RNA–Protein interactions for RNA: ENST00000637540.1

SCN8A-213, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 93 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-213ENST00000637540 EIF4G3O43432 1585 aaKnown RBP7.52□□□□□ -1.21
SCN8A-213ENST00000637540 EFCAB5A4FU69 1503 aa7.52□□□□□ -1.21
SCN8A-213ENST00000637540 GRIN2BQ13224 1484 aa7.51□□□□□ -1.21
SCN8A-213ENST00000637540 LRRIQ1Q96JM4 1722 aa7.51□□□□□ -1.21
SCN8A-213ENST00000637540 FHAD1B1AJZ9 1412 aa7.51□□□□□ -1.21
SCN8A-213ENST00000637540 CFAP43Q8NDM7 1665 aa7.5□□□□□ -1.21
SCN8A-213ENST00000637540 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
SCN8A-213ENST00000637540 PCF11O94913 1555 aaKnown RBP7.48□□□□□ -1.21
SCN8A-213ENST00000637540 TIAM1Q13009 1591 aa7.48□□□□□ -1.21
SCN8A-213ENST00000637540 KANK4Q5T7N3 995 aaPredicted RBP7.46□□□□□ -1.22
SCN8A-213ENST00000637540 SNAPC4Q5SXM2 1469 aa7.46□□□□□ -1.22
SCN8A-213ENST00000637540 UGGT2Q9NYU1 1516 aa7.46□□□□□ -1.22
SCN8A-213ENST00000637540 IQGAP2Q13576 1575 aa7.46□□□□□ -1.22
SCN8A-213ENST00000637540 CASKIN1Q8WXD9 1431 aa7.45□□□□□ -1.22
SCN8A-213ENST00000637540 MAGI1Q96QZ7 1491 aaPredicted RBP7.45□□□□□ -1.22
SCN8A-213ENST00000637540 FHOD3Q2V2M9 1422 aa7.44□□□□□ -1.22
SCN8A-213ENST00000637540 RRBP1Q9P2E9 1410 aaKnown RBP7.44□□□□□ -1.22
SCN8A-213ENST00000637540 GRIN2AQ12879 1464 aa7.44□□□□□ -1.22
SCN8A-213ENST00000637540 FYCO1Q9BQS8 1478 aa7.44□□□□□ -1.22
SCN8A-213ENST00000637540 RANGAP1P46060 587 aaPredicted RBP7.44□□□□□ -1.22
SCN8A-213ENST00000637540 KIAA0586Q9BVV6 1533 aa7.43□□□□□ -1.22
SCN8A-213ENST00000637540 CEP170Q5SW79 1584 aa7.43□□□□□ -1.22
SCN8A-213ENST00000637540 LRRC9Q6ZRR7 1453 aa7.43□□□□□ -1.22
SCN8A-213ENST00000637540 SYNJ2O15056 1496 aa7.42□□□□□ -1.22
SCN8A-213ENST00000637540 DISP1Q96F81 1524 aa7.42□□□□□ -1.22
SCN8A-213ENST00000637540 NUP160Q12769 1436 aa7.41□□□□□ -1.22
SCN8A-213ENST00000637540 FMN1Q68DA7 1419 aa7.41□□□□□ -1.22
SCN8A-213ENST00000637540 KIAA0556O60303 1618 aa7.39□□□□□ -1.23
SCN8A-213ENST00000637540 TTBK1Q5TCY1 1321 aaPredicted RBP7.39□□□□□ -1.23
SCN8A-213ENST00000637540 P3H3Q8IVL6 736 aa7.39□□□□□ -1.23
SCN8A-213ENST00000637540 APLP2Q06481 763 aa7.38□□□□□ -1.23
SCN8A-213ENST00000637540 CHD1O14646 1710 aa7.38□□□□□ -1.23
SCN8A-213ENST00000637540 ARHGEF11O15085 1522 aa7.37□□□□□ -1.23
SCN8A-213ENST00000637540 MAGI3Q5TCQ9 1506 aa7.37□□□□□ -1.23
SCN8A-213ENST00000637540 ZEB1P37275 1124 aaPredicted RBP7.36□□□□□ -1.23
SCN8A-213ENST00000637540 PHLDB1Q86UU1 1377 aa7.35□□□□□ -1.23
SCN8A-213ENST00000637540 HECW1Q76N89 1606 aa7.35□□□□□ -1.23
SCN8A-213ENST00000637540 SHROOM2Q13796 1616 aa7.34□□□□□ -1.23
SCN8A-213ENST00000637540 CCNB3Q8WWL7 1395 aa7.34□□□□□ -1.23
SCN8A-213ENST00000637540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.34□□□□□ -1.23
SCN8A-213ENST00000637540 RAPGEF6Q8TEU7 1601 aa7.34□□□□□ -1.24
SCN8A-213ENST00000637540 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.33□□□□□ -1.24
SCN8A-213ENST00000637540 EPRSP07814 1512 aaKnown RBP7.33□□□□□ -1.24
SCN8A-213ENST00000637540 SUPT6HQ7KZ85 1726 aaKnown RBP7.33□□□□□ -1.24
SCN8A-213ENST00000637540 CCDC18Q5T9S5 1454 aa7.33□□□□□ -1.24
SCN8A-213ENST00000637540 EHBP1L1Q8N3D4 1523 aa7.32□□□□□ -1.24
SCN8A-213ENST00000637540 NUP153P49790 1475 aaKnown RBP7.32□□□□□ -1.24
SCN8A-213ENST00000637540 ABCA8O94911 1581 aa7.32□□□□□ -1.24
SCN8A-213ENST00000637540 CDK13Q14004 1512 aaKnown RBP7.31□□□□□ -1.24
SCN8A-213ENST00000637540 NCOA2Q15596 1464 aa7.3□□□□□ -1.24
SCN8A-213ENST00000637540 HNRNPUL2Q1KMD3 747 aaKnown RBP7.3□□□□□ -1.24
SCN8A-213ENST00000637540 CHMP7Q8WUX9 453 aaPredicted RBP7.3□□□□□ -1.24
SCN8A-213ENST00000637540 JPH4Q96JJ6 628 aa7.3□□□□□ -1.24
SCN8A-213ENST00000637540 FGD6Q6ZV73 1430 aa7.29□□□□□ -1.24
SCN8A-213ENST00000637540 CLASP1Q7Z460 1538 aa7.29□□□□□ -1.24
SCN8A-213ENST00000637540 ADCY10Q96PN6 1610 aa7.29□□□□□ -1.24
SCN8A-213ENST00000637540 TCOF1Q13428 1488 aaKnown RBP7.28□□□□□ -1.24
SCN8A-213ENST00000637540 MYOM3Q5VTT5 1437 aa7.27□□□□□ -1.24
SCN8A-213ENST00000637540 PTPN23Q9H3S7 1636 aa7.27□□□□□ -1.25
SCN8A-213ENST00000637540 CCER1Q8TC90 406 aaPredicted RBP7.27□□□□□ -1.25
SCN8A-213ENST00000637540 DHX57Q6P158 1386 aaKnown RBP7.27□□□□□ -1.25
SCN8A-213ENST00000637540 PLB1Q6P1J6 1458 aa7.27□□□□□ -1.25
SCN8A-213ENST00000637540 PTPRKQ15262 1439 aa7.27□□□□□ -1.25
SCN8A-213ENST00000637540 ERCC6L2Q5T890 1561 aa7.26□□□□□ -1.25
SCN8A-213ENST00000637540 MTUS2Q5JR59 1369 aa7.26□□□□□ -1.25
SCN8A-213ENST00000637540 CARMIL2Q6F5E8 1435 aa7.26□□□□□ -1.25
SCN8A-213ENST00000637540 CLSPNQ9HAW4 1339 aa7.25□□□□□ -1.25
SCN8A-213ENST00000637540 ATP10BO94823 1461 aa7.24□□□□□ -1.25
SCN8A-213ENST00000637540 ATP1B4Q9UN42 357 aaPredicted RBP7.24□□□□□ -1.25
SCN8A-213ENST00000637540 PRG4Q92954 1404 aaPredicted RBP7.24□□□□□ -1.25
SCN8A-213ENST00000637540 MIA2Q96PC5 1412 aa7.24□□□□□ -1.25
SCN8A-213ENST00000637540 SETD5Q9C0A6 1442 aa7.24□□□□□ -1.25
SCN8A-213ENST00000637540 CDC42BPAQ5VT25 1732 aa7.24□□□□□ -1.25
SCN8A-213ENST00000637540 KIF14Q15058 1648 aa7.23□□□□□ -1.25
SCN8A-213ENST00000637540 MAPKBP1O60336 1514 aa7.23□□□□□ -1.25
SCN8A-213ENST00000637540 FBLN2P98095 1184 aa7.23□□□□□ -1.25
SCN8A-213ENST00000637540 TROQ12816 1431 aaPredicted RBP7.23□□□□□ -1.25
SCN8A-213ENST00000637540 GCC2Q8IWJ2 1684 aa7.22□□□□□ -1.25
SCN8A-213ENST00000637540 RAB3GAP2Q9H2M9 1393 aa7.22□□□□□ -1.25
SCN8A-213ENST00000637540 ABCC10Q5T3U5 1492 aa7.22□□□□□ -1.25
SCN8A-213ENST00000637540 DNMT1P26358 1616 aaKnown RBP7.21□□□□□ -1.26
SCN8A-213ENST00000637540 ITSN2Q9NZM3 1697 aa7.21□□□□□ -1.26
SCN8A-213ENST00000637540 HFM1A2PYH4 1435 aa7.2□□□□□ -1.26
SCN8A-213ENST00000637540 NAIPQ13075 1403 aa7.2□□□□□ -1.26
SCN8A-213ENST00000637540 AKNAQ7Z591 1439 aa7.2□□□□□ -1.26
SCN8A-213ENST00000637540 GPATCH8Q9UKJ3 1502 aaKnown RBP7.2□□□□□ -1.26
SCN8A-213ENST00000637540 PTPRGP23470 1445 aa7.19□□□□□ -1.26
SCN8A-213ENST00000637540 CDC42BPBQ9Y5S2 1711 aa7.19□□□□□ -1.26
SCN8A-213ENST00000637540 KDM6BO15054 1643 aa7.19□□□□□ -1.26
SCN8A-213ENST00000637540 CROCC2H7BZ55 1655 aa7.19□□□□□ -1.26
SCN8A-213ENST00000637540 ABCC2Q92887 1545 aa7.18□□□□□ -1.26
SCN8A-213ENST00000637540 FAM50AQ14320 339 aaKnown RBP7.18□□□□□ -1.26
SCN8A-213ENST00000637540 UACAQ9BZF9 1416 aa7.18□□□□□ -1.26
SCN8A-213ENST00000637540 UHRF1BP1LA0JNW5 1464 aa7.17□□□□□ -1.26
SCN8A-213ENST00000637540 DENND4BO75064 1496 aaPredicted RBP7.17□□□□□ -1.26
SCN8A-213ENST00000637540 ABCC5O15440 1437 aa7.17□□□□□ -1.26
SCN8A-213ENST00000637540 ADGBQ8N7X0 1667 aa7.16□□□□□ -1.26
SCN8A-213ENST00000637540 ITGAEP38570 1179 aa7.16□□□□□ -1.26
SCN8A-213ENST00000637540 DAPK1P53355 1430 aa7.16□□□□□ -1.26
SCN8A-213ENST00000637540 KDM5BQ9UGL1 1544 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms