23.13■■□□□ 1.29
CACNA1A-249ENST00000637777 CEP162Q5TB80 1403 aa23.13■■□□□ 1.29
CACNA1A-249ENST00000637777 CASKIN1Q8WXD9 1431 aa23.1■■□□□ 1.29
CACNA1A-249ENST00000637777 LRRIQ1Q96JM4 1722 aa23.09■■□□□ 1.29
CACNA1A-249ENST00000637777 CCDC18Q5T9S5 1454 aa23.08■■□□□ 1.29
CACNA1A-249ENST00000637777 FYCO1Q9BQS8 1478 aa23.08■■□□□ 1.29
CACNA1A-249ENST00000637777 TTC37Q6PGP7 1564 aa23.04■■□□□ 1.28
CACNA1A-249ENST00000637777 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.03■■□□□ 1.28
CACNA1A-249ENST00000637777 KIF14Q15058 1648 aa23.03■■□□□ 1.28
CACNA1A-249ENST00000637777 COL17A1Q9UMD9 1497 aaPredicted RBP23.01■■□□□ 1.27
CACNA1A-249ENST00000637777 TROQ12816 1431 aaPredicted RBP23■■□□□ 1.27
CACNA1A-249ENST00000637777 CFAP74Q9C0B2 1584 aa22.98■■□□□ 1.27
CACNA1A-249ENST00000637777 NEO1Q92859 1461 aa22.97■■□□□ 1.27
CACNA1A-249ENST00000637777 MYO5CQ9NQX4 1742 aa22.96■■□□□ 1.27
CACNA1A-249ENST00000637777 FANCAO15360 1455 aa22.95■■□□□ 1.26
CACNA1A-249ENST00000637777 PHLDB1Q86UU1 1377 aa22.95■■□□□ 1.26
CACNA1A-249ENST00000637777 AEBP2Q6ZN18 517 aaPredicted RBP22.94■■□□□ 1.26
CACNA1A-249ENST00000637777 ARAP3Q8WWN8 1544 aa22.92■■□□□ 1.26
CACNA1A-249ENST00000637777 AKNAQ7Z591 1439 aa22.9■■□□□ 1.26
CACNA1A-249ENST00000637777 ARHGAP5Q13017 1502 aa22.88■■□□□ 1.25
CACNA1A-249ENST00000637777 RAPGEF3O95398 923 aa22.88■■□□□ 1.25
CACNA1A-249ENST00000637777 PLCH2O75038 1416 aa22.88■■□□□ 1.25
CACNA1A-249ENST00000637777 MTUS2Q5JR59 1369 aa22.88■■□□□ 1.25
CACNA1A-249ENST00000637777 DENND4BO75064 1496 aaPredicted RBP22.85■■□□□ 1.25
CACNA1A-249ENST00000637777 EFCAB2Q5VUJ9 269 aa22.85■■□□□ 1.25
CACNA1A-249ENST00000637777 ADGRL1O94910 1474 aa22.84■■□□□ 1.25
CACNA1A-249ENST00000637777 VPS8Q8N3P4 1428 aa22.83■■□□□ 1.25
CACNA1A-249ENST00000637777 PREX2Q70Z35 1606 aa22.8■■□□□ 1.24
CACNA1A-249ENST00000637777 FRMPD1Q5SYB0 1578 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms