RNA–Protein interactions for RNA: ENST00000637537.1

CLN5-219, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 4

Gene CLN5, Length 2,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-219ENST00000637537 CCER1Q8TC90 406 aaPredicted RBP28.45■■■□□ 2.14
CLN5-219ENST00000637537 HNRNPUL2Q1KMD3 747 aaKnown RBP28.44■■■□□ 2.14
CLN5-219ENST00000637537 WDR62O43379 1518 aa28.42■■■□□ 2.14
CLN5-219ENST00000637537 CTTNBP2Q8WZ74 1663 aa28.42■■■□□ 2.14
CLN5-219ENST00000637537 FHOD3Q2V2M9 1422 aa28.4■■■□□ 2.14
CLN5-219ENST00000637537 ZNF608Q9ULD9 1512 aaPredicted RBP28.39■■■□□ 2.14
CLN5-219ENST00000637537 PBRM1Q86U86 1689 aa28.38■■■□□ 2.13
CLN5-219ENST00000637537 ATP1B4Q9UN42 357 aaPredicted RBP28.34■■■□□ 2.13
CLN5-219ENST00000637537 IFT140Q96RY7 1462 aa28.33■■■□□ 2.13
CLN5-219ENST00000637537 FHAD1B1AJZ9 1412 aa28.28■■■□□ 2.12
CLN5-219ENST00000637537 EFCAB5A4FU69 1503 aa28.28■■■□□ 2.12
CLN5-219ENST00000637537 PCF11O94913 1555 aaKnown RBP28.27■■■□□ 2.12
CLN5-219ENST00000637537 GRIN2BQ13224 1484 aa28.27■■■□□ 2.12
CLN5-219ENST00000637537 THOC2Q8NI27 1593 aaKnown RBP28.27■■■□□ 2.12
CLN5-219ENST00000637537 TIAM1Q13009 1591 aa28.25■■■□□ 2.11
CLN5-219ENST00000637537 SCAF1Q9H7N4 1312 aaKnown RBP28.25■■■□□ 2.11
CLN5-219ENST00000637537 ADAMTS12P58397 1594 aa28.24■■■□□ 2.11
CLN5-219ENST00000637537 EIF4G3O43432 1585 aaKnown RBP28.17■■■□□ 2.1
CLN5-219ENST00000637537 SAMD9Q5K651 1589 aa28.15■■■□□ 2.1
CLN5-219ENST00000637537 MAP3K1Q13233 1512 aa28.15■■■□□ 2.1
CLN5-219ENST00000637537 LRRC9Q6ZRR7 1453 aa28.14■■■□□ 2.1
CLN5-219ENST00000637537 SNAPC4Q5SXM2 1469 aa28.13■■■□□ 2.09
CLN5-219ENST00000637537 CASKIN1Q8WXD9 1431 aa28.12■■■□□ 2.09
CLN5-219ENST00000637537 RRBP1Q9P2E9 1410 aaKnown RBP28.12■■■□□ 2.09
CLN5-219ENST00000637537 FYCO1Q9BQS8 1478 aa28.11■■■□□ 2.09
CLN5-219ENST00000637537 FMN1Q68DA7 1419 aa28.11■■■□□ 2.09
CLN5-219ENST00000637537 CFAP43Q8NDM7 1665 aa28.08■■■□□ 2.09
CLN5-219ENST00000637537 CCNB3Q8WWL7 1395 aa28.07■■■□□ 2.08
CLN5-219ENST00000637537 IQGAP2Q13576 1575 aa28.06■■■□□ 2.08
CLN5-219ENST00000637537 ITGAEP38570 1179 aa28.06■■■□□ 2.08
CLN5-219ENST00000637537 PHLDB1Q86UU1 1377 aa28.03■■■□□ 2.08
CLN5-219ENST00000637537 FBLN2P98095 1184 aa27.99■■■□□ 2.07
CLN5-219ENST00000637537 GRIN2AQ12879 1464 aa27.98■■■□□ 2.07
CLN5-219ENST00000637537 CHMP7Q8WUX9 453 aaPredicted RBP27.96■■■□□ 2.07
CLN5-219ENST00000637537 LRRIQ1Q96JM4 1722 aa27.96■■■□□ 2.07
CLN5-219ENST00000637537 MAGI1Q96QZ7 1491 aaPredicted RBP27.92■■■□□ 2.06
CLN5-219ENST00000637537 KIAA0586Q9BVV6 1533 aa27.9■■■□□ 2.06
CLN5-219ENST00000637537 FAM50AQ14320 339 aaKnown RBP27.9■■■□□ 2.06
CLN5-219ENST00000637537 MTUS2Q5JR59 1369 aa27.88■■■□□ 2.05
CLN5-219ENST00000637537 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
CLN5-219ENST00000637537 UGGT2Q9NYU1 1516 aa27.87■■■□□ 2.05
CLN5-219ENST00000637537 ARID3CA6NKF2 412 aa27.86■■■□□ 2.05
CLN5-219ENST00000637537 CEP170Q5SW79 1584 aa27.82■■■□□ 2.04
CLN5-219ENST00000637537 DISP1Q96F81 1524 aa27.81■■■□□ 2.04
CLN5-219ENST00000637537 KIAA0556O60303 1618 aa27.77■■■□□ 2.04
CLN5-219ENST00000637537 DHX57Q6P158 1386 aaKnown RBP27.76■■■□□ 2.03
CLN5-219ENST00000637537 MAGI3Q5TCQ9 1506 aa27.75■■■□□ 2.03
CLN5-219ENST00000637537 HECW1Q76N89 1606 aa27.74■■■□□ 2.03
CLN5-219ENST00000637537 CDK13Q14004 1512 aaKnown RBP27.73■■■□□ 2.03
CLN5-219ENST00000637537 MYT1Q01538 1121 aa27.73■■■□□ 2.03
CLN5-219ENST00000637537 EPRSP07814 1512 aaKnown RBP27.72■■■□□ 2.03
CLN5-219ENST00000637537 NCOA2Q15596 1464 aa27.72■■■□□ 2.03
CLN5-219ENST00000637537 CCDC18Q5T9S5 1454 aa27.7■■■□□ 2.03
CLN5-219ENST00000637537 FGD6Q6ZV73 1430 aa27.7■■■□□ 2.02
CLN5-219ENST00000637537 RAB3GAP2Q9H2M9 1393 aa27.69■■■□□ 2.02
CLN5-219ENST00000637537 NUP160Q12769 1436 aa27.69■■■□□ 2.02
CLN5-219ENST00000637537 EHBP1L1Q8N3D4 1523 aa27.68■■■□□ 2.02
CLN5-219ENST00000637537 JPH4Q96JJ6 628 aa27.67■■■□□ 2.02
CLN5-219ENST00000637537 SUPT6HQ7KZ85 1726 aaKnown RBP27.66■■■□□ 2.02
CLN5-219ENST00000637537 ACIN1Q9UKV3 1341 aaKnown RBP27.64■■■□□ 2.02
CLN5-219ENST00000637537 MYOM3Q5VTT5 1437 aa27.61■■■□□ 2.01
CLN5-219ENST00000637537 SETD5Q9C0A6 1442 aa27.6■■■□□ 2.01
CLN5-219ENST00000637537 NUP153P49790 1475 aaKnown RBP27.59■■■□□ 2.01
CLN5-219ENST00000637537 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.57■■■□□ 2
CLN5-219ENST00000637537 RAPGEF6Q8TEU7 1601 aa27.57■■■□□ 2
CLN5-219ENST00000637537 PLB1Q6P1J6 1458 aa27.56■■■□□ 2
CLN5-219ENST00000637537 ARHGEF11O15085 1522 aa27.55■■■□□ 2
CLN5-219ENST00000637537 CLSPNQ9HAW4 1339 aa27.54■■■□□ 2
CLN5-219ENST00000637537 CARMIL2Q6F5E8 1435 aa27.54■■■□□ 2
CLN5-219ENST00000637537 PTPRKQ15262 1439 aa27.52■■■□□ 2
CLN5-219ENST00000637537 NEUROD1Q13562 356 aa27.5■■□□□ 1.99
CLN5-219ENST00000637537 CHD1O14646 1710 aa27.48■■□□□ 1.99
CLN5-219ENST00000637537 PTPN23Q9H3S7 1636 aa27.48■■□□□ 1.99
CLN5-219ENST00000637537 MAPKBP1O60336 1514 aa27.42■■□□□ 1.98
CLN5-219ENST00000637537 PRG4Q92954 1404 aaPredicted RBP27.42■■□□□ 1.98
CLN5-219ENST00000637537 ZNF316A6NFI3 1004 aaPredicted RBP27.41■■□□□ 1.98
CLN5-219ENST00000637537 CDK11AQ9UQ88 783 aaPredicted RBP27.4■■□□□ 1.98
CLN5-219ENST00000637537 CHIC2Q9UKJ5 165 aa27.39■■□□□ 1.98
CLN5-219ENST00000637537 DIEXFQ68CQ4 756 aaKnown RBP27.37■■□□□ 1.97
CLN5-219ENST00000637537 TCOF1Q13428 1488 aaKnown RBP27.35■■□□□ 1.97
CLN5-219ENST00000637537 HFM1A2PYH4 1435 aa27.34■■□□□ 1.97
CLN5-219ENST00000637537 RRP7BPQ9NSQ0 103 aa27.33■■□□□ 1.97
CLN5-219ENST00000637537 MIA2Q96PC5 1412 aa27.32■■□□□ 1.96
CLN5-219ENST00000637537 ZNF644Q9H582 1327 aaPredicted RBP27.32■■□□□ 1.96
CLN5-219ENST00000637537 GTF3C3Q9Y5Q9 886 aa27.31■■□□□ 1.96
CLN5-219ENST00000637537 TROQ12816 1431 aaPredicted RBP27.31■■□□□ 1.96
CLN5-219ENST00000637537 NAIPQ13075 1403 aa27.31■■□□□ 1.96
CLN5-219ENST00000637537 ABCA8O94911 1581 aa27.3■■□□□ 1.96
CLN5-219ENST00000637537 SIN3AQ96ST3 1273 aa27.3■■□□□ 1.96
CLN5-219ENST00000637537 PTPRGP23470 1445 aa27.29■■□□□ 1.96
CLN5-219ENST00000637537 CENPBP07199 599 aaPredicted RBP27.28■■□□□ 1.96
CLN5-219ENST00000637537 KIF14Q15058 1648 aa27.26■■□□□ 1.95
CLN5-219ENST00000637537 ATP10BO94823 1461 aa27.25■■□□□ 1.95
CLN5-219ENST00000637537 ERCC6L2Q5T890 1561 aa27.22■■□□□ 1.95
CLN5-219ENST00000637537 PLEKHD1A6NEE1 506 aa27.21■■□□□ 1.95
CLN5-219ENST00000637537 CFDP1Q9UEE9 299 aaPredicted RBP27.19■■□□□ 1.94
CLN5-219ENST00000637537 SHROOM2Q13796 1616 aa27.19■■□□□ 1.94
CLN5-219ENST00000637537 ZNF777Q9ULD5 760 aaPredicted RBP27.19■■□□□ 1.94
CLN5-219ENST00000637537 GPATCH8Q9UKJ3 1502 aaKnown RBP27.16■■□□□ 1.94
CLN5-219ENST00000637537 UACAQ9BZF9 1416 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms