RNA–Protein interactions for RNA: ENST00000637156.1

CLN8-213, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,897 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-213ENST00000637156 GRIN2AQ12879 1464 aa33.43■■■□□ 2.94
CLN8-213ENST00000637156 ARHGAP35Q9NRY4 1499 aa33.33■■■□□ 2.93
CLN8-213ENST00000637156 CTTNBP2Q8WZ74 1663 aa33.32■■■□□ 2.93
CLN8-213ENST00000637156 ARAP1Q96P48 1450 aa33.26■■■□□ 2.92
CLN8-213ENST00000637156 KIAA0586Q9BVV6 1533 aa33.25■■■□□ 2.91
CLN8-213ENST00000637156 P3H3Q8IVL6 736 aa33.23■■■□□ 2.91
CLN8-213ENST00000637156 NUP160Q12769 1436 aa33.23■■■□□ 2.91
CLN8-213ENST00000637156 CEP170Q5SW79 1584 aa33.2■■■□□ 2.91
CLN8-213ENST00000637156 VPS8Q8N3P4 1428 aa33.19■■■□□ 2.9
CLN8-213ENST00000637156 IQGAP2Q13576 1575 aa33.18■■■□□ 2.9
CLN8-213ENST00000637156 EFCAB5A4FU69 1503 aa33.11■■■□□ 2.89
CLN8-213ENST00000637156 CHD1O14646 1710 aa33.09■■■□□ 2.89
CLN8-213ENST00000637156 JPH4Q96JJ6 628 aa33.08■■■□□ 2.89
CLN8-213ENST00000637156 FHOD3Q2V2M9 1422 aa33.08■■■□□ 2.89
CLN8-213ENST00000637156 UGGT2Q9NYU1 1516 aa33.06■■■□□ 2.88
CLN8-213ENST00000637156 SAMD9Q5K651 1589 aa33.06■■■□□ 2.88
CLN8-213ENST00000637156 PPARGC1BQ86YN6 1023 aaKnown RBP33.03■■■□□ 2.88
CLN8-213ENST00000637156 DISP1Q96F81 1524 aa32.96■■■□□ 2.87
CLN8-213ENST00000637156 APLP2Q06481 763 aa32.89■■■□□ 2.86
CLN8-213ENST00000637156 FMN1Q68DA7 1419 aa32.89■■■□□ 2.86
CLN8-213ENST00000637156 KIAA0556O60303 1618 aa32.84■■■□□ 2.85
CLN8-213ENST00000637156 CARMIL2Q6F5E8 1435 aa32.82■■■□□ 2.85
CLN8-213ENST00000637156 ATP1B4Q9UN42 357 aaPredicted RBP32.81■■■□□ 2.84
CLN8-213ENST00000637156 CASKIN1Q8WXD9 1431 aa32.81■■■□□ 2.84
CLN8-213ENST00000637156 PRG4Q92954 1404 aaPredicted RBP32.81■■■□□ 2.84
CLN8-213ENST00000637156 OSCARQ8IYS5 282 aa32.79■■■□□ 2.84
CLN8-213ENST00000637156 CLASP1Q7Z460 1538 aa32.79■■■□□ 2.84
CLN8-213ENST00000637156 TTBK1Q5TCY1 1321 aaPredicted RBP32.78■■■□□ 2.84
CLN8-213ENST00000637156 PCF11O94913 1555 aaKnown RBP32.75■■■□□ 2.83
CLN8-213ENST00000637156 KANK4Q5T7N3 995 aaPredicted RBP32.74■■■□□ 2.83
CLN8-213ENST00000637156 SHROOM2Q13796 1616 aa32.73■■■□□ 2.83
CLN8-213ENST00000637156 FYCO1Q9BQS8 1478 aa32.73■■■□□ 2.83
CLN8-213ENST00000637156 TRIM26Q12899 539 aaPredicted RBP32.69■■■□□ 2.82
CLN8-213ENST00000637156 MAP3K1Q13233 1512 aa32.64■■■□□ 2.82
CLN8-213ENST00000637156 PCGF6Q9BYE7 350 aa32.63■■■□□ 2.81
CLN8-213ENST00000637156 ERCC6L2Q5T890 1561 aa32.61■■■□□ 2.81
CLN8-213ENST00000637156 TIAM1Q13009 1591 aa32.59■■■□□ 2.81
CLN8-213ENST00000637156 PTPRGP23470 1445 aa32.59■■■□□ 2.81
CLN8-213ENST00000637156 PLB1Q6P1J6 1458 aa32.56■■■□□ 2.8
CLN8-213ENST00000637156 LRRC9Q6ZRR7 1453 aa32.51■■■□□ 2.8
CLN8-213ENST00000637156 ARID3CA6NKF2 412 aa32.51■■■□□ 2.79
CLN8-213ENST00000637156 LRRIQ1Q96JM4 1722 aa32.49■■■□□ 2.79
CLN8-213ENST00000637156 EPRSP07814 1512 aaKnown RBP32.49■■■□□ 2.79
CLN8-213ENST00000637156 HECW1Q76N89 1606 aa32.48■■■□□ 2.79
CLN8-213ENST00000637156 RAPGEF6Q8TEU7 1601 aa32.48■■■□□ 2.79
CLN8-213ENST00000637156 NUP153P49790 1475 aaKnown RBP32.48■■■□□ 2.79
CLN8-213ENST00000637156 CFAP43Q8NDM7 1665 aa32.45■■■□□ 2.79
CLN8-213ENST00000637156 CCDC18Q5T9S5 1454 aa32.43■■■□□ 2.78
CLN8-213ENST00000637156 ABCA8O94911 1581 aa32.43■■■□□ 2.78
CLN8-213ENST00000637156 CDK13Q14004 1512 aaKnown RBP32.4■■■□□ 2.78
CLN8-213ENST00000637156 UACAQ9BZF9 1416 aa32.37■■■□□ 2.77
CLN8-213ENST00000637156 MTUS2Q5JR59 1369 aa32.37■■■□□ 2.77
CLN8-213ENST00000637156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.36■■■□□ 2.77
CLN8-213ENST00000637156 HNRNPUL2Q1KMD3 747 aaKnown RBP32.36■■■□□ 2.77
CLN8-213ENST00000637156 MAGI3Q5TCQ9 1506 aa32.31■■■□□ 2.76
CLN8-213ENST00000637156 ATP10BO94823 1461 aa32.31■■■□□ 2.76
CLN8-213ENST00000637156 CDK11AQ9UQ88 783 aaPredicted RBP32.28■■■□□ 2.76
CLN8-213ENST00000637156 PHLDB1Q86UU1 1377 aa32.25■■■□□ 2.75
CLN8-213ENST00000637156 ABCC2Q92887 1545 aa32.21■■■□□ 2.75
CLN8-213ENST00000637156 EHBP1L1Q8N3D4 1523 aa32.21■■■□□ 2.75
CLN8-213ENST00000637156 UHRF1BP1LA0JNW5 1464 aa32.18■■■□□ 2.74
CLN8-213ENST00000637156 PLEKHD1A6NEE1 506 aa32.18■■■□□ 2.74
CLN8-213ENST00000637156 NCOA2Q15596 1464 aa32.16■■■□□ 2.74
CLN8-213ENST00000637156 RRBP1Q9P2E9 1410 aaKnown RBP32.16■■■□□ 2.74
CLN8-213ENST00000637156 TROQ12816 1431 aaPredicted RBP32.13■■■□□ 2.73
CLN8-213ENST00000637156 ARHGEF11O15085 1522 aa32.13■■■□□ 2.73
CLN8-213ENST00000637156 SUPT6HQ7KZ85 1726 aaKnown RBP32.1■■■□□ 2.73
CLN8-213ENST00000637156 CCNB3Q8WWL7 1395 aa32.09■■■□□ 2.73
CLN8-213ENST00000637156 KDM5BQ9UGL1 1544 aa32.08■■■□□ 2.73
CLN8-213ENST00000637156 ADCY10Q96PN6 1610 aa32.04■■■□□ 2.72
CLN8-213ENST00000637156 MYOM3Q5VTT5 1437 aa32.01■■■□□ 2.71
CLN8-213ENST00000637156 FGD6Q6ZV73 1430 aa31.98■■■□□ 2.71
CLN8-213ENST00000637156 CYB5RLQ6IPT4 315 aa31.98■■■□□ 2.71
CLN8-213ENST00000637156 FAM50AQ14320 339 aaKnown RBP31.97■■■□□ 2.71
CLN8-213ENST00000637156 ZCCHC11Q5TAX3 1644 aaKnown RBP31.96■■■□□ 2.71
CLN8-213ENST00000637156 RIMBP3CA6NJZ7 1639 aa31.94■■■□□ 2.7
CLN8-213ENST00000637156 RIMBP3BA6NNM3 1639 aa31.94■■■□□ 2.7
CLN8-213ENST00000637156 RIMBP3Q9UFD9 1639 aa31.94■■■□□ 2.7
CLN8-213ENST00000637156 KIF14Q15058 1648 aa31.93■■■□□ 2.7
CLN8-213ENST00000637156 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.9■■■□□ 2.7
CLN8-213ENST00000637156 KCNH8Q96L42 1107 aa31.9■■■□□ 2.7
CLN8-213ENST00000637156 NPM1P06748 294 aaKnown RBP eCLIP31.89■■■□□ 2.69
CLN8-213ENST00000637156 ITGAEP38570 1179 aa31.89■■■□□ 2.69
CLN8-213ENST00000637156 ABCC10Q5T3U5 1492 aa31.88■■■□□ 2.69
CLN8-213ENST00000637156 MIA2Q96PC5 1412 aa31.87■■■□□ 2.69
CLN8-213ENST00000637156 GPATCH8Q9UKJ3 1502 aaKnown RBP31.86■■■□□ 2.69
CLN8-213ENST00000637156 CFDP1Q9UEE9 299 aaPredicted RBP31.82■■■□□ 2.68
CLN8-213ENST00000637156 ZNF644Q9H582 1327 aaPredicted RBP31.79■■■□□ 2.68
CLN8-213ENST00000637156 PTPN23Q9H3S7 1636 aa31.78■■■□□ 2.68
CLN8-213ENST00000637156 TCOF1Q13428 1488 aaKnown RBP31.78■■■□□ 2.68
CLN8-213ENST00000637156 ASXL2Q76L83 1435 aa31.77■■■□□ 2.68
CLN8-213ENST00000637156 WDR7Q9Y4E6 1490 aa31.75■■■□□ 2.67
CLN8-213ENST00000637156 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.75■■■□□ 2.675e-6■□□□□ 9.5
CLN8-213ENST00000637156 ZNF777Q9ULD5 760 aaPredicted RBP31.72■■■□□ 2.67
CLN8-213ENST00000637156 PTPRKQ15262 1439 aa31.68■■■□□ 2.66
CLN8-213ENST00000637156 CDC42BPAQ5VT25 1732 aa31.67■■■□□ 2.66
CLN8-213ENST00000637156 TTC37Q6PGP7 1564 aa31.67■■■□□ 2.66
CLN8-213ENST00000637156 ITSN2Q9NZM3 1697 aa31.66■■■□□ 2.66
CLN8-213ENST00000637156 PLCH2O75038 1416 aa31.6■■■□□ 2.65
CLN8-213ENST00000637156 CAMSAP2Q08AD1 1489 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms