RNA–Protein interactions for RNA: ENST00000636690.1

GABRB3-221, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5

Gene GABRB3, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-221ENST00000636690 FMN1Q68DA7 1419 aa10.52□□□□□ -0.73
GABRB3-221ENST00000636690 CCNB3Q8WWL7 1395 aa10.52□□□□□ -0.73
GABRB3-221ENST00000636690 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.52□□□□□ -0.73
GABRB3-221ENST00000636690 CASKIN1Q8WXD9 1431 aa10.51□□□□□ -0.73
GABRB3-221ENST00000636690 KIF21AQ7Z4S6 1674 aa10.51□□□□□ -0.73
GABRB3-221ENST00000636690 GAPVD1Q14C86 1478 aa10.51□□□□□ -0.73
GABRB3-221ENST00000636690 LRRC9Q6ZRR7 1453 aa10.5□□□□□ -0.73
GABRB3-221ENST00000636690 TARBP1Q13395 1621 aaKnown RBP10.5□□□□□ -0.73
GABRB3-221ENST00000636690 SAMD9Q5K651 1589 aa10.49□□□□□ -0.73
GABRB3-221ENST00000636690 MRC2Q9UBG0 1479 aa10.49□□□□□ -0.73
GABRB3-221ENST00000636690 PCF11O94913 1555 aaKnown RBP10.47□□□□□ -0.73
GABRB3-221ENST00000636690 KANK4Q5T7N3 995 aaPredicted RBP10.46□□□□□ -0.73
GABRB3-221ENST00000636690 TTBK1Q5TCY1 1321 aaPredicted RBP10.46□□□□□ -0.73
GABRB3-221ENST00000636690 WDR62O43379 1518 aa10.43□□□□□ -0.74
GABRB3-221ENST00000636690 SNAPC4Q5SXM2 1469 aa10.43□□□□□ -0.74
GABRB3-221ENST00000636690 IFT140Q96RY7 1462 aa10.43□□□□□ -0.74
GABRB3-221ENST00000636690 HNRNPUL2Q1KMD3 747 aaKnown RBP10.43□□□□□ -0.74
GABRB3-221ENST00000636690 DHX57Q6P158 1386 aaKnown RBP10.42□□□□□ -0.74
GABRB3-221ENST00000636690 PBRM1Q86U86 1689 aa10.42□□□□□ -0.74
GABRB3-221ENST00000636690 RANGAP1P46060 587 aaPredicted RBP10.42□□□□□ -0.74
GABRB3-221ENST00000636690 ADAMTS12P58397 1594 aa10.41□□□□□ -0.74
GABRB3-221ENST00000636690 GRIN2BQ13224 1484 aa10.41□□□□□ -0.74
GABRB3-221ENST00000636690 FHOD3Q2V2M9 1422 aa10.41□□□□□ -0.74
GABRB3-221ENST00000636690 ZNF316A6NFI3 1004 aaPredicted RBP10.4□□□□□ -0.74
GABRB3-221ENST00000636690 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
GABRB3-221ENST00000636690 TDRD9Q8NDG6 1382 aaKnown RBP10.39□□□□□ -0.75
GABRB3-221ENST00000636690 IQGAP2Q13576 1575 aa10.38□□□□□ -0.75
GABRB3-221ENST00000636690 EHBP1L1Q8N3D4 1523 aa10.38□□□□□ -0.75
GABRB3-221ENST00000636690 DIEXFQ68CQ4 756 aaKnown RBP10.37□□□□□ -0.75
GABRB3-221ENST00000636690 UGGT2Q9NYU1 1516 aa10.37□□□□□ -0.75
GABRB3-221ENST00000636690 PHLDB1Q86UU1 1377 aa10.37□□□□□ -0.75
GABRB3-221ENST00000636690 SETD5Q9C0A6 1442 aa10.36□□□□□ -0.75
GABRB3-221ENST00000636690 HECW1Q76N89 1606 aa10.36□□□□□ -0.75
GABRB3-221ENST00000636690 ACIN1Q9UKV3 1341 aaKnown RBP10.35□□□□□ -0.75
GABRB3-221ENST00000636690 TIMELESSQ9UNS1 1208 aa10.35□□□□□ -0.75
GABRB3-221ENST00000636690 ARHGEF11O15085 1522 aa10.34□□□□□ -0.75
GABRB3-221ENST00000636690 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
GABRB3-221ENST00000636690 SUPT6HQ7KZ85 1726 aaKnown RBP10.33□□□□□ -0.76
GABRB3-221ENST00000636690 KIAA0586Q9BVV6 1533 aa10.33□□□□□ -0.76
GABRB3-221ENST00000636690 MAGI1Q96QZ7 1491 aaPredicted RBP10.32□□□□□ -0.76
GABRB3-221ENST00000636690 RAB3GAP2Q9H2M9 1393 aa10.32□□□□□ -0.76
GABRB3-221ENST00000636690 MTUS2Q5JR59 1369 aa10.31□□□□□ -0.76
GABRB3-221ENST00000636690 MYOM3Q5VTT5 1437 aa10.31□□□□□ -0.76
GABRB3-221ENST00000636690 AKNAQ7Z591 1439 aa10.31□□□□□ -0.76
GABRB3-221ENST00000636690 TCOF1Q13428 1488 aaKnown RBP10.3□□□□□ -0.76
GABRB3-221ENST00000636690 HFM1A2PYH4 1435 aa10.29□□□□□ -0.76
GABRB3-221ENST00000636690 MIA2Q96PC5 1412 aa10.29□□□□□ -0.76
GABRB3-221ENST00000636690 MAPKBP1O60336 1514 aa10.28□□□□□ -0.76
GABRB3-221ENST00000636690 NCOA2Q15596 1464 aa10.28□□□□□ -0.76
GABRB3-221ENST00000636690 CENPBP07199 599 aaPredicted RBP10.27□□□□□ -0.77
GABRB3-221ENST00000636690 DNAJC5BQ9UF47 199 aa10.27□□□□□ -0.77
GABRB3-221ENST00000636690 GRIN2AQ12879 1464 aa10.27□□□□□ -0.77
GABRB3-221ENST00000636690 LRRIQ1Q96JM4 1722 aa10.27□□□□□ -0.77
GABRB3-221ENST00000636690 EIF4G3O43432 1585 aaKnown RBP10.26□□□□□ -0.77
GABRB3-221ENST00000636690 KIAA0556O60303 1618 aa10.26□□□□□ -0.77
GABRB3-221ENST00000636690 EPRSP07814 1512 aaKnown RBP10.26□□□□□ -0.77
GABRB3-221ENST00000636690 PHF23Q9BUL5 403 aaPredicted RBP10.25□□□□□ -0.77
GABRB3-221ENST00000636690 SYNJ2O15056 1496 aa10.24□□□□□ -0.77
GABRB3-221ENST00000636690 P3H3Q8IVL6 736 aa10.24□□□□□ -0.77
GABRB3-221ENST00000636690 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
GABRB3-221ENST00000636690 PTPN23Q9H3S7 1636 aa10.23□□□□□ -0.77
GABRB3-221ENST00000636690 UACAQ9BZF9 1416 aa10.23□□□□□ -0.77
GABRB3-221ENST00000636690 ZNF608Q9ULD9 1512 aaPredicted RBP10.23□□□□□ -0.77
GABRB3-221ENST00000636690 FAM50AQ14320 339 aaKnown RBP10.22□□□□□ -0.77
GABRB3-221ENST00000636690 NUP160Q12769 1436 aa10.22□□□□□ -0.77
GABRB3-221ENST00000636690 DISP1Q96F81 1524 aa10.22□□□□□ -0.77
GABRB3-221ENST00000636690 GCC2Q8IWJ2 1684 aa10.21□□□□□ -0.78
GABRB3-221ENST00000636690 RAPGEF6Q8TEU7 1601 aa10.19□□□□□ -0.78
GABRB3-221ENST00000636690 MAGI3Q5TCQ9 1506 aa10.19□□□□□ -0.78
GABRB3-221ENST00000636690 NAIPQ13075 1403 aa10.19□□□□□ -0.78
GABRB3-221ENST00000636690 ATP1B4Q9UN42 357 aaPredicted RBP10.19□□□□□ -0.78
GABRB3-221ENST00000636690 CARMIL2Q6F5E8 1435 aa10.18□□□□□ -0.78
GABRB3-221ENST00000636690 ROCK1Q13464 1354 aa10.18□□□□□ -0.78
GABRB3-221ENST00000636690 CDK11AQ9UQ88 783 aaPredicted RBP10.18□□□□□ -0.78
GABRB3-221ENST00000636690 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
GABRB3-221ENST00000636690 ADCY10Q96PN6 1610 aa10.16□□□□□ -0.78
GABRB3-221ENST00000636690 CEP170Q5SW79 1584 aa10.15□□□□□ -0.78
GABRB3-221ENST00000636690 ITGAEP38570 1179 aa10.15□□□□□ -0.78
GABRB3-221ENST00000636690 PTPRKQ15262 1439 aa10.15□□□□□ -0.79
GABRB3-221ENST00000636690 ITSN2Q9NZM3 1697 aa10.14□□□□□ -0.79
GABRB3-221ENST00000636690 TROQ12816 1431 aaPredicted RBP10.14□□□□□ -0.79
GABRB3-221ENST00000636690 CDK13Q14004 1512 aaKnown RBP10.13□□□□□ -0.79
GABRB3-221ENST00000636690 DNMT1P26358 1616 aaKnown RBP10.13□□□□□ -0.79
GABRB3-221ENST00000636690 CHMP7Q8WUX9 453 aaPredicted RBP10.11□□□□□ -0.79
GABRB3-221ENST00000636690 ABCA8O94911 1581 aa10.09□□□□□ -0.79
GABRB3-221ENST00000636690 DAPK1P53355 1430 aa10.09□□□□□ -0.79
GABRB3-221ENST00000636690 PPP1R15AO75807 674 aaPredicted RBP10.09□□□□□ -0.79
GABRB3-221ENST00000636690 ADGRL2O95490 1459 aa10.09□□□□□ -0.79
GABRB3-221ENST00000636690 SCAF1Q9H7N4 1312 aaKnown RBP10.08□□□□□ -0.8
GABRB3-221ENST00000636690 MIER1Q8N108 512 aa10.08□□□□□ -0.8
GABRB3-221ENST00000636690 TONSLQ96HA7 1378 aa10.08□□□□□ -0.8
GABRB3-221ENST00000636690 SHANK2Q9UPX8 1470 aa10.07□□□□□ -0.8
GABRB3-221ENST00000636690 NEUROD1Q13562 356 aa10.07□□□□□ -0.8
GABRB3-221ENST00000636690 ADGBQ8N7X0 1667 aa10.06□□□□□ -0.8
GABRB3-221ENST00000636690 PELP1Q8IZL8 1130 aaKnown RBP10.05□□□□□ -0.8
GABRB3-221ENST00000636690 JPH4Q96JJ6 628 aa10.05□□□□□ -0.8
GABRB3-221ENST00000636690 ABCC5O15440 1437 aa10.05□□□□□ -0.8
GABRB3-221ENST00000636690 KIF14Q15058 1648 aa10.04□□□□□ -0.8
GABRB3-221ENST00000636690 GPATCH8Q9UKJ3 1502 aaKnown RBP10.04□□□□□ -0.8
GABRB3-221ENST00000636690 CROCC2H7BZ55 1655 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms