RNA–Protein interactions for RNA: ENST00000636721.1

CACNB4-231, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5 BASIC

Gene CACNB4, Length 1,542 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-231	ENST00000636721	CLSPN	Q9HAW4	1339 aa		14.17	□□□□□ -0.14
CACNB4-231	ENST00000636721	RRBP1	Q9P2E9	1410 aa	Known RBP	14.16	□□□□□ -0.14
CACNB4-231	ENST00000636721	NES	P48681	1621 aa		14.15	□□□□□ -0.14
CACNB4-231	ENST00000636721	RANGAP1	P46060	587 aa	Predicted RBP	14.15	□□□□□ -0.14
CACNB4-231	ENST00000636721	TIAM1	Q13009	1591 aa		14.13	□□□□□ -0.15
CACNB4-231	ENST00000636721	RAD54L2	Q9Y4B4	1467 aa		14.11	□□□□□ -0.15
CACNB4-231	ENST00000636721	URB2	Q14146	1524 aa	Known RBP	14.11	□□□□□ -0.15
CACNB4-231	ENST00000636721	HNRNPUL2	Q1KMD3	747 aa	Known RBP	14.11	□□□□□ -0.15
CACNB4-231	ENST00000636721	ABCA5	Q8WWZ7	1642 aa		14.11	□□□□□ -0.15
CACNB4-231	ENST00000636721	CFAP43	Q8NDM7	1665 aa		14.11	□□□□□ -0.15
CACNB4-231	ENST00000636721	AQR	O60306	1485 aa	Known RBP eCLIP	14.09	□□□□□ -0.15
CACNB4-231	ENST00000636721	KIF21A	Q7Z4S6	1674 aa		14.08	□□□□□ -0.15
CACNB4-231	ENST00000636721	CCNB3	Q8WWL7	1395 aa		14.06	□□□□□ -0.16
CACNB4-231	ENST00000636721	KANK4	Q5T7N3	995 aa	Predicted RBP	14.06	□□□□□ -0.16
CACNB4-231	ENST00000636721	FYCO1	Q9BQS8	1478 aa		14.06	□□□□□ -0.16
CACNB4-231	ENST00000636721	GAPVD1	Q14C86	1478 aa		14.04	□□□□□ -0.16
CACNB4-231	ENST00000636721	LRRC9	Q6ZRR7	1453 aa		14.04	□□□□□ -0.16
CACNB4-231	ENST00000636721	FMN1	Q68DA7	1419 aa		14.03	□□□□□ -0.16
CACNB4-231	ENST00000636721	CASKIN1	Q8WXD9	1431 aa		14.02	□□□□□ -0.17
CACNB4-231	ENST00000636721	TARBP1	Q13395	1621 aa	Known RBP	14.02	□□□□□ -0.17
CACNB4-231	ENST00000636721	PCF11	O94913	1555 aa	Known RBP	14.02	□□□□□ -0.17
CACNB4-231	ENST00000636721	ZNF316	A6NFI3	1004 aa	Predicted RBP	14.01	□□□□□ -0.17
CACNB4-231	ENST00000636721	SAMD9	Q5K651	1589 aa		14	□□□□□ -0.17
CACNB4-231	ENST00000636721	DIEXF	Q68CQ4	756 aa	Known RBP	13.99	□□□□□ -0.17
CACNB4-231	ENST00000636721	THOC2	Q8NI27	1593 aa	Known RBP	13.98	□□□□□ -0.17
CACNB4-231	ENST00000636721	PBRM1	Q86U86	1689 aa		13.98	□□□□□ -0.17
CACNB4-231	ENST00000636721	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
CACNB4-231	ENST00000636721	MRC2	Q9UBG0	1479 aa		13.96	□□□□□ -0.17
CACNB4-231	ENST00000636721	DHX57	Q6P158	1386 aa	Known RBP	13.96	□□□□□ -0.17
CACNB4-231	ENST00000636721	FHOD3	Q2V2M9	1422 aa		13.94	□□□□□ -0.18
CACNB4-231	ENST00000636721	TDRD9	Q8NDG6	1382 aa	Known RBP	13.93	□□□□□ -0.18
CACNB4-231	ENST00000636721	SNAPC4	Q5SXM2	1469 aa		13.9	□□□□□ -0.18
CACNB4-231	ENST00000636721	IFT140	Q96RY7	1462 aa		13.89	□□□□□ -0.19
CACNB4-231	ENST00000636721	ADAMTS12	P58397	1594 aa		13.89	□□□□□ -0.19
CACNB4-231	ENST00000636721	SETD5	Q9C0A6	1442 aa		13.88	□□□□□ -0.19
CACNB4-231	ENST00000636721	WDR62	O43379	1518 aa		13.88	□□□□□ -0.19
CACNB4-231	ENST00000636721	GRIN2B	Q13224	1484 aa		13.88	□□□□□ -0.19
CACNB4-231	ENST00000636721	PHLDB1	Q86UU1	1377 aa		13.87	□□□□□ -0.19
CACNB4-231	ENST00000636721	CCDC18	Q5T9S5	1454 aa		13.86	□□□□□ -0.19
CACNB4-231	ENST00000636721	IQGAP2	Q13576	1575 aa		13.86	□□□□□ -0.19
CACNB4-231	ENST00000636721	SUPT6H	Q7KZ85	1726 aa	Known RBP	13.85	□□□□□ -0.19
CACNB4-231	ENST00000636721	P3H3	Q8IVL6	736 aa		13.85	□□□□□ -0.19
CACNB4-231	ENST00000636721	EHBP1L1	Q8N3D4	1523 aa		13.85	□□□□□ -0.19
CACNB4-231	ENST00000636721	RAB3GAP2	Q9H2M9	1393 aa		13.84	□□□□□ -0.19
CACNB4-231	ENST00000636721	CENPB	P07199	599 aa	Predicted RBP	13.84	□□□□□ -0.19
CACNB4-231	ENST00000636721	HECW1	Q76N89	1606 aa		13.83	□□□□□ -0.19
CACNB4-231	ENST00000636721	LRRIQ1	Q96JM4	1722 aa		13.83	□□□□□ -0.2
CACNB4-231	ENST00000636721	DNAJC5	Q9H3Z4	198 aa		13.83	□□□□□ -0.2
CACNB4-231	ENST00000636721	MTUS2	Q5JR59	1369 aa		13.82	□□□□□ -0.2
CACNB4-231	ENST00000636721	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.81	□□□□□ -0.2
CACNB4-231	ENST00000636721	TIMELESS	Q9UNS1	1208 aa		13.81	□□□□□ -0.2
CACNB4-231	ENST00000636721	UGGT2	Q9NYU1	1516 aa		13.81	□□□□□ -0.2
CACNB4-231	ENST00000636721	FGD6	Q6ZV73	1430 aa		13.8	□□□□□ -0.2
CACNB4-231	ENST00000636721	FAM50A	Q14320	339 aa	Known RBP	13.78	□□□□□ -0.2
CACNB4-231	ENST00000636721	MYOM3	Q5VTT5	1437 aa		13.76	□□□□□ -0.21
CACNB4-231	ENST00000636721	ITGAE	P38570	1179 aa		13.76	□□□□□ -0.21
CACNB4-231	ENST00000636721	ACIN1	Q9UKV3	1341 aa	Known RBP	13.76	□□□□□ -0.21
CACNB4-231	ENST00000636721	ARHGEF11	O15085	1522 aa		13.76	□□□□□ -0.21
CACNB4-231	ENST00000636721	MAPKBP1	O60336	1514 aa		13.76	□□□□□ -0.21
CACNB4-231	ENST00000636721	KIAA0586	Q9BVV6	1533 aa		13.76	□□□□□ -0.21
CACNB4-231	ENST00000636721	NCOA2	Q15596	1464 aa		13.75	□□□□□ -0.21
CACNB4-231	ENST00000636721	MAGI1	Q96QZ7	1491 aa	Predicted RBP	13.73	□□□□□ -0.21
CACNB4-231	ENST00000636721	EIF4G3	O43432	1585 aa	Known RBP	13.73	□□□□□ -0.21
CACNB4-231	ENST00000636721	PTPN23	Q9H3S7	1636 aa		13.72	□□□□□ -0.21
CACNB4-231	ENST00000636721	HFM1	A2PYH4	1435 aa		13.71	□□□□□ -0.21
CACNB4-231	ENST00000636721	TCOF1	Q13428	1488 aa	Known RBP	13.71	□□□□□ -0.21
CACNB4-231	ENST00000636721	EPRS	P07814	1512 aa	Known RBP	13.71	□□□□□ -0.22
CACNB4-231	ENST00000636721	MIA2	Q96PC5	1412 aa		13.7	□□□□□ -0.22
CACNB4-231	ENST00000636721	ERCC6	Q03468	1493 aa		13.7	□□□□□ -0.22
CACNB4-231	ENST00000636721	KIAA0556	O60303	1618 aa		13.7	□□□□□ -0.22
CACNB4-231	ENST00000636721	GRIN2A	Q12879	1464 aa		13.7	□□□□□ -0.22
CACNB4-231	ENST00000636721	AKNA	Q7Z591	1439 aa		13.68	□□□□□ -0.22
CACNB4-231	ENST00000636721	ZNF608	Q9ULD9	1512 aa	Predicted RBP	13.68	□□□□□ -0.22
CACNB4-231	ENST00000636721	GCC2	Q8IWJ2	1684 aa		13.67	□□□□□ -0.22
CACNB4-231	ENST00000636721	UACA	Q9BZF9	1416 aa		13.67	□□□□□ -0.22
CACNB4-231	ENST00000636721	SYNJ2	O15056	1496 aa		13.65	□□□□□ -0.22
CACNB4-231	ENST00000636721	MAGI3	Q5TCQ9	1506 aa		13.64	□□□□□ -0.23
CACNB4-231	ENST00000636721	RAPGEF6	Q8TEU7	1601 aa		13.64	□□□□□ -0.23
CACNB4-231	ENST00000636721	DISP1	Q96F81	1524 aa		13.64	□□□□□ -0.23
CACNB4-231	ENST00000636721	SCAF1	Q9H7N4	1312 aa	Known RBP	13.64	□□□□□ -0.23
CACNB4-231	ENST00000636721	MIER1	Q8N108	512 aa		13.63	□□□□□ -0.23
CACNB4-231	ENST00000636721	CDK11A	Q9UQ88	783 aa	Predicted RBP	13.63	□□□□□ -0.23
CACNB4-231	ENST00000636721	NAIP	Q13075	1403 aa		13.62	□□□□□ -0.23
CACNB4-231	ENST00000636721	NEUROD1	Q13562	356 aa		13.62	□□□□□ -0.23
CACNB4-231	ENST00000636721	CARMIL2	Q6F5E8	1435 aa		13.59	□□□□□ -0.23
CACNB4-231	ENST00000636721	PTPRK	Q15262	1439 aa		13.58	□□□□□ -0.23
CACNB4-231	ENST00000636721	CDK13	Q14004	1512 aa	Known RBP	13.58	□□□□□ -0.24
CACNB4-231	ENST00000636721	ITSN2	Q9NZM3	1697 aa		13.58	□□□□□ -0.24
CACNB4-231	ENST00000636721	NUP160	Q12769	1436 aa		13.58	□□□□□ -0.24
CACNB4-231	ENST00000636721	CEP170	Q5SW79	1584 aa		13.57	□□□□□ -0.24
CACNB4-231	ENST00000636721	CHMP7	Q8WUX9	453 aa	Predicted RBP	13.57	□□□□□ -0.24
CACNB4-231	ENST00000636721	ADCY10	Q96PN6	1610 aa		13.57	□□□□□ -0.24
CACNB4-231	ENST00000636721	ROCK1	Q13464	1354 aa		13.56	□□□□□ -0.24
CACNB4-231	ENST00000636721	NUP153	P49790	1475 aa	Known RBP	13.56	□□□□□ -0.24
CACNB4-231	ENST00000636721	DNMT1	P26358	1616 aa	Known RBP	13.55	□□□□□ -0.24
CACNB4-231	ENST00000636721	PPP1R15A	O75807	674 aa	Predicted RBP	13.55	□□□□□ -0.24
CACNB4-231	ENST00000636721	TONSL	Q96HA7	1378 aa		13.54	□□□□□ -0.24
CACNB4-231	ENST00000636721	TRO	Q12816	1431 aa	Predicted RBP	13.52	□□□□□ -0.24
CACNB4-231	ENST00000636721	SIN3A	Q96ST3	1273 aa		13.52	□□□□□ -0.25
CACNB4-231	ENST00000636721	PELP1	Q8IZL8	1130 aa	Known RBP	13.5	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 232.2 ms