RNA–Protein interactions for RNA: ENST00000636475.1

PCCA-213, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 5

Gene PCCA, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-213ENST00000636475 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
PCCA-213ENST00000636475 TIAM1Q13009 1591 aa14.97□□□□□ -0.01
PCCA-213ENST00000636475 ABCA5Q8WWZ7 1642 aa14.96□□□□□ -0.01
PCCA-213ENST00000636475 KANK4Q5T7N3 995 aaPredicted RBP14.94□□□□□ -0.02
PCCA-213ENST00000636475 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
PCCA-213ENST00000636475 MRC2Q9UBG0 1479 aa14.93□□□□□ -0.02
PCCA-213ENST00000636475 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
PCCA-213ENST00000636475 WDR62O43379 1518 aa14.91□□□□□ -0.02
PCCA-213ENST00000636475 AQRO60306 1485 aaKnown RBP eCLIP14.89□□□□□ -0.03
PCCA-213ENST00000636475 CCNB3Q8WWL7 1395 aa14.89□□□□□ -0.03
PCCA-213ENST00000636475 PCF11O94913 1555 aaKnown RBP14.88□□□□□ -0.03
PCCA-213ENST00000636475 GAPVD1Q14C86 1478 aa14.88□□□□□ -0.03
PCCA-213ENST00000636475 LRRC9Q6ZRR7 1453 aa14.88□□□□□ -0.03
PCCA-213ENST00000636475 FYCO1Q9BQS8 1478 aa14.88□□□□□ -0.03
PCCA-213ENST00000636475 TARBP1Q13395 1621 aaKnown RBP14.86□□□□□ -0.03
PCCA-213ENST00000636475 CASKIN1Q8WXD9 1431 aa14.84□□□□□ -0.03
PCCA-213ENST00000636475 FMN1Q68DA7 1419 aa14.83□□□□□ -0.03
PCCA-213ENST00000636475 SAMD9Q5K651 1589 aa14.83□□□□□ -0.04
PCCA-213ENST00000636475 ZNF316A6NFI3 1004 aaPredicted RBP14.82□□□□□ -0.04
PCCA-213ENST00000636475 DHX57Q6P158 1386 aaKnown RBP14.81□□□□□ -0.04
PCCA-213ENST00000636475 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
PCCA-213ENST00000636475 PBRM1Q86U86 1689 aa14.81□□□□□ -0.04
PCCA-213ENST00000636475 FHOD3Q2V2M9 1422 aa14.8□□□□□ -0.04
PCCA-213ENST00000636475 TDRD9Q8NDG6 1382 aaKnown RBP14.8□□□□□ -0.04
PCCA-213ENST00000636475 SNAPC4Q5SXM2 1469 aa14.75□□□□□ -0.05
PCCA-213ENST00000636475 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.75□□□□□ -0.05
PCCA-213ENST00000636475 PHLDB1Q86UU1 1377 aa14.74□□□□□ -0.05
PCCA-213ENST00000636475 ADAMTS12P58397 1594 aa14.73□□□□□ -0.05
PCCA-213ENST00000636475 P3H3Q8IVL6 736 aa14.73□□□□□ -0.05
PCCA-213ENST00000636475 IFT140Q96RY7 1462 aa14.7□□□□□ -0.06
PCCA-213ENST00000636475 SETD5Q9C0A6 1442 aa14.69□□□□□ -0.06
PCCA-213ENST00000636475 GRIN2BQ13224 1484 aa14.69□□□□□ -0.06
PCCA-213ENST00000636475 LRRIQ1Q96JM4 1722 aa14.68□□□□□ -0.06
PCCA-213ENST00000636475 IQGAP2Q13576 1575 aa14.67□□□□□ -0.06
PCCA-213ENST00000636475 RAB3GAP2Q9H2M9 1393 aa14.67□□□□□ -0.06
PCCA-213ENST00000636475 ATP1B4Q9UN42 357 aaPredicted RBP14.66□□□□□ -0.06
PCCA-213ENST00000636475 CCDC18Q5T9S5 1454 aa14.65□□□□□ -0.06
PCCA-213ENST00000636475 EHBP1L1Q8N3D4 1523 aa14.65□□□□□ -0.06
PCCA-213ENST00000636475 SUPT6HQ7KZ85 1726 aaKnown RBP14.65□□□□□ -0.06
PCCA-213ENST00000636475 HECW1Q76N89 1606 aa14.64□□□□□ -0.07
PCCA-213ENST00000636475 ITGAEP38570 1179 aa14.64□□□□□ -0.07
PCCA-213ENST00000636475 MTUS2Q5JR59 1369 aa14.63□□□□□ -0.07
PCCA-213ENST00000636475 OSCARQ8IYS5 282 aa14.63□□□□□ -0.07
PCCA-213ENST00000636475 FGD6Q6ZV73 1430 aa14.63□□□□□ -0.07
PCCA-213ENST00000636475 FAM50AQ14320 339 aaKnown RBP14.62□□□□□ -0.07
PCCA-213ENST00000636475 UGGT2Q9NYU1 1516 aa14.61□□□□□ -0.07
PCCA-213ENST00000636475 MAPKBP1O60336 1514 aa14.61□□□□□ -0.07
PCCA-213ENST00000636475 CENPBP07199 599 aaPredicted RBP14.6□□□□□ -0.07
PCCA-213ENST00000636475 NCOA2Q15596 1464 aa14.58□□□□□ -0.08
PCCA-213ENST00000636475 MYOM3Q5VTT5 1437 aa14.58□□□□□ -0.08
PCCA-213ENST00000636475 ARHGEF11O15085 1522 aa14.57□□□□□ -0.08
PCCA-213ENST00000636475 EIF4G3O43432 1585 aaKnown RBP14.57□□□□□ -0.08
PCCA-213ENST00000636475 ACIN1Q9UKV3 1341 aaKnown RBP14.55□□□□□ -0.08
PCCA-213ENST00000636475 KIAA0586Q9BVV6 1533 aa14.55□□□□□ -0.08
PCCA-213ENST00000636475 ZNF608Q9ULD9 1512 aaPredicted RBP14.55□□□□□ -0.08
PCCA-213ENST00000636475 TIMELESSQ9UNS1 1208 aa14.53□□□□□ -0.08
PCCA-213ENST00000636475 EPRSP07814 1512 aaKnown RBP14.53□□□□□ -0.08
PCCA-213ENST00000636475 PTPN23Q9H3S7 1636 aa14.53□□□□□ -0.08
PCCA-213ENST00000636475 MAGI1Q96QZ7 1491 aaPredicted RBP14.53□□□□□ -0.08
PCCA-213ENST00000636475 KIAA0556O60303 1618 aa14.52□□□□□ -0.08
PCCA-213ENST00000636475 HFM1A2PYH4 1435 aa14.52□□□□□ -0.08
PCCA-213ENST00000636475 GRIN2AQ12879 1464 aa14.52□□□□□ -0.09
PCCA-213ENST00000636475 TCOF1Q13428 1488 aaKnown RBP14.51□□□□□ -0.09
PCCA-213ENST00000636475 MAGI3Q5TCQ9 1506 aa14.51□□□□□ -0.09
PCCA-213ENST00000636475 SCAF1Q9H7N4 1312 aaKnown RBP14.5□□□□□ -0.09
PCCA-213ENST00000636475 MIA2Q96PC5 1412 aa14.48□□□□□ -0.09
PCCA-213ENST00000636475 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
PCCA-213ENST00000636475 NEUROD1Q13562 356 aa14.46□□□□□ -0.09
PCCA-213ENST00000636475 MIER1Q8N108 512 aa14.46□□□□□ -0.09
PCCA-213ENST00000636475 SYNJ2O15056 1496 aa14.46□□□□□ -0.09
PCCA-213ENST00000636475 AKNAQ7Z591 1439 aa14.46□□□□□ -0.1
PCCA-213ENST00000636475 UACAQ9BZF9 1416 aa14.46□□□□□ -0.1
PCCA-213ENST00000636475 GCC2Q8IWJ2 1684 aa14.46□□□□□ -0.1
PCCA-213ENST00000636475 RAPGEF6Q8TEU7 1601 aa14.45□□□□□ -0.1
PCCA-213ENST00000636475 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
PCCA-213ENST00000636475 NAIPQ13075 1403 aa14.43□□□□□ -0.1
PCCA-213ENST00000636475 CDK13Q14004 1512 aaKnown RBP14.43□□□□□ -0.1
PCCA-213ENST00000636475 CEP170Q5SW79 1584 aa14.41□□□□□ -0.1
PCCA-213ENST00000636475 RIMBP3CA6NJZ7 1639 aa14.41□□□□□ -0.1
PCCA-213ENST00000636475 RIMBP3BA6NNM3 1639 aa14.41□□□□□ -0.1
PCCA-213ENST00000636475 RIMBP3Q9UFD9 1639 aa14.41□□□□□ -0.1
PCCA-213ENST00000636475 NUP153P49790 1475 aaKnown RBP14.39□□□□□ -0.11
PCCA-213ENST00000636475 NUP160Q12769 1436 aa14.38□□□□□ -0.11
PCCA-213ENST00000636475 CDK11AQ9UQ88 783 aaPredicted RBP14.38□□□□□ -0.11
PCCA-213ENST00000636475 CHMP7Q8WUX9 453 aaPredicted RBP14.37□□□□□ -0.11
PCCA-213ENST00000636475 PELP1Q8IZL8 1130 aaKnown RBP14.36□□□□□ -0.11
PCCA-213ENST00000636475 SIN3AQ96ST3 1273 aa14.36□□□□□ -0.11
PCCA-213ENST00000636475 CARMIL2Q6F5E8 1435 aa14.36□□□□□ -0.11
PCCA-213ENST00000636475 ITSN2Q9NZM3 1697 aa14.35□□□□□ -0.11
PCCA-213ENST00000636475 ADCY10Q96PN6 1610 aa14.34□□□□□ -0.11
PCCA-213ENST00000636475 DNMT1P26358 1616 aaKnown RBP14.34□□□□□ -0.11
PCCA-213ENST00000636475 ROCK1Q13464 1354 aa14.33□□□□□ -0.12
PCCA-213ENST00000636475 PPP1R15AO75807 674 aaPredicted RBP14.33□□□□□ -0.12
PCCA-213ENST00000636475 TONSLQ96HA7 1378 aa14.33□□□□□ -0.12
PCCA-213ENST00000636475 TROQ12816 1431 aaPredicted RBP14.31□□□□□ -0.12
PCCA-213ENST00000636475 YTHDC1Q96MU7 727 aaKnown RBP14.3□□□□□ -0.12
PCCA-213ENST00000636475 GTF3C3Q9Y5Q9 886 aa14.3□□□□□ -0.12
PCCA-213ENST00000636475 DAPK1P53355 1430 aa14.3□□□□□ -0.12
PCCA-213ENST00000636475 CHD1O14646 1710 aa14.29□□□□□ -0.12
PCCA-213ENST00000636475 ABCA8O94911 1581 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms