RNA–Protein interactions for RNA: ENST00000637180.1

POLR1D-221, Transcript of RNA polymerase I and III subunit D, humanhuman

TSL 5 BASIC

Gene POLR1D, Length 2,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1D-221ENST00000637180 CCNB3Q8WWL7 1395 aa26.56■■□□□ 1.84
POLR1D-221ENST00000637180 PCF11O94913 1555 aaKnown RBP26.53■■□□□ 1.84
POLR1D-221ENST00000637180 TDRD9Q8NDG6 1382 aaKnown RBP26.52■■□□□ 1.84
POLR1D-221ENST00000637180 GAPVD1Q14C86 1478 aa26.52■■□□□ 1.84
POLR1D-221ENST00000637180 CFAP43Q8NDM7 1665 aa26.51■■□□□ 1.83
POLR1D-221ENST00000637180 LRRC9Q6ZRR7 1453 aa26.51■■□□□ 1.83
POLR1D-221ENST00000637180 P3H3Q8IVL6 736 aa26.51■■□□□ 1.83
POLR1D-221ENST00000637180 DIEXFQ68CQ4 756 aaKnown RBP26.5■■□□□ 1.83
POLR1D-221ENST00000637180 FHOD3Q2V2M9 1422 aa26.49■■□□□ 1.83
POLR1D-221ENST00000637180 ZNF316A6NFI3 1004 aaPredicted RBP26.45■■□□□ 1.82
POLR1D-221ENST00000637180 CLSPNQ9HAW4 1339 aa26.45■■□□□ 1.82
POLR1D-221ENST00000637180 DHX57Q6P158 1386 aaKnown RBP26.44■■□□□ 1.82
POLR1D-221ENST00000637180 TARBP1Q13395 1621 aaKnown RBP26.44■■□□□ 1.82
POLR1D-221ENST00000637180 FYCO1Q9BQS8 1478 aa26.44■■□□□ 1.82
POLR1D-221ENST00000637180 AQRO60306 1485 aaKnown RBP eCLIP26.41■■□□□ 1.823e-6■■□□□ 11.4
POLR1D-221ENST00000637180 CASKIN1Q8WXD9 1431 aa26.4■■□□□ 1.82
POLR1D-221ENST00000637180 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
POLR1D-221ENST00000637180 FMN1Q68DA7 1419 aa26.36■■□□□ 1.81
POLR1D-221ENST00000637180 PHLDB1Q86UU1 1377 aa26.35■■□□□ 1.81
POLR1D-221ENST00000637180 SAMD9Q5K651 1589 aa26.34■■□□□ 1.81
POLR1D-221ENST00000637180 ITGAEP38570 1179 aa26.34■■□□□ 1.81
POLR1D-221ENST00000637180 MRC2Q9UBG0 1479 aa26.32■■□□□ 1.8
POLR1D-221ENST00000637180 PBRM1Q86U86 1689 aa26.32■■□□□ 1.8
POLR1D-221ENST00000637180 SNAPC4Q5SXM2 1469 aa26.29■■□□□ 1.8
POLR1D-221ENST00000637180 RAB3GAP2Q9H2M9 1393 aa26.22■■□□□ 1.79
POLR1D-221ENST00000637180 FAM50AQ14320 339 aaKnown RBP26.21■■□□□ 1.79
POLR1D-221ENST00000637180 ADAMTS12P58397 1594 aa26.19■■□□□ 1.78
POLR1D-221ENST00000637180 LRRIQ1Q96JM4 1722 aa26.17■■□□□ 1.78
POLR1D-221ENST00000637180 SETD5Q9C0A6 1442 aa26.17■■□□□ 1.78
POLR1D-221ENST00000637180 GRIN2BQ13224 1484 aa26.16■■□□□ 1.78
POLR1D-221ENST00000637180 THOC2Q8NI27 1593 aaKnown RBP26.16■■□□□ 1.78
POLR1D-221ENST00000637180 WDR62O43379 1518 aa26.14■■□□□ 1.77
POLR1D-221ENST00000637180 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.77
POLR1D-221ENST00000637180 MTUS2Q5JR59 1369 aa26.13■■□□□ 1.77
POLR1D-221ENST00000637180 IFT140Q96RY7 1462 aa26.13■■□□□ 1.77
POLR1D-221ENST00000637180 IQGAP2Q13576 1575 aa26.11■■□□□ 1.77
POLR1D-221ENST00000637180 FGD6Q6ZV73 1430 aa26.08■■□□□ 1.76
POLR1D-221ENST00000637180 MAPKBP1O60336 1514 aa26.07■■□□□ 1.76
POLR1D-221ENST00000637180 ZNF608Q9ULD9 1512 aaPredicted RBP26.06■■□□□ 1.76
POLR1D-221ENST00000637180 EHBP1L1Q8N3D4 1523 aa26.03■■□□□ 1.76
POLR1D-221ENST00000637180 SUPT6HQ7KZ85 1726 aaKnown RBP26.03■■□□□ 1.76
POLR1D-221ENST00000637180 SCAF1Q9H7N4 1312 aaKnown RBP26.01■■□□□ 1.75
POLR1D-221ENST00000637180 NCOA2Q15596 1464 aa26.01■■□□□ 1.75
POLR1D-221ENST00000637180 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
POLR1D-221ENST00000637180 ACIN1Q9UKV3 1341 aaKnown RBP25.99■■□□□ 1.75
POLR1D-221ENST00000637180 HECW1Q76N89 1606 aa25.99■■□□□ 1.75
POLR1D-221ENST00000637180 CENPBP07199 599 aaPredicted RBP25.98■■□□□ 1.75
POLR1D-221ENST00000637180 MYOM3Q5VTT5 1437 aa25.96■■□□□ 1.75
POLR1D-221ENST00000637180 UGGT2Q9NYU1 1516 aa25.96■■□□□ 1.75
POLR1D-221ENST00000637180 ERCC6Q03468 1493 aa25.96■■□□□ 1.75
POLR1D-221ENST00000637180 NEUROD1Q13562 356 aa25.95■■□□□ 1.74
POLR1D-221ENST00000637180 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.74
POLR1D-221ENST00000637180 MIER1Q8N108 512 aa25.94■■□□□ 1.74
POLR1D-221ENST00000637180 MAGI3Q5TCQ9 1506 aa25.93■■□□□ 1.74
POLR1D-221ENST00000637180 ARHGEF11O15085 1522 aa25.91■■□□□ 1.74
POLR1D-221ENST00000637180 EPRSP07814 1512 aaKnown RBP25.89■■□□□ 1.74
POLR1D-221ENST00000637180 KIAA0586Q9BVV6 1533 aa25.89■■□□□ 1.73
POLR1D-221ENST00000637180 PTPN23Q9H3S7 1636 aa25.86■■□□□ 1.73
POLR1D-221ENST00000637180 GRIN2AQ12879 1464 aa25.86■■□□□ 1.73
POLR1D-221ENST00000637180 PTPRKQ15262 1439 aa25.85■■□□□ 1.73
POLR1D-221ENST00000637180 HFM1A2PYH4 1435 aa25.84■■□□□ 1.73
POLR1D-221ENST00000637180 KIAA0556O60303 1618 aa25.84■■□□□ 1.73
POLR1D-221ENST00000637180 CDK13Q14004 1512 aaKnown RBP25.82■■□□□ 1.72
POLR1D-221ENST00000637180 DISP1Q96F81 1524 aa25.81■■□□□ 1.72
POLR1D-221ENST00000637180 MAGI1Q96QZ7 1491 aaPredicted RBP25.81■■□□□ 1.72
POLR1D-221ENST00000637180 SIN3AQ96ST3 1273 aa25.8■■□□□ 1.72
POLR1D-221ENST00000637180 TCOF1Q13428 1488 aaKnown RBP25.77■■□□□ 1.72
POLR1D-221ENST00000637180 NAIPQ13075 1403 aa25.75■■□□□ 1.71
POLR1D-221ENST00000637180 TIMELESSQ9UNS1 1208 aa25.75■■□□□ 1.71
POLR1D-221ENST00000637180 YTHDC1Q96MU7 727 aaKnown RBP25.74■■□□□ 1.71
POLR1D-221ENST00000637180 UACAQ9BZF9 1416 aa25.73■■□□□ 1.71
POLR1D-221ENST00000637180 SYNJ2O15056 1496 aa25.73■■□□□ 1.71
POLR1D-221ENST00000637180 ARID3CA6NKF2 412 aa25.71■■□□□ 1.71
POLR1D-221ENST00000637180 RAPGEF6Q8TEU7 1601 aa25.71■■□□□ 1.71
POLR1D-221ENST00000637180 MIA2Q96PC5 1412 aa25.7■■□□□ 1.71
POLR1D-221ENST00000637180 CHMP7Q8WUX9 453 aaPredicted RBP25.7■■□□□ 1.7
POLR1D-221ENST00000637180 CEP170Q5SW79 1584 aa25.7■■□□□ 1.7
POLR1D-221ENST00000637180 NUP153P49790 1475 aaKnown RBP25.68■■□□□ 1.7
POLR1D-221ENST00000637180 GCC2Q8IWJ2 1684 aa25.66■■□□□ 1.7
POLR1D-221ENST00000637180 GTF3C3Q9Y5Q9 886 aa25.63■■□□□ 1.69
POLR1D-221ENST00000637180 AKNAQ7Z591 1439 aa25.62■■□□□ 1.69
POLR1D-221ENST00000637180 FBLN2P98095 1184 aa25.61■■□□□ 1.69
POLR1D-221ENST00000637180 CHIC2Q9UKJ5 165 aa25.6■■□□□ 1.69
POLR1D-221ENST00000637180 PPP1R15AO75807 674 aaPredicted RBP25.59■■□□□ 1.69
POLR1D-221ENST00000637180 RRP7BPQ9NSQ0 103 aa25.59■■□□□ 1.69
POLR1D-221ENST00000637180 NUP160Q12769 1436 aa25.59■■□□□ 1.69
POLR1D-221ENST00000637180 CDK11AQ9UQ88 783 aaPredicted RBP25.58■■□□□ 1.69
POLR1D-221ENST00000637180 TONSLQ96HA7 1378 aa25.56■■□□□ 1.68
POLR1D-221ENST00000637180 CARMIL2Q6F5E8 1435 aa25.54■■□□□ 1.68
POLR1D-221ENST00000637180 PLB1Q6P1J6 1458 aa25.52■■□□□ 1.68
POLR1D-221ENST00000637180 JPH4Q96JJ6 628 aa25.51■■□□□ 1.67
POLR1D-221ENST00000637180 KDM6BO15054 1643 aa25.5■■□□□ 1.67
POLR1D-221ENST00000637180 DNMT1P26358 1616 aaKnown RBP25.5■■□□□ 1.67
POLR1D-221ENST00000637180 DAPK1P53355 1430 aa25.49■■□□□ 1.67
POLR1D-221ENST00000637180 TROQ12816 1431 aaPredicted RBP25.49■■□□□ 1.67
POLR1D-221ENST00000637180 PRG4Q92954 1404 aaPredicted RBP25.46■■□□□ 1.67
POLR1D-221ENST00000637180 TRIM52Q96A61 297 aa25.45■■□□□ 1.66
POLR1D-221ENST00000637180 ROCK1Q13464 1354 aa25.45■■□□□ 1.66
POLR1D-221ENST00000637180 ITSN2Q9NZM3 1697 aa25.44■■□□□ 1.66
POLR1D-221ENST00000637180 ABCC5O15440 1437 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms