RNA–Protein interactions for RNA: ENST00000636945.2

SCN8A-212, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 3,578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-212ENST00000636945 WDR97A6NE52 1622 aa11.01□□□□□ -0.65
SCN8A-212ENST00000636945 MYT1LQ9UL68 1186 aa11.01□□□□□ -0.65
SCN8A-212ENST00000636945 BCANQ96GW7 911 aa11.01□□□□□ -0.65
SCN8A-212ENST00000636945 CCNB3Q8WWL7 1395 aa11□□□□□ -0.65
SCN8A-212ENST00000636945 PRKCSHP14314 528 aaPredicted RBP11□□□□□ -0.65
SCN8A-212ENST00000636945 MAP3K1Q13233 1512 aa11□□□□□ -0.65
SCN8A-212ENST00000636945 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
SCN8A-212ENST00000636945 TIMELESSQ9UNS1 1208 aa10.97□□□□□ -0.65
SCN8A-212ENST00000636945 RAB3GAP2Q9H2M9 1393 aa10.96□□□□□ -0.65
SCN8A-212ENST00000636945 CFTRP13569 1480 aa10.96□□□□□ -0.66
SCN8A-212ENST00000636945 NEFLP07196 543 aa10.95□□□□□ -0.66
SCN8A-212ENST00000636945 ERICH6BQ5W0A0 696 aa10.93□□□□□ -0.66
SCN8A-212ENST00000636945 FANCD2Q9BXW9 1451 aa10.91□□□□□ -0.66
SCN8A-212ENST00000636945 SETD5Q9C0A6 1442 aa10.91□□□□□ -0.66
SCN8A-212ENST00000636945 ARHGAP35Q9NRY4 1499 aa10.91□□□□□ -0.66
SCN8A-212ENST00000636945 DDX10Q13206 875 aaKnown RBP10.9□□□□□ -0.66
SCN8A-212ENST00000636945 ITGAEP38570 1179 aa10.9□□□□□ -0.67
SCN8A-212ENST00000636945 TIAM1Q13009 1591 aa10.89□□□□□ -0.67
SCN8A-212ENST00000636945 KIF21AQ7Z4S6 1674 aa10.88□□□□□ -0.67
SCN8A-212ENST00000636945 MRC2Q9UBG0 1479 aa10.87□□□□□ -0.67
SCN8A-212ENST00000636945 THOC2Q8NI27 1593 aaKnown RBP10.85□□□□□ -0.67
SCN8A-212ENST00000636945 CDK11AQ9UQ88 783 aaPredicted RBP10.85□□□□□ -0.67
SCN8A-212ENST00000636945 DEKP35659 375 aaKnown RBP10.84□□□□□ -0.67
SCN8A-212ENST00000636945 TRIM52Q96A61 297 aa10.84□□□□□ -0.67
SCN8A-212ENST00000636945 ANP32CO43423 234 aa10.84□□□□□ -0.67
SCN8A-212ENST00000636945 CFAP43Q8NDM7 1665 aa10.84□□□□□ -0.67
SCN8A-212ENST00000636945 KDM5BQ9UGL1 1544 aa10.84□□□□□ -0.67
SCN8A-212ENST00000636945 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.83□□□□□ -0.68
SCN8A-212ENST00000636945 LRRC9Q6ZRR7 1453 aa10.82□□□□□ -0.68
SCN8A-212ENST00000636945 ERICH6Q7L0X2 663 aa10.81□□□□□ -0.68
SCN8A-212ENST00000636945 WDR62O43379 1518 aa10.8□□□□□ -0.68
SCN8A-212ENST00000636945 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
SCN8A-212ENST00000636945 PPP4R2Q9NY27 417 aa10.8□□□□□ -0.68
SCN8A-212ENST00000636945 PHLDB1Q86UU1 1377 aa10.79□□□□□ -0.68
SCN8A-212ENST00000636945 FHAD1B1AJZ9 1412 aa10.78□□□□□ -0.68
SCN8A-212ENST00000636945 CUX1P39880 1505 aa10.78□□□□□ -0.68
SCN8A-212ENST00000636945 NCOA2Q15596 1464 aa10.78□□□□□ -0.68
SCN8A-212ENST00000636945 URB2Q14146 1524 aaKnown RBP10.78□□□□□ -0.68
SCN8A-212ENST00000636945 PRDM2Q13029 1718 aa10.77□□□□□ -0.69
SCN8A-212ENST00000636945 KIF27Q86VH2 1401 aa10.77□□□□□ -0.69
SCN8A-212ENST00000636945 NOP58Q9Y2X3 529 aaKnown RBP10.73□□□□□ -0.69
SCN8A-212ENST00000636945 TOPBP1Q92547 1522 aa10.72□□□□□ -0.69
SCN8A-212ENST00000636945 RANGAP1P46060 587 aaPredicted RBP10.72□□□□□ -0.69
SCN8A-212ENST00000636945 UACAQ9BZF9 1416 aa10.7□□□□□ -0.7
SCN8A-212ENST00000636945 HNRNPUQ00839 825 aaKnown RBP eCLIP10.7□□□□□ -0.7
SCN8A-212ENST00000636945 PCF11O94913 1555 aaKnown RBP10.7□□□□□ -0.7
SCN8A-212ENST00000636945 PAK3O75914 559 aaPredicted RBP10.7□□□□□ -0.7
SCN8A-212ENST00000636945 DNMBPQ6XZF7 1577 aa10.69□□□□□ -0.7
SCN8A-212ENST00000636945 ANO8Q9HCE9 1232 aaPredicted RBP10.69□□□□□ -0.7
SCN8A-212ENST00000636945 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
SCN8A-212ENST00000636945 HFM1A2PYH4 1435 aa10.69□□□□□ -0.7
SCN8A-212ENST00000636945 HIRIP3Q9BW71 556 aaPredicted RBP10.68□□□□□ -0.7
SCN8A-212ENST00000636945 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
SCN8A-212ENST00000636945 PTPN23Q9H3S7 1636 aa10.68□□□□□ -0.7
SCN8A-212ENST00000636945 WASHC2AQ641Q2 1341 aa10.68□□□□□ -0.7
SCN8A-212ENST00000636945 ZBED9Q6R2W3 1325 aa10.68□□□□□ -0.7
SCN8A-212ENST00000636945 AQRO60306 1485 aaKnown RBP eCLIP10.68□□□□□ -0.7
SCN8A-212ENST00000636945 IRX6P78412 446 aaPredicted RBP10.67□□□□□ -0.7
SCN8A-212ENST00000636945 IFT140Q96RY7 1462 aa10.67□□□□□ -0.7
SCN8A-212ENST00000636945 CNTLNQ9NXG0 1405 aa10.67□□□□□ -0.7
SCN8A-212ENST00000636945 POLR1AO95602 1720 aaPredicted RBP10.66□□□□□ -0.7
SCN8A-212ENST00000636945 CCDC18Q5T9S5 1454 aa10.66□□□□□ -0.7
SCN8A-212ENST00000636945 FYCO1Q9BQS8 1478 aa10.66□□□□□ -0.7
SCN8A-212ENST00000636945 IGF1RP08069 1367 aa10.65□□□□□ -0.7
SCN8A-212ENST00000636945 TONSLQ96HA7 1378 aa10.65□□□□□ -0.7
SCN8A-212ENST00000636945 IPO9Q96P70 1041 aaKnown RBP10.64□□□□□ -0.71
SCN8A-212ENST00000636945 SMG6Q86US8 1419 aaKnown RBP10.64□□□□□ -0.71
SCN8A-212ENST00000636945 NCOA1Q15788 1441 aa10.63□□□□□ -0.71
SCN8A-212ENST00000636945 DENND4BO75064 1496 aaPredicted RBP10.63□□□□□ -0.71
SCN8A-212ENST00000636945 POLA1P09884 1462 aaPredicted RBP10.63□□□□□ -0.71
SCN8A-212ENST00000636945 DNAJC5Q9H3Z4 198 aa10.63□□□□□ -0.71
SCN8A-212ENST00000636945 C11orf95C9JLR9 678 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-212ENST00000636945 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
SCN8A-212ENST00000636945 PTPRKQ15262 1439 aa10.62□□□□□ -0.71
SCN8A-212ENST00000636945 B4GALNT3Q6L9W6 998 aa10.62□□□□□ -0.71
SCN8A-212ENST00000636945 FGD6Q6ZV73 1430 aa10.62□□□□□ -0.71
SCN8A-212ENST00000636945 HECW1Q76N89 1606 aa10.62□□□□□ -0.71
SCN8A-212ENST00000636945 FGD5Q6ZNL6 1462 aa10.61□□□□□ -0.71
SCN8A-212ENST00000636945 CCDC184Q52MB2 194 aa10.61□□□□□ -0.71
SCN8A-212ENST00000636945 NAIPQ13075 1403 aa10.61□□□□□ -0.71
SCN8A-212ENST00000636945 CASKIN1Q8WXD9 1431 aa10.61□□□□□ -0.71
SCN8A-212ENST00000636945 EFCAB5A4FU69 1503 aa10.61□□□□□ -0.71
SCN8A-212ENST00000636945 ZNF608Q9ULD9 1512 aaPredicted RBP10.61□□□□□ -0.71
SCN8A-212ENST00000636945 WASHC2CQ9Y4E1 1318 aa10.6□□□□□ -0.71
SCN8A-212ENST00000636945 RAD54L2Q9Y4B4 1467 aa10.6□□□□□ -0.71
SCN8A-212ENST00000636945 PRKRIP1Q9H875 184 aaPredicted RBP10.59□□□□□ -0.71
SCN8A-212ENST00000636945 GCC2Q8IWJ2 1684 aa10.58□□□□□ -0.72
SCN8A-212ENST00000636945 NBR1Q14596 966 aa10.58□□□□□ -0.72
SCN8A-212ENST00000636945 TDRD9Q8NDG6 1382 aaKnown RBP10.58□□□□□ -0.72
SCN8A-212ENST00000636945 FAM50AQ14320 339 aaKnown RBP10.57□□□□□ -0.72
SCN8A-212ENST00000636945 USP35Q9P2H5 1018 aa10.57□□□□□ -0.72
SCN8A-212ENST00000636945 HSPA5P11021 654 aaKnown RBP10.57□□□□□ -0.72
SCN8A-212ENST00000636945 UBE2Q2Q8WVN8 375 aa10.57□□□□□ -0.72
SCN8A-212ENST00000636945 CCDC7Q96M83 1385 aa10.57□□□□□ -0.72
SCN8A-212ENST00000636945 SPATA31E1Q6ZUB1 1445 aa10.57□□□□□ -0.72
SCN8A-212ENST00000636945 TARBP1Q13395 1621 aaKnown RBP10.56□□□□□ -0.72
SCN8A-212ENST00000636945 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
SCN8A-212ENST00000636945 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
SCN8A-212ENST00000636945 CARMIL1Q5VZK9 1371 aa10.56□□□□□ -0.72
SCN8A-212ENST00000636945 AKNAQ7Z591 1439 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms