RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 RUSC2Q8N2Y8 1516 aa31.88■■■□□ 2.69
CLN6-214ENST00000636314 KIF27Q86VH2 1401 aa31.72■■■□□ 2.67
CLN6-214ENST00000636314 NPM1P06748 294 aaKnown RBP eCLIP31.71■■■□□ 2.67
CLN6-214ENST00000636314 ADCY10Q96PN6 1610 aa31.67■■■□□ 2.66
CLN6-214ENST00000636314 FAM69CQ0P6D2 419 aa31.66■■■□□ 2.66
CLN6-214ENST00000636314 CUL7Q14999 1698 aa31.66■■■□□ 2.66
CLN6-214ENST00000636314 ABCC10Q5T3U5 1492 aa31.65■■■□□ 2.66
CLN6-214ENST00000636314 MAPKBP1O60336 1514 aa31.65■■■□□ 2.66
CLN6-214ENST00000636314 KIAA0586Q9BVV6 1533 aa31.62■■■□□ 2.65
CLN6-214ENST00000636314 DIP2BQ9P265 1576 aa31.62■■■□□ 2.65
CLN6-214ENST00000636314 IGF1RP08069 1367 aa31.59■■■□□ 2.65
CLN6-214ENST00000636314 TSPOAP1O95153 1857 aa31.54■■■□□ 2.64
CLN6-214ENST00000636314 KDM6BO15054 1643 aa31.46■■■□□ 2.63
CLN6-214ENST00000636314 TTBK1Q5TCY1 1321 aaPredicted RBP31.43■■■□□ 2.62
CLN6-214ENST00000636314 CARMIL1Q5VZK9 1371 aa31.41■■■□□ 2.62
CLN6-214ENST00000636314 PTPRGP23470 1445 aa31.41■■■□□ 2.62
CLN6-214ENST00000636314 CARMIL2Q6F5E8 1435 aa31.35■■■□□ 2.61
CLN6-214ENST00000636314 IQGAP2Q13576 1575 aa31.34■■■□□ 2.61
CLN6-214ENST00000636314 TNIKQ9UKE5 1360 aa31.32■■■□□ 2.6
CLN6-214ENST00000636314 ABCC2Q92887 1545 aa31.29■■■□□ 2.6
CLN6-214ENST00000636314 ASXL2Q76L83 1435 aa31.22■■■□□ 2.59
CLN6-214ENST00000636314 RAPGEF2Q9Y4G8 1499 aa31.21■■■□□ 2.59
CLN6-214ENST00000636314 PLB1Q6P1J6 1458 aa31.2■■■□□ 2.58
CLN6-214ENST00000636314 PPRC1Q5VV67 1664 aaKnown RBP31.19■■■□□ 2.58
CLN6-214ENST00000636314 KDM4FA0A1W2PPD8 638 aa31.19■■■□□ 2.58
CLN6-214ENST00000636314 UHRF1BP1LA0JNW5 1464 aa31.18■■■□□ 2.58
CLN6-214ENST00000636314 GLI2P10070 1586 aa31.17■■■□□ 2.58
CLN6-214ENST00000636314 DISP1Q96F81 1524 aa31.16■■■□□ 2.58
CLN6-214ENST00000636314 UACAQ9BZF9 1416 aa31.15■■■□□ 2.58
CLN6-214ENST00000636314 UGGT2Q9NYU1 1516 aa31.08■■■□□ 2.57
CLN6-214ENST00000636314 ZCCHC11Q5TAX3 1644 aaKnown RBP31.07■■■□□ 2.56
CLN6-214ENST00000636314 KIAA0556O60303 1618 aa31.06■■■□□ 2.56
CLN6-214ENST00000636314 KDM5BQ9UGL1 1544 aa31.04■■■□□ 2.56
CLN6-214ENST00000636314 MAP3K4Q9Y6R4 1608 aa31.03■■■□□ 2.56
CLN6-214ENST00000636314 EPRSP07814 1512 aaKnown RBP31.03■■■□□ 2.56
CLN6-214ENST00000636314 CTTNBP2Q8WZ74 1663 aa31.03■■■□□ 2.56
CLN6-214ENST00000636314 PRXQ9BXM0 1461 aa31■■■□□ 2.55
CLN6-214ENST00000636314 TEX14Q8IWB6 1497 aa30.95■■■□□ 2.54
CLN6-214ENST00000636314 ADGRL1O94910 1474 aa30.93■■■□□ 2.54
CLN6-214ENST00000636314 COL17A1Q9UMD9 1497 aaPredicted RBP30.91■■■□□ 2.54
CLN6-214ENST00000636314 EEA1Q15075 1411 aa30.89■■■□□ 2.53
CLN6-214ENST00000636314 WDR7Q9Y4E6 1490 aa30.86■■■□□ 2.53
CLN6-214ENST00000636314 CSRNP3Q8WYN3 585 aa30.84■■■□□ 2.53
CLN6-214ENST00000636314 GOLGA3Q08378 1498 aa30.82■■■□□ 2.52
CLN6-214ENST00000636314 CFAP43Q8NDM7 1665 aa30.78■■■□□ 2.52
CLN6-214ENST00000636314 ABCA8O94911 1581 aa30.77■■■□□ 2.52
CLN6-214ENST00000636314 KCNH8Q96L42 1107 aa30.72■■■□□ 2.51
CLN6-214ENST00000636314 CD109Q6YHK3 1445 aa30.71■■■□□ 2.51
CLN6-214ENST00000636314 CHIC1Q5VXU3 224 aa30.7■■■□□ 2.51
CLN6-214ENST00000636314 MAGI3Q5TCQ9 1506 aa30.68■■■□□ 2.5
CLN6-214ENST00000636314 FAM9AQ8IZU1 332 aaPredicted RBP30.68■■■□□ 2.5
CLN6-214ENST00000636314 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
CLN6-214ENST00000636314 KIF21BO75037 1637 aa30.63■■■□□ 2.49
CLN6-214ENST00000636314 ILDR1Q86SU0 546 aaPredicted RBP30.59■■■□□ 2.49
CLN6-214ENST00000636314 ARID3CA6NKF2 412 aa30.56■■■□□ 2.48
CLN6-214ENST00000636314 SAMD9Q5K651 1589 aa30.56■■■□□ 2.48
CLN6-214ENST00000636314 P3H3Q8IVL6 736 aa30.55■■■□□ 2.48
CLN6-214ENST00000636314 ATP10BO94823 1461 aa30.49■■■□□ 2.47
CLN6-214ENST00000636314 ARAP3Q8WWN8 1544 aa30.45■■■□□ 2.47
CLN6-214ENST00000636314 ABCA9Q8IUA7 1624 aa30.44■■■□□ 2.46
CLN6-214ENST00000636314 RAPGEF6Q8TEU7 1601 aa30.43■■■□□ 2.46
CLN6-214ENST00000636314 RANGAP1P46060 587 aaPredicted RBP30.4■■■□□ 2.46
CLN6-214ENST00000636314 EFCAB5A4FU69 1503 aa30.37■■■□□ 2.45
CLN6-214ENST00000636314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.35■■■□□ 2.45
CLN6-214ENST00000636314 HNRNPUL2Q1KMD3 747 aaKnown RBP30.35■■■□□ 2.45
CLN6-214ENST00000636314 FHOD3Q2V2M9 1422 aa30.34■■■□□ 2.45
CLN6-214ENST00000636314 EHMT2Q96KQ7 1210 aa30.33■■■□□ 2.45
CLN6-214ENST00000636314 PHLDB1Q86UU1 1377 aa30.32■■■□□ 2.44
CLN6-214ENST00000636314 UBTFP17480 764 aaKnown RBP30.3■■■□□ 2.44
CLN6-214ENST00000636314 NEO1Q92859 1461 aa30.28■■■□□ 2.44
CLN6-214ENST00000636314 RAPGEF3O95398 923 aa30.27■■■□□ 2.44
CLN6-214ENST00000636314 ADAMTSL3P82987 1691 aa30.27■■■□□ 2.44
CLN6-214ENST00000636314 NUP153P49790 1475 aaKnown RBP30.25■■■□□ 2.43
CLN6-214ENST00000636314 FRMPD1Q5SYB0 1578 aa30.23■■■□□ 2.43
CLN6-214ENST00000636314 PTPRMP28827 1452 aa30.2■■■□□ 2.43
CLN6-214ENST00000636314 BCORL1Q5H9F3 1711 aa30.2■■■□□ 2.43
CLN6-214ENST00000636314 MADDQ8WXG6 1647 aa30.15■■■□□ 2.42
CLN6-214ENST00000636314 ARID4BQ4LE39 1312 aaPredicted RBP30.15■■■□□ 2.42
CLN6-214ENST00000636314 RICTORQ6R327 1708 aa30.13■■■□□ 2.41
CLN6-214ENST00000636314 ARHGAP35Q9NRY4 1499 aa30.12■■■□□ 2.41
CLN6-214ENST00000636314 CFAP74Q9C0B2 1584 aa30.11■■■□□ 2.41
CLN6-214ENST00000636314 PLEKHD1A6NEE1 506 aa30.11■■■□□ 2.41
CLN6-214ENST00000636314 ARHGEF40Q8TER5 1519 aa30.11■■■□□ 2.41
CLN6-214ENST00000636314 DENND4BO75064 1496 aaPredicted RBP30.08■■■□□ 2.41
CLN6-214ENST00000636314 RIMS1Q86UR5 1692 aaKnown RBP30.07■■■□□ 2.4
CLN6-214ENST00000636314 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.06■■■□□ 2.42e-6■■■■□ 19.9
CLN6-214ENST00000636314 AKNAQ7Z591 1439 aa30.06■■■□□ 2.4
CLN6-214ENST00000636314 FMN1Q68DA7 1419 aa30.05■■■□□ 2.4
CLN6-214ENST00000636314 TTC37Q6PGP7 1564 aa30.05■■■□□ 2.4
CLN6-214ENST00000636314 FANCAO15360 1455 aa30.05■■■□□ 2.4
CLN6-214ENST00000636314 HECW1Q76N89 1606 aa30.01■■■□□ 2.39
CLN6-214ENST00000636314 PCF11O94913 1555 aaKnown RBP30.01■■■□□ 2.39
CLN6-214ENST00000636314 CDK13Q14004 1512 aaKnown RBP29.97■■■□□ 2.39
CLN6-214ENST00000636314 FBXO41Q8TF61 875 aa29.96■■■□□ 2.39
CLN6-214ENST00000636314 ZMYM4Q5VZL5 1548 aa29.96■■■□□ 2.39
CLN6-214ENST00000636314 LMTK3Q96Q04 1460 aa29.94■■■□□ 2.38
CLN6-214ENST00000636314 ZFYVE16Q7Z3T8 1539 aa29.94■■■□□ 2.38
CLN6-214ENST00000636314 SIGLEC1Q9BZZ2 1709 aa29.92■■■□□ 2.38
CLN6-214ENST00000636314 POGZQ7Z3K3 1410 aa29.91■■■□□ 2.38
CLN6-214ENST00000636314 PLPPR3Q6T4P5 718 aa29.91■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms