RNA–Protein interactions for RNA: ENST00000637709.2

SCN8A-214, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 2,489 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-214ENST00000637709 CUL7Q14999 1698 aa23.22■■□□□ 1.31
SCN8A-214ENST00000637709 ITGAEP38570 1179 aa23.19■■□□□ 1.3
SCN8A-214ENST00000637709 MRC2Q9UBG0 1479 aa23.19■■□□□ 1.3
SCN8A-214ENST00000637709 CTTNBP2Q8WZ74 1663 aa23.17■■□□□ 1.3
SCN8A-214ENST00000637709 ZNF608Q9ULD9 1512 aaPredicted RBP23.14■■□□□ 1.3
SCN8A-214ENST00000637709 ERCC6Q03468 1493 aa23.13■■□□□ 1.29
SCN8A-214ENST00000637709 PCF11O94913 1555 aaKnown RBP23.13■■□□□ 1.29
SCN8A-214ENST00000637709 PBRM1Q86U86 1689 aa23.1■■□□□ 1.29
SCN8A-214ENST00000637709 TIAM1Q13009 1591 aa23.07■■□□□ 1.28
SCN8A-214ENST00000637709 FHAD1B1AJZ9 1412 aa23.01■■□□□ 1.27
SCN8A-214ENST00000637709 WDR62O43379 1518 aa23■■□□□ 1.27
SCN8A-214ENST00000637709 ARID3CA6NKF2 412 aa23■■□□□ 1.27
SCN8A-214ENST00000637709 LRRC9Q6ZRR7 1453 aa22.99■■□□□ 1.27
SCN8A-214ENST00000637709 CCNB3Q8WWL7 1395 aa22.97■■□□□ 1.27
SCN8A-214ENST00000637709 PHLDB1Q86UU1 1377 aa22.97■■□□□ 1.27
SCN8A-214ENST00000637709 EFCAB5A4FU69 1503 aa22.96■■□□□ 1.27
SCN8A-214ENST00000637709 RRBP1Q9P2E9 1410 aaKnown RBP22.96■■□□□ 1.27
SCN8A-214ENST00000637709 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
SCN8A-214ENST00000637709 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
SCN8A-214ENST00000637709 GRIN2BQ13224 1484 aa22.93■■□□□ 1.26
SCN8A-214ENST00000637709 IFT140Q96RY7 1462 aa22.93■■□□□ 1.26
SCN8A-214ENST00000637709 FBLN2P98095 1184 aa22.92■■□□□ 1.26
SCN8A-214ENST00000637709 CFAP43Q8NDM7 1665 aa22.92■■□□□ 1.26
SCN8A-214ENST00000637709 LRRIQ1Q96JM4 1722 aa22.91■■□□□ 1.26
SCN8A-214ENST00000637709 EIF4G3O43432 1585 aaKnown RBP22.9■■□□□ 1.26
SCN8A-214ENST00000637709 THOC2Q8NI27 1593 aaKnown RBP22.9■■□□□ 1.26
SCN8A-214ENST00000637709 CASKIN1Q8WXD9 1431 aa22.9■■□□□ 1.26
SCN8A-214ENST00000637709 SNAPC4Q5SXM2 1469 aa22.9■■□□□ 1.26
SCN8A-214ENST00000637709 FYCO1Q9BQS8 1478 aa22.9■■□□□ 1.26
SCN8A-214ENST00000637709 SAMD9Q5K651 1589 aa22.89■■□□□ 1.26
SCN8A-214ENST00000637709 FMN1Q68DA7 1419 aa22.87■■□□□ 1.25
SCN8A-214ENST00000637709 MAP3K1Q13233 1512 aa22.84■■□□□ 1.25
SCN8A-214ENST00000637709 IQGAP2Q13576 1575 aa22.84■■□□□ 1.25
SCN8A-214ENST00000637709 MTUS2Q5JR59 1369 aa22.8■■□□□ 1.24
SCN8A-214ENST00000637709 DHX57Q6P158 1386 aaKnown RBP22.79■■□□□ 1.24
SCN8A-214ENST00000637709 CHMP7Q8WUX9 453 aaPredicted RBP22.77■■□□□ 1.24
SCN8A-214ENST00000637709 GRIN2AQ12879 1464 aa22.73■■□□□ 1.23
SCN8A-214ENST00000637709 RAB3GAP2Q9H2M9 1393 aa22.72■■□□□ 1.23
SCN8A-214ENST00000637709 CDK13Q14004 1512 aaKnown RBP22.7■■□□□ 1.22
SCN8A-214ENST00000637709 MAGI3Q5TCQ9 1506 aa22.7■■□□□ 1.22
SCN8A-214ENST00000637709 DIEXFQ68CQ4 756 aaKnown RBP22.66■■□□□ 1.22
SCN8A-214ENST00000637709 CEP170Q5SW79 1584 aa22.64■■□□□ 1.22
SCN8A-214ENST00000637709 NCOA2Q15596 1464 aa22.64■■□□□ 1.22
SCN8A-214ENST00000637709 DISP1Q96F81 1524 aa22.63■■□□□ 1.21
SCN8A-214ENST00000637709 KIAA0586Q9BVV6 1533 aa22.63■■□□□ 1.21
SCN8A-214ENST00000637709 FGD6Q6ZV73 1430 aa22.63■■□□□ 1.21
SCN8A-214ENST00000637709 UGGT2Q9NYU1 1516 aa22.61■■□□□ 1.21
SCN8A-214ENST00000637709 SYNJ2O15056 1496 aa22.6■■□□□ 1.21
SCN8A-214ENST00000637709 MAGI1Q96QZ7 1491 aaPredicted RBP22.6■■□□□ 1.21
SCN8A-214ENST00000637709 EPRSP07814 1512 aaKnown RBP22.6■■□□□ 1.21
SCN8A-214ENST00000637709 KIAA0556O60303 1618 aa22.6■■□□□ 1.21
SCN8A-214ENST00000637709 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
SCN8A-214ENST00000637709 SETD5Q9C0A6 1442 aa22.59■■□□□ 1.21
SCN8A-214ENST00000637709 HECW1Q76N89 1606 aa22.59■■□□□ 1.21
SCN8A-214ENST00000637709 SUPT6HQ7KZ85 1726 aaKnown RBP22.57■■□□□ 1.2
SCN8A-214ENST00000637709 PTPRKQ15262 1439 aa22.56■■□□□ 1.2
SCN8A-214ENST00000637709 CHIC2Q9UKJ5 165 aa22.55■■□□□ 1.2
SCN8A-214ENST00000637709 EHBP1L1Q8N3D4 1523 aa22.54■■□□□ 1.2
SCN8A-214ENST00000637709 MYOM3Q5VTT5 1437 aa22.53■■□□□ 1.2
SCN8A-214ENST00000637709 NEUROD1Q13562 356 aa22.52■■□□□ 1.2
SCN8A-214ENST00000637709 JPH4Q96JJ6 628 aa22.52■■□□□ 1.2
SCN8A-214ENST00000637709 SIN3AQ96ST3 1273 aa22.52■■□□□ 1.2
SCN8A-214ENST00000637709 CCDC18Q5T9S5 1454 aa22.51■■□□□ 1.19
SCN8A-214ENST00000637709 PLB1Q6P1J6 1458 aa22.51■■□□□ 1.19
SCN8A-214ENST00000637709 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
SCN8A-214ENST00000637709 NUP153P49790 1475 aaKnown RBP22.48■■□□□ 1.19
SCN8A-214ENST00000637709 RRP7BPQ9NSQ0 103 aa22.47■■□□□ 1.19
SCN8A-214ENST00000637709 PTPN23Q9H3S7 1636 aa22.47■■□□□ 1.19
SCN8A-214ENST00000637709 RAPGEF6Q8TEU7 1601 aa22.45■■□□□ 1.18
SCN8A-214ENST00000637709 CLSPNQ9HAW4 1339 aa22.44■■□□□ 1.18
SCN8A-214ENST00000637709 NUP160Q12769 1436 aa22.43■■□□□ 1.18
SCN8A-214ENST00000637709 ZNF644Q9H582 1327 aaPredicted RBP22.42■■□□□ 1.18
SCN8A-214ENST00000637709 ARHGEF11O15085 1522 aa22.41■■□□□ 1.18
SCN8A-214ENST00000637709 PRG4Q92954 1404 aaPredicted RBP22.4■■□□□ 1.18
SCN8A-214ENST00000637709 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.38■■□□□ 1.17
SCN8A-214ENST00000637709 CHD1O14646 1710 aa22.37■■□□□ 1.17
SCN8A-214ENST00000637709 CARMIL2Q6F5E8 1435 aa22.35■■□□□ 1.17
SCN8A-214ENST00000637709 NAIPQ13075 1403 aa22.34■■□□□ 1.17
SCN8A-214ENST00000637709 ZNF777Q9ULD5 760 aaPredicted RBP22.33■■□□□ 1.17
SCN8A-214ENST00000637709 HFM1A2PYH4 1435 aa22.31■■□□□ 1.16
SCN8A-214ENST00000637709 MIER1Q8N108 512 aa22.31■■□□□ 1.16
SCN8A-214ENST00000637709 KIF14Q15058 1648 aa22.3■■□□□ 1.16
SCN8A-214ENST00000637709 KDM6BO15054 1643 aa22.3■■□□□ 1.16
SCN8A-214ENST00000637709 CDK11AQ9UQ88 783 aaPredicted RBP22.28■■□□□ 1.16
SCN8A-214ENST00000637709 TRIM52Q96A61 297 aa22.27■■□□□ 1.16
SCN8A-214ENST00000637709 YTHDC1Q96MU7 727 aaKnown RBP22.27■■□□□ 1.16
SCN8A-214ENST00000637709 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
SCN8A-214ENST00000637709 HIRIP3Q9BW71 556 aaPredicted RBP22.25■■□□□ 1.15
SCN8A-214ENST00000637709 FOXD1Q16676 465 aa22.23■■□□□ 1.15
SCN8A-214ENST00000637709 ERCC6L2Q5T890 1561 aa22.22■■□□□ 1.15
SCN8A-214ENST00000637709 TROQ12816 1431 aaPredicted RBP22.22■■□□□ 1.15
SCN8A-214ENST00000637709 CFDP1Q9UEE9 299 aaPredicted RBP22.22■■□□□ 1.15
SCN8A-214ENST00000637709 MIA2Q96PC5 1412 aa22.2■■□□□ 1.14
SCN8A-214ENST00000637709 PTPRGP23470 1445 aa22.19■■□□□ 1.14
SCN8A-214ENST00000637709 UACAQ9BZF9 1416 aa22.19■■□□□ 1.14
SCN8A-214ENST00000637709 ATP10BO94823 1461 aa22.18■■□□□ 1.14
SCN8A-214ENST00000637709 ABCA8O94911 1581 aa22.18■■□□□ 1.14
SCN8A-214ENST00000637709 DAPK1P53355 1430 aa22.18■■□□□ 1.14
SCN8A-214ENST00000637709 PLEKHD1A6NEE1 506 aa22.17■■□□□ 1.14
SCN8A-214ENST00000637709 ABCC5O15440 1437 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms