RNA–Protein interactions for RNA: ENST00000637555.1

CNTNAP2-220, Transcript of contactin associated protein like 2, humanhuman

TSL 5

Gene CNTNAP2, Length 2,341 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP2-220ENST00000637555 HRCP23327 699 aa20.42■□□□□ 0.86
CNTNAP2-220ENST00000637555 NUP160Q12769 1436 aa20.41■□□□□ 0.86
CNTNAP2-220ENST00000637555 CHMP7Q8WUX9 453 aaPredicted RBP20.41■□□□□ 0.86
CNTNAP2-220ENST00000637555 IQGAP2Q13576 1575 aa20.37■□□□□ 0.85
CNTNAP2-220ENST00000637555 FBLN2P98095 1184 aa20.36■□□□□ 0.85
CNTNAP2-220ENST00000637555 CEP162Q5TB80 1403 aa20.34■□□□□ 0.85
CNTNAP2-220ENST00000637555 KIAA0586Q9BVV6 1533 aa20.34■□□□□ 0.85
CNTNAP2-220ENST00000637555 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
CNTNAP2-220ENST00000637555 SAMD9Q5K651 1589 aa20.28■□□□□ 0.84
CNTNAP2-220ENST00000637555 UGGT2Q9NYU1 1516 aa20.27■□□□□ 0.84
CNTNAP2-220ENST00000637555 SHROOM2Q13796 1616 aa20.27■□□□□ 0.84
CNTNAP2-220ENST00000637555 CLIP1P30622 1438 aa20.26■□□□□ 0.83
CNTNAP2-220ENST00000637555 EFCAB5A4FU69 1503 aa20.25■□□□□ 0.83
CNTNAP2-220ENST00000637555 ARHGAP35Q9NRY4 1499 aa20.24■□□□□ 0.83
CNTNAP2-220ENST00000637555 ARAP1Q96P48 1450 aa20.19■□□□□ 0.82
CNTNAP2-220ENST00000637555 KIAA0556O60303 1618 aa20.19■□□□□ 0.82
CNTNAP2-220ENST00000637555 DISP1Q96F81 1524 aa20.18■□□□□ 0.82
CNTNAP2-220ENST00000637555 RANGAP1P46060 587 aaPredicted RBP20.18■□□□□ 0.82
CNTNAP2-220ENST00000637555 JPH4Q96JJ6 628 aa20.12■□□□□ 0.81
CNTNAP2-220ENST00000637555 PPARGC1BQ86YN6 1023 aaKnown RBP20.11■□□□□ 0.81
CNTNAP2-220ENST00000637555 OSCARQ8IYS5 282 aa20.11■□□□□ 0.81
CNTNAP2-220ENST00000637555 FHOD3Q2V2M9 1422 aa20.1■□□□□ 0.81
CNTNAP2-220ENST00000637555 ERCC6L2Q5T890 1561 aa20.1■□□□□ 0.81
CNTNAP2-220ENST00000637555 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.8
CNTNAP2-220ENST00000637555 TRIM26Q12899 539 aaPredicted RBP20.05■□□□□ 0.8
CNTNAP2-220ENST00000637555 VPS8Q8N3P4 1428 aa20.05■□□□□ 0.8
CNTNAP2-220ENST00000637555 P3H3Q8IVL6 736 aa20.05■□□□□ 0.8
CNTNAP2-220ENST00000637555 CARMIL2Q6F5E8 1435 aa20.05■□□□□ 0.8
CNTNAP2-220ENST00000637555 PCF11O94913 1555 aaKnown RBP20.02■□□□□ 0.8
CNTNAP2-220ENST00000637555 LRRIQ1Q96JM4 1722 aa19.99■□□□□ 0.79
CNTNAP2-220ENST00000637555 FMN1Q68DA7 1419 aa19.98■□□□□ 0.79
CNTNAP2-220ENST00000637555 RAPGEF6Q8TEU7 1601 aa19.94■□□□□ 0.78
CNTNAP2-220ENST00000637555 FYCO1Q9BQS8 1478 aa19.94■□□□□ 0.78
CNTNAP2-220ENST00000637555 CASKIN1Q8WXD9 1431 aa19.93■□□□□ 0.78
CNTNAP2-220ENST00000637555 ABCA8O94911 1581 aa19.93■□□□□ 0.78
CNTNAP2-220ENST00000637555 HECW1Q76N89 1606 aa19.9■□□□□ 0.78
CNTNAP2-220ENST00000637555 CFAP43Q8NDM7 1665 aa19.9■□□□□ 0.78
CNTNAP2-220ENST00000637555 ARHGEF11O15085 1522 aa19.9■□□□□ 0.78
CNTNAP2-220ENST00000637555 RIMBP3CA6NJZ7 1639 aa19.9■□□□□ 0.78
CNTNAP2-220ENST00000637555 RIMBP3BA6NNM3 1639 aa19.9■□□□□ 0.78
CNTNAP2-220ENST00000637555 RIMBP3Q9UFD9 1639 aa19.9■□□□□ 0.78
CNTNAP2-220ENST00000637555 PTPRGP23470 1445 aa19.88■□□□□ 0.77
CNTNAP2-220ENST00000637555 PLB1Q6P1J6 1458 aa19.88■□□□□ 0.77
CNTNAP2-220ENST00000637555 TIAM1Q13009 1591 aa19.84■□□□□ 0.77
CNTNAP2-220ENST00000637555 NUP153P49790 1475 aaKnown RBP19.84■□□□□ 0.77
CNTNAP2-220ENST00000637555 MAP3K1Q13233 1512 aa19.83■□□□□ 0.77
CNTNAP2-220ENST00000637555 TTBK1Q5TCY1 1321 aaPredicted RBP19.83■□□□□ 0.77
CNTNAP2-220ENST00000637555 ABCC2Q92887 1545 aa19.81■□□□□ 0.76
CNTNAP2-220ENST00000637555 UACAQ9BZF9 1416 aa19.8■□□□□ 0.76
CNTNAP2-220ENST00000637555 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
CNTNAP2-220ENST00000637555 EPRSP07814 1512 aaKnown RBP19.79■□□□□ 0.76
CNTNAP2-220ENST00000637555 UHRF1BP1LA0JNW5 1464 aa19.79■□□□□ 0.76
CNTNAP2-220ENST00000637555 CCDC18Q5T9S5 1454 aa19.79■□□□□ 0.76
CNTNAP2-220ENST00000637555 CDK13Q14004 1512 aaKnown RBP19.77■□□□□ 0.76
CNTNAP2-220ENST00000637555 ZCCHC11Q5TAX3 1644 aaKnown RBP19.73■□□□□ 0.75
CNTNAP2-220ENST00000637555 ATP1B4Q9UN42 357 aaPredicted RBP19.72■□□□□ 0.75
CNTNAP2-220ENST00000637555 MAGI3Q5TCQ9 1506 aa19.72■□□□□ 0.75
CNTNAP2-220ENST00000637555 ATP10BO94823 1461 aa19.71■□□□□ 0.75
CNTNAP2-220ENST00000637555 KDM5BQ9UGL1 1544 aa19.7■□□□□ 0.74
CNTNAP2-220ENST00000637555 LRRC9Q6ZRR7 1453 aa19.7■□□□□ 0.74
CNTNAP2-220ENST00000637555 APLP2Q06481 763 aa19.68■□□□□ 0.74
CNTNAP2-220ENST00000637555 KANK4Q5T7N3 995 aaPredicted RBP19.67■□□□□ 0.74
CNTNAP2-220ENST00000637555 EHBP1L1Q8N3D4 1523 aa19.66■□□□□ 0.74
CNTNAP2-220ENST00000637555 ARID3CA6NKF2 412 aa19.64■□□□□ 0.74
CNTNAP2-220ENST00000637555 SUPT6HQ7KZ85 1726 aaKnown RBP19.62■□□□□ 0.73
CNTNAP2-220ENST00000637555 TROQ12816 1431 aaPredicted RBP19.58■□□□□ 0.72
CNTNAP2-220ENST00000637555 KIF14Q15058 1648 aa19.58■□□□□ 0.72
CNTNAP2-220ENST00000637555 MTUS2Q5JR59 1369 aa19.58■□□□□ 0.72
CNTNAP2-220ENST00000637555 CYB5RLQ6IPT4 315 aa19.57■□□□□ 0.72
CNTNAP2-220ENST00000637555 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.53■□□□□ 0.72
CNTNAP2-220ENST00000637555 HNRNPUL2Q1KMD3 747 aaKnown RBP19.53■□□□□ 0.72
CNTNAP2-220ENST00000637555 DNAJC5Q9H3Z4 198 aa19.53■□□□□ 0.72
CNTNAP2-220ENST00000637555 NCOA2Q15596 1464 aa19.53■□□□□ 0.72
CNTNAP2-220ENST00000637555 CDK11AQ9UQ88 783 aaPredicted RBP19.52■□□□□ 0.72
CNTNAP2-220ENST00000637555 MAPKBP1O60336 1514 aa19.5■□□□□ 0.71
CNTNAP2-220ENST00000637555 WDR7Q9Y4E6 1490 aa19.5■□□□□ 0.71
CNTNAP2-220ENST00000637555 ZEB1P37275 1124 aaPredicted RBP19.5■□□□□ 0.71
CNTNAP2-220ENST00000637555 CDC42BPAQ5VT25 1732 aa19.49■□□□□ 0.71
CNTNAP2-220ENST00000637555 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
CNTNAP2-220ENST00000637555 ASXL2Q76L83 1435 aa19.48■□□□□ 0.71
CNTNAP2-220ENST00000637555 ABCC10Q5T3U5 1492 aa19.48■□□□□ 0.71
CNTNAP2-220ENST00000637555 PHLDB1Q86UU1 1377 aa19.47■□□□□ 0.71
CNTNAP2-220ENST00000637555 TTC37Q6PGP7 1564 aa19.47■□□□□ 0.71
CNTNAP2-220ENST00000637555 ITSN2Q9NZM3 1697 aa19.46■□□□□ 0.71
CNTNAP2-220ENST00000637555 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.45■□□□□ 0.7
CNTNAP2-220ENST00000637555 MYO5CQ9NQX4 1742 aa19.44■□□□□ 0.7
CNTNAP2-220ENST00000637555 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
CNTNAP2-220ENST00000637555 ABCA9Q8IUA7 1624 aa19.43■□□□□ 0.7
CNTNAP2-220ENST00000637555 CDC42BPBQ9Y5S2 1711 aa19.42■□□□□ 0.7
CNTNAP2-220ENST00000637555 PREX2Q70Z35 1606 aa19.42■□□□□ 0.7
CNTNAP2-220ENST00000637555 MYOM3Q5VTT5 1437 aa19.41■□□□□ 0.7
CNTNAP2-220ENST00000637555 RRBP1Q9P2E9 1410 aaKnown RBP19.41■□□□□ 0.7
CNTNAP2-220ENST00000637555 GPATCH8Q9UKJ3 1502 aaKnown RBP19.38■□□□□ 0.69
CNTNAP2-220ENST00000637555 FGD6Q6ZV73 1430 aa19.37■□□□□ 0.69
CNTNAP2-220ENST00000637555 PTPN23Q9H3S7 1636 aa19.37■□□□□ 0.69
CNTNAP2-220ENST00000637555 DIP2BQ9P265 1576 aa19.36■□□□□ 0.69
CNTNAP2-220ENST00000637555 CCNB3Q8WWL7 1395 aa19.36■□□□□ 0.69
CNTNAP2-220ENST00000637555 KIF13AQ9H1H9 1805 aa19.36■□□□□ 0.69
CNTNAP2-220ENST00000637555 GLI2P10070 1586 aa19.35■□□□□ 0.69
CNTNAP2-220ENST00000637555 KCNH8Q96L42 1107 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms