RNA–Protein interactions for RNA: ENST00000636340.1

GABRA1-213, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

TSL 5

Gene GABRA1, Length 2,239 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-213ENST00000636340 CEP162Q5TB80 1403 aa9.57□□□□□ -0.88
GABRA1-213ENST00000636340 TNIKQ9UKE5 1360 aa9.57□□□□□ -0.88
GABRA1-213ENST00000636340 KLHL34Q8N239 644 aa9.57□□□□□ -0.88
GABRA1-213ENST00000636340 RGL2O15211 777 aa9.56□□□□□ -0.88
GABRA1-213ENST00000636340 EEA1Q15075 1411 aa9.55□□□□□ -0.88
GABRA1-213ENST00000636340 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
GABRA1-213ENST00000636340 TAOK2Q9UL54 1235 aa9.54□□□□□ -0.88
GABRA1-213ENST00000636340 BAZ1BQ9UIG0 1483 aaKnown RBP9.54□□□□□ -0.88
GABRA1-213ENST00000636340 PAXIP1Q6ZW49 1069 aaPredicted RBP9.54□□□□□ -0.88
GABRA1-213ENST00000636340 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
GABRA1-213ENST00000636340 CCER1Q8TC90 406 aaPredicted RBP9.54□□□□□ -0.88
GABRA1-213ENST00000636340 CFAP44Q96MT7 982 aa9.54□□□□□ -0.88
GABRA1-213ENST00000636340 BCANQ96GW7 911 aa9.53□□□□□ -0.88
GABRA1-213ENST00000636340 RUSC2Q8N2Y8 1516 aa9.53□□□□□ -0.88
GABRA1-213ENST00000636340 PEG3Q9GZU2 1588 aa9.52□□□□□ -0.88
GABRA1-213ENST00000636340 NCAPD3P42695 1498 aa9.51□□□□□ -0.89
GABRA1-213ENST00000636340 ZNF692Q9BU19 519 aaPredicted RBP9.49□□□□□ -0.89
GABRA1-213ENST00000636340 SPOCK2Q92563 424 aa9.48□□□□□ -0.89
GABRA1-213ENST00000636340 GOLGA3Q08378 1498 aa9.48□□□□□ -0.89
GABRA1-213ENST00000636340 VSIG10Q8N0Z9 540 aa9.47□□□□□ -0.89
GABRA1-213ENST00000636340 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
GABRA1-213ENST00000636340 PELP1Q8IZL8 1130 aaKnown RBP9.46□□□□□ -0.89
GABRA1-213ENST00000636340 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
GABRA1-213ENST00000636340 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
GABRA1-213ENST00000636340 TSHZ2Q9NRE2 1034 aa9.46□□□□□ -0.9
GABRA1-213ENST00000636340 SYNJ1O43426 1573 aa9.44□□□□□ -0.9
GABRA1-213ENST00000636340 ACIN1Q9UKV3 1341 aaKnown RBP9.43□□□□□ -0.9
GABRA1-213ENST00000636340 KIF21BO75037 1637 aa9.43□□□□□ -0.9
GABRA1-213ENST00000636340 BBXQ8WY36 941 aaPredicted RBP9.43□□□□□ -0.9
GABRA1-213ENST00000636340 UBTFP17480 764 aaKnown RBP9.43□□□□□ -0.9
GABRA1-213ENST00000636340 DIEXFQ68CQ4 756 aaKnown RBP9.43□□□□□ -0.9
GABRA1-213ENST00000636340 TTBK1Q5TCY1 1321 aaPredicted RBP9.42□□□□□ -0.9
GABRA1-213ENST00000636340 CEP164Q9UPV0 1460 aa9.42□□□□□ -0.9
GABRA1-213ENST00000636340 DSG3P32926 999 aa9.41□□□□□ -0.9
GABRA1-213ENST00000636340 NEUROD1Q13562 356 aa9.41□□□□□ -0.9
GABRA1-213ENST00000636340 MIER1Q8N108 512 aa9.41□□□□□ -0.9
GABRA1-213ENST00000636340 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.41□□□□□ -0.9
GABRA1-213ENST00000636340 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
GABRA1-213ENST00000636340 NESP48681 1621 aa9.4□□□□□ -0.91
GABRA1-213ENST00000636340 CHGAP10645 457 aaKnown RBP9.39□□□□□ -0.91
GABRA1-213ENST00000636340 SSUH2Q9Y2M2 353 aa9.38□□□□□ -0.91
GABRA1-213ENST00000636340 ZBTB12Q9Y330 459 aaPredicted RBP9.38□□□□□ -0.91
GABRA1-213ENST00000636340 CIZ1Q9ULV3 898 aaPredicted RBP9.37□□□□□ -0.91
GABRA1-213ENST00000636340 CLIP1P30622 1438 aa9.36□□□□□ -0.91
GABRA1-213ENST00000636340 ZNF316A6NFI3 1004 aaPredicted RBP9.35□□□□□ -0.91
GABRA1-213ENST00000636340 VPS8Q8N3P4 1428 aa9.35□□□□□ -0.91
GABRA1-213ENST00000636340 RAPGEF2Q9Y4G8 1499 aa9.34□□□□□ -0.91
GABRA1-213ENST00000636340 RNF25Q96BH1 459 aaPredicted RBP9.33□□□□□ -0.92
GABRA1-213ENST00000636340 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
GABRA1-213ENST00000636340 CENPBP07199 599 aaPredicted RBP9.32□□□□□ -0.92
GABRA1-213ENST00000636340 TOP2BQ02880 1626 aa9.32□□□□□ -0.92
GABRA1-213ENST00000636340 SPDYE2BA6NHP3 402 aa9.31□□□□□ -0.92
GABRA1-213ENST00000636340 SPDYE6P0CI01 402 aa9.31□□□□□ -0.92
GABRA1-213ENST00000636340 SPDYE2Q495Y8 402 aa9.31□□□□□ -0.92
GABRA1-213ENST00000636340 GTF3C3Q9Y5Q9 886 aa9.31□□□□□ -0.92
GABRA1-213ENST00000636340 STAG3Q9UJ98 1225 aa9.29□□□□□ -0.92
GABRA1-213ENST00000636340 BIVM-ERCC5R4GMW8 1640 aa9.29□□□□□ -0.92
GABRA1-213ENST00000636340 CADPSQ9ULU8 1353 aa9.28□□□□□ -0.92
GABRA1-213ENST00000636340 PRXQ9BXM0 1461 aa9.26□□□□□ -0.93
GABRA1-213ENST00000636340 ERICH3Q5RHP9 1530 aa9.26□□□□□ -0.93
GABRA1-213ENST00000636340 KIF21AQ7Z4S6 1674 aa9.26□□□□□ -0.93
GABRA1-213ENST00000636340 CFTRP13569 1480 aa9.25□□□□□ -0.93
GABRA1-213ENST00000636340 ARAP1Q96P48 1450 aa9.24□□□□□ -0.93
GABRA1-213ENST00000636340 CACNB1Q02641 598 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-213ENST00000636340 NKX1-1Q15270 411 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-213ENST00000636340 LAMC3Q9Y6N6 1575 aa9.24□□□□□ -0.93
GABRA1-213ENST00000636340 ERCC6Q03468 1493 aa9.22□□□□□ -0.93
GABRA1-213ENST00000636340 PRDM2Q13029 1718 aa9.21□□□□□ -0.94
GABRA1-213ENST00000636340 CUX1P39880 1505 aa9.2□□□□□ -0.94
GABRA1-213ENST00000636340 FANCD2Q9BXW9 1451 aa9.2□□□□□ -0.94
GABRA1-213ENST00000636340 CLSPNQ9HAW4 1339 aa9.2□□□□□ -0.94
GABRA1-213ENST00000636340 DHX57Q6P158 1386 aaKnown RBP9.19□□□□□ -0.94
GABRA1-213ENST00000636340 PDS5BQ9NTI5 1447 aa9.17□□□□□ -0.94
GABRA1-213ENST00000636340 RRBP1Q9P2E9 1410 aaKnown RBP9.17□□□□□ -0.94
GABRA1-213ENST00000636340 RANGAP1P46060 587 aaPredicted RBP9.17□□□□□ -0.94
GABRA1-213ENST00000636340 KANK4Q5T7N3 995 aaPredicted RBP9.17□□□□□ -0.94
GABRA1-213ENST00000636340 CUX2O14529 1486 aa9.16□□□□□ -0.94
GABRA1-213ENST00000636340 HS6ST3Q8IZP7 471 aa9.16□□□□□ -0.94
GABRA1-213ENST00000636340 KIF27Q86VH2 1401 aa9.15□□□□□ -0.94
GABRA1-213ENST00000636340 YTHDC1Q96MU7 727 aaKnown RBP9.15□□□□□ -0.94
GABRA1-213ENST00000636340 URB2Q14146 1524 aaKnown RBP9.13□□□□□ -0.95
GABRA1-213ENST00000636340 ARHGAP35Q9NRY4 1499 aa9.13□□□□□ -0.95
GABRA1-213ENST00000636340 DNAJC5Q9H3Z4 198 aa9.12□□□□□ -0.95
GABRA1-213ENST00000636340 THOC2Q8NI27 1593 aaKnown RBP9.12□□□□□ -0.95
GABRA1-213ENST00000636340 NUBP1P53384 320 aa9.12□□□□□ -0.95
GABRA1-213ENST00000636340 GTPBP6O43824 516 aaPredicted RBP9.1□□□□□ -0.95
GABRA1-213ENST00000636340 NBR1Q14596 966 aa9.1□□□□□ -0.95
GABRA1-213ENST00000636340 MRC2Q9UBG0 1479 aa9.1□□□□□ -0.95
GABRA1-213ENST00000636340 CCNB3Q8WWL7 1395 aa9.09□□□□□ -0.95
GABRA1-213ENST00000636340 PLEKHG5O94827 1062 aa9.09□□□□□ -0.95
GABRA1-213ENST00000636340 ZBTB47Q9UFB7 747 aaPredicted RBP9.08□□□□□ -0.96
GABRA1-213ENST00000636340 TOPBP1Q92547 1522 aa9.08□□□□□ -0.96
GABRA1-213ENST00000636340 STK25O00506 426 aa9.08□□□□□ -0.96
GABRA1-213ENST00000636340 IGF1RP08069 1367 aa9.08□□□□□ -0.96
GABRA1-213ENST00000636340 MAP3K1Q13233 1512 aa9.07□□□□□ -0.96
GABRA1-213ENST00000636340 DCAF8Q5TAQ9 597 aa9.06□□□□□ -0.96
GABRA1-213ENST00000636340 DNMBPQ6XZF7 1577 aa9.06□□□□□ -0.96
GABRA1-213ENST00000636340 WDR62O43379 1518 aa9.05□□□□□ -0.96
GABRA1-213ENST00000636340 TIAM1Q13009 1591 aa9.05□□□□□ -0.96
GABRA1-213ENST00000636340 RAD54L2Q9Y4B4 1467 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms