RNA–Protein interactions for RNA: ENST00000637168.1

CACNA1A-237, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 2,979 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-237ENST00000637168 KANK4Q5T7N3 995 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-237ENST00000637168 SALL2Q9Y467 1007 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-237ENST00000637168 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
CACNA1A-237ENST00000637168 SYNJ1O43426 1573 aa13.88□□□□□ -0.19
CACNA1A-237ENST00000637168 ARAP1Q96P48 1450 aa13.87□□□□□ -0.19
CACNA1A-237ENST00000637168 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
CACNA1A-237ENST00000637168 NBR1Q14596 966 aa13.86□□□□□ -0.19
CACNA1A-237ENST00000637168 IRX6P78412 446 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-237ENST00000637168 RTL5Q5HYW3 569 aaPredicted RBP13.85□□□□□ -0.19
CACNA1A-237ENST00000637168 RANGAP1P46060 587 aaPredicted RBP13.83□□□□□ -0.19
CACNA1A-237ENST00000637168 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.19
CACNA1A-237ENST00000637168 UBE2Q2Q8WVN8 375 aa13.82□□□□□ -0.2
CACNA1A-237ENST00000637168 ERICH3Q5RHP9 1530 aa13.82□□□□□ -0.2
CACNA1A-237ENST00000637168 SETD5Q9C0A6 1442 aa13.81□□□□□ -0.2
CACNA1A-237ENST00000637168 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
CACNA1A-237ENST00000637168 PLPPR3Q6T4P5 718 aa13.78□□□□□ -0.2
CACNA1A-237ENST00000637168 SIN3AQ96ST3 1273 aa13.77□□□□□ -0.21
CACNA1A-237ENST00000637168 ANP32AP39687 249 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-237ENST00000637168 IPO9Q96P70 1041 aaKnown RBP13.76□□□□□ -0.21
CACNA1A-237ENST00000637168 IL27Q8NEV9 243 aa13.74□□□□□ -0.21
CACNA1A-237ENST00000637168 HIRIP3Q9BW71 556 aaPredicted RBP13.74□□□□□ -0.21
CACNA1A-237ENST00000637168 KCNA4P22459 653 aa13.74□□□□□ -0.21
CACNA1A-237ENST00000637168 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
CACNA1A-237ENST00000637168 CCDC136Q96JN2 1154 aa13.74□□□□□ -0.21
CACNA1A-237ENST00000637168 PRXQ9BXM0 1461 aa13.73□□□□□ -0.21
CACNA1A-237ENST00000637168 ZBTB47Q9UFB7 747 aaPredicted RBP13.73□□□□□ -0.21
CACNA1A-237ENST00000637168 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
CACNA1A-237ENST00000637168 MAP3K1Q13233 1512 aa13.68□□□□□ -0.22
CACNA1A-237ENST00000637168 USP35Q9P2H5 1018 aa13.68□□□□□ -0.22
CACNA1A-237ENST00000637168 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
CACNA1A-237ENST00000637168 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
CACNA1A-237ENST00000637168 TOP2BQ02880 1626 aa13.66□□□□□ -0.22
CACNA1A-237ENST00000637168 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.65□□□□□ -0.22
CACNA1A-237ENST00000637168 TONSLQ96HA7 1378 aa13.65□□□□□ -0.22
CACNA1A-237ENST00000637168 ZBED9Q6R2W3 1325 aa13.65□□□□□ -0.22
CACNA1A-237ENST00000637168 FHAD1B1AJZ9 1412 aa13.63□□□□□ -0.23
CACNA1A-237ENST00000637168 TIAM1Q13009 1591 aa13.63□□□□□ -0.23
CACNA1A-237ENST00000637168 WASHC2CQ9Y4E1 1318 aa13.63□□□□□ -0.23
CACNA1A-237ENST00000637168 ARHGAP35Q9NRY4 1499 aa13.63□□□□□ -0.23
CACNA1A-237ENST00000637168 PEG3Q9GZU2 1588 aa13.61□□□□□ -0.23
CACNA1A-237ENST00000637168 NCAPD3P42695 1498 aa13.6□□□□□ -0.23
CACNA1A-237ENST00000637168 BIVM-ERCC5R4GMW8 1640 aa13.59□□□□□ -0.23
CACNA1A-237ENST00000637168 LRRC9Q6ZRR7 1453 aa13.57□□□□□ -0.24
CACNA1A-237ENST00000637168 NEFMP07197 916 aa13.56□□□□□ -0.24
CACNA1A-237ENST00000637168 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
CACNA1A-237ENST00000637168 FAM50AQ14320 339 aaKnown RBP13.56□□□□□ -0.24
CACNA1A-237ENST00000637168 NCOA2Q15596 1464 aa13.56□□□□□ -0.24
CACNA1A-237ENST00000637168 PPM1GO15355 546 aaPredicted RBP13.56□□□□□ -0.24
CACNA1A-237ENST00000637168 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
CACNA1A-237ENST00000637168 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
CACNA1A-237ENST00000637168 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.54□□□□□ -0.24
CACNA1A-237ENST00000637168 RNF123Q5XPI4 1314 aa13.53□□□□□ -0.24
CACNA1A-237ENST00000637168 FAM9BQ8IZU0 186 aa13.53□□□□□ -0.24
CACNA1A-237ENST00000637168 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
CACNA1A-237ENST00000637168 PRKRIP1Q9H875 184 aaPredicted RBP13.51□□□□□ -0.25
CACNA1A-237ENST00000637168 MRS2Q9HD23 443 aa13.51□□□□□ -0.25
CACNA1A-237ENST00000637168 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
CACNA1A-237ENST00000637168 EIF5BO60841 1220 aaKnown RBP13.49□□□□□ -0.25
CACNA1A-237ENST00000637168 UACAQ9BZF9 1416 aa13.49□□□□□ -0.25
CACNA1A-237ENST00000637168 HSPA5P11021 654 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-237ENST00000637168 LAS1LQ9Y4W2 734 aaKnown RBP13.48□□□□□ -0.25
CACNA1A-237ENST00000637168 KDM5BQ9UGL1 1544 aa13.48□□□□□ -0.25
CACNA1A-237ENST00000637168 CFAP43Q8NDM7 1665 aa13.48□□□□□ -0.25
CACNA1A-237ENST00000637168 NUDCQ9Y266 331 aa13.47□□□□□ -0.25
CACNA1A-237ENST00000637168 AKNAQ7Z591 1439 aa13.47□□□□□ -0.25
CACNA1A-237ENST00000637168 GSE1Q14687 1217 aa13.47□□□□□ -0.25
CACNA1A-237ENST00000637168 RSPH6AQ9H0K4 717 aa13.47□□□□□ -0.25
CACNA1A-237ENST00000637168 TCERG1O14776 1098 aaKnown RBP13.46□□□□□ -0.25
CACNA1A-237ENST00000637168 BRPF3Q9ULD4 1205 aa13.46□□□□□ -0.25
CACNA1A-237ENST00000637168 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.25
CACNA1A-237ENST00000637168 EIF4G2P78344 907 aaKnown RBP eCLIP13.45□□□□□ -0.26
CACNA1A-237ENST00000637168 UNC13AQ9UPW8 1703 aa13.45□□□□□ -0.26
CACNA1A-237ENST00000637168 NPM2Q86SE8 214 aaKnown RBP13.44□□□□□ -0.26
CACNA1A-237ENST00000637168 ADRA2BP18089 450 aa13.44□□□□□ -0.26
CACNA1A-237ENST00000637168 HFM1A2PYH4 1435 aa13.42□□□□□ -0.26
CACNA1A-237ENST00000637168 NCOA1Q15788 1441 aa13.42□□□□□ -0.26
CACNA1A-237ENST00000637168 MS4A1P11836 297 aa13.41□□□□□ -0.26
CACNA1A-237ENST00000637168 CCDC7Q96M83 1385 aa13.41□□□□□ -0.26
CACNA1A-237ENST00000637168 DDRGK1Q96HY6 314 aa13.41□□□□□ -0.26
CACNA1A-237ENST00000637168 PKNOX2Q96KN3 472 aa13.41□□□□□ -0.26
CACNA1A-237ENST00000637168 PDE4AP27815 886 aa13.41□□□□□ -0.26
CACNA1A-237ENST00000637168 BACH2Q9BYV9 841 aa13.39□□□□□ -0.27
CACNA1A-237ENST00000637168 FAM43AQ8N2R8 423 aa13.39□□□□□ -0.27
CACNA1A-237ENST00000637168 PTPN23Q9H3S7 1636 aa13.39□□□□□ -0.27
CACNA1A-237ENST00000637168 ATAD2BQ9ULI0 1458 aa13.38□□□□□ -0.27
CACNA1A-237ENST00000637168 GLIPR1L2Q4G1C9 344 aa13.36□□□□□ -0.27
CACNA1A-237ENST00000637168 ABCA5Q8WWZ7 1642 aa13.36□□□□□ -0.27
CACNA1A-237ENST00000637168 PCF11O94913 1555 aaKnown RBP13.35□□□□□ -0.27
CACNA1A-237ENST00000637168 FGD6Q6ZV73 1430 aa13.35□□□□□ -0.27
CACNA1A-237ENST00000637168 CUX1P39880 1505 aa13.35□□□□□ -0.27
CACNA1A-237ENST00000637168 NFKBIBQ15653 356 aa13.35□□□□□ -0.27
CACNA1A-237ENST00000637168 FRAT1Q92837 279 aaPredicted RBP13.35□□□□□ -0.27
CACNA1A-237ENST00000637168 FMN1Q68DA7 1419 aa13.34□□□□□ -0.27
CACNA1A-237ENST00000637168 NAIPQ13075 1403 aa13.32□□□□□ -0.28
CACNA1A-237ENST00000637168 POLR1AO95602 1720 aaPredicted RBP13.32□□□□□ -0.28
CACNA1A-237ENST00000637168 FYCO1Q9BQS8 1478 aa13.31□□□□□ -0.28
CACNA1A-237ENST00000637168 AQRO60306 1485 aaKnown RBP eCLIP13.3□□□□□ -0.28
CACNA1A-237ENST00000637168 PTPRKQ15262 1439 aa13.29□□□□□ -0.28
CACNA1A-237ENST00000637168 RRP1P56182 461 aaKnown RBP13.29□□□□□ -0.28
CACNA1A-237ENST00000637168 KIF7Q2M1P5 1343 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms