RNA–Protein interactions for RNA: ENST00000636295.1

CHRNA7-214, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,160 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-214ENST00000636295 CHD1O14646 1710 aa24.83■■□□□ 1.56
CHRNA7-214ENST00000636295 CTTNBP2Q8WZ74 1663 aa24.81■■□□□ 1.56
CHRNA7-214ENST00000636295 CEP170Q5SW79 1584 aa24.77■■□□□ 1.56
CHRNA7-214ENST00000636295 CLIP1P30622 1438 aa24.75■■□□□ 1.55
CHRNA7-214ENST00000636295 NUP160Q12769 1436 aa24.75■■□□□ 1.55
CHRNA7-214ENST00000636295 KIAA0586Q9BVV6 1533 aa24.72■■□□□ 1.55
CHRNA7-214ENST00000636295 IQGAP2Q13576 1575 aa24.7■■□□□ 1.54
CHRNA7-214ENST00000636295 P3H3Q8IVL6 736 aa24.65■■□□□ 1.54
CHRNA7-214ENST00000636295 ARHGAP35Q9NRY4 1499 aa24.62■■□□□ 1.53
CHRNA7-214ENST00000636295 JPH4Q96JJ6 628 aa24.61■■□□□ 1.53
CHRNA7-214ENST00000636295 OSCARQ8IYS5 282 aa24.59■■□□□ 1.53
CHRNA7-214ENST00000636295 UGGT2Q9NYU1 1516 aa24.56■■□□□ 1.52
CHRNA7-214ENST00000636295 ARAP1Q96P48 1450 aa24.55■■□□□ 1.52
CHRNA7-214ENST00000636295 EFCAB5A4FU69 1503 aa24.54■■□□□ 1.52
CHRNA7-214ENST00000636295 FHOD3Q2V2M9 1422 aa24.52■■□□□ 1.52
CHRNA7-214ENST00000636295 CLASP1Q7Z460 1538 aa24.52■■□□□ 1.52
CHRNA7-214ENST00000636295 SAMD9Q5K651 1589 aa24.52■■□□□ 1.52
CHRNA7-214ENST00000636295 DISP1Q96F81 1524 aa24.49■■□□□ 1.51
CHRNA7-214ENST00000636295 PRG4Q92954 1404 aaPredicted RBP24.47■■□□□ 1.51
CHRNA7-214ENST00000636295 TTBK1Q5TCY1 1321 aaPredicted RBP24.45■■□□□ 1.51
CHRNA7-214ENST00000636295 CARMIL2Q6F5E8 1435 aa24.45■■□□□ 1.5
CHRNA7-214ENST00000636295 VPS8Q8N3P4 1428 aa24.45■■□□□ 1.5
CHRNA7-214ENST00000636295 KIAA0556O60303 1618 aa24.45■■□□□ 1.5
CHRNA7-214ENST00000636295 SHROOM2Q13796 1616 aa24.44■■□□□ 1.5
CHRNA7-214ENST00000636295 DNAJC5Q9H3Z4 198 aa24.43■■□□□ 1.5
CHRNA7-214ENST00000636295 ERCC6L2Q5T890 1561 aa24.36■■□□□ 1.49
CHRNA7-214ENST00000636295 FMN1Q68DA7 1419 aa24.35■■□□□ 1.49
CHRNA7-214ENST00000636295 ATP1B4Q9UN42 357 aaPredicted RBP24.34■■□□□ 1.49
CHRNA7-214ENST00000636295 PTPRGP23470 1445 aa24.27■■□□□ 1.48
CHRNA7-214ENST00000636295 PCF11O94913 1555 aaKnown RBP24.27■■□□□ 1.48
CHRNA7-214ENST00000636295 APLP2Q06481 763 aa24.26■■□□□ 1.47
CHRNA7-214ENST00000636295 PPARGC1BQ86YN6 1023 aaKnown RBP24.26■■□□□ 1.47
CHRNA7-214ENST00000636295 CASKIN1Q8WXD9 1431 aa24.25■■□□□ 1.47
CHRNA7-214ENST00000636295 FYCO1Q9BQS8 1478 aa24.22■■□□□ 1.47
CHRNA7-214ENST00000636295 PLB1Q6P1J6 1458 aa24.2■■□□□ 1.46
CHRNA7-214ENST00000636295 ARID3CA6NKF2 412 aa24.18■■□□□ 1.46
CHRNA7-214ENST00000636295 RAPGEF6Q8TEU7 1601 aa24.17■■□□□ 1.46
CHRNA7-214ENST00000636295 HECW1Q76N89 1606 aa24.13■■□□□ 1.45
CHRNA7-214ENST00000636295 ABCA8O94911 1581 aa24.13■■□□□ 1.45
CHRNA7-214ENST00000636295 ARHGEF11O15085 1522 aa24.12■■□□□ 1.45
CHRNA7-214ENST00000636295 UACAQ9BZF9 1416 aa24.11■■□□□ 1.45
CHRNA7-214ENST00000636295 KANK4Q5T7N3 995 aaPredicted RBP24.1■■□□□ 1.45
CHRNA7-214ENST00000636295 LRRIQ1Q96JM4 1722 aa24.1■■□□□ 1.45
CHRNA7-214ENST00000636295 NUP153P49790 1475 aaKnown RBP24.1■■□□□ 1.45
CHRNA7-214ENST00000636295 TIAM1Q13009 1591 aa24.08■■□□□ 1.45
CHRNA7-214ENST00000636295 EPRSP07814 1512 aaKnown RBP24.07■■□□□ 1.44
CHRNA7-214ENST00000636295 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.07■■□□□ 1.44
CHRNA7-214ENST00000636295 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
CHRNA7-214ENST00000636295 MAP3K1Q13233 1512 aa24.06■■□□□ 1.44
CHRNA7-214ENST00000636295 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
CHRNA7-214ENST00000636295 RIMBP3CA6NJZ7 1639 aa24.05■■□□□ 1.44
CHRNA7-214ENST00000636295 RIMBP3BA6NNM3 1639 aa24.05■■□□□ 1.44
CHRNA7-214ENST00000636295 RIMBP3Q9UFD9 1639 aa24.05■■□□□ 1.44
CHRNA7-214ENST00000636295 CCDC18Q5T9S5 1454 aa24.04■■□□□ 1.44
CHRNA7-214ENST00000636295 CFAP43Q8NDM7 1665 aa24.03■■□□□ 1.44
CHRNA7-214ENST00000636295 ABCC2Q92887 1545 aa24.02■■□□□ 1.44
CHRNA7-214ENST00000636295 ATP10BO94823 1461 aa23.99■■□□□ 1.43
CHRNA7-214ENST00000636295 LRRC9Q6ZRR7 1453 aa23.99■■□□□ 1.43
CHRNA7-214ENST00000636295 CYB5RLQ6IPT4 315 aa23.99■■□□□ 1.43
CHRNA7-214ENST00000636295 UHRF1BP1LA0JNW5 1464 aa23.97■■□□□ 1.43
CHRNA7-214ENST00000636295 MTUS2Q5JR59 1369 aa23.97■■□□□ 1.43
CHRNA7-214ENST00000636295 ADCY10Q96PN6 1610 aa23.94■■□□□ 1.42
CHRNA7-214ENST00000636295 CDK11AQ9UQ88 783 aaPredicted RBP23.94■■□□□ 1.42
CHRNA7-214ENST00000636295 MAGI3Q5TCQ9 1506 aa23.92■■□□□ 1.42
CHRNA7-214ENST00000636295 PLEKHD1A6NEE1 506 aa23.9■■□□□ 1.42
CHRNA7-214ENST00000636295 KDM5BQ9UGL1 1544 aa23.88■■□□□ 1.41
CHRNA7-214ENST00000636295 ZCCHC11Q5TAX3 1644 aaKnown RBP23.87■■□□□ 1.41
CHRNA7-214ENST00000636295 EHBP1L1Q8N3D4 1523 aa23.86■■□□□ 1.41
CHRNA7-214ENST00000636295 NPM1P06748 294 aaKnown RBP eCLIP23.85■■□□□ 1.41
CHRNA7-214ENST00000636295 TROQ12816 1431 aaPredicted RBP23.83■■□□□ 1.41
CHRNA7-214ENST00000636295 TRIM26Q12899 539 aaPredicted RBP23.81■■□□□ 1.4
CHRNA7-214ENST00000636295 SUPT6HQ7KZ85 1726 aaKnown RBP23.79■■□□□ 1.4
CHRNA7-214ENST00000636295 NCOA2Q15596 1464 aa23.78■■□□□ 1.4
CHRNA7-214ENST00000636295 KCNH8Q96L42 1107 aa23.77■■□□□ 1.4
CHRNA7-214ENST00000636295 PHLDB1Q86UU1 1377 aa23.77■■□□□ 1.4
CHRNA7-214ENST00000636295 KIF14Q15058 1648 aa23.73■■□□□ 1.39
CHRNA7-214ENST00000636295 PCGF6Q9BYE7 350 aa23.72■■□□□ 1.39
CHRNA7-214ENST00000636295 ASXL2Q76L83 1435 aa23.71■■□□□ 1.39
CHRNA7-214ENST00000636295 WDR7Q9Y4E6 1490 aa23.68■■□□□ 1.38
CHRNA7-214ENST00000636295 CCNB3Q8WWL7 1395 aa23.67■■□□□ 1.38
CHRNA7-214ENST00000636295 MYOM3Q5VTT5 1437 aa23.66■■□□□ 1.38
CHRNA7-214ENST00000636295 ABCC10Q5T3U5 1492 aa23.63■■□□□ 1.37
CHRNA7-214ENST00000636295 RRBP1Q9P2E9 1410 aaKnown RBP23.63■■□□□ 1.37
CHRNA7-214ENST00000636295 FGD6Q6ZV73 1430 aa23.61■■□□□ 1.37
CHRNA7-214ENST00000636295 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.61■■□□□ 1.37
CHRNA7-214ENST00000636295 FAM50AQ14320 339 aaKnown RBP23.61■■□□□ 1.37
CHRNA7-214ENST00000636295 GPATCH8Q9UKJ3 1502 aaKnown RBP23.59■■□□□ 1.37
CHRNA7-214ENST00000636295 MAPKBP1O60336 1514 aa23.58■■□□□ 1.37
CHRNA7-214ENST00000636295 TTC37Q6PGP7 1564 aa23.58■■□□□ 1.37
CHRNA7-214ENST00000636295 CFDP1Q9UEE9 299 aaPredicted RBP23.58■■□□□ 1.36
CHRNA7-214ENST00000636295 CDC42BPAQ5VT25 1732 aa23.55■■□□□ 1.36
CHRNA7-214ENST00000636295 ZNF777Q9ULD5 760 aaPredicted RBP23.55■■□□□ 1.36
CHRNA7-214ENST00000636295 MIA2Q96PC5 1412 aa23.54■■□□□ 1.36
CHRNA7-214ENST00000636295 ITSN2Q9NZM3 1697 aa23.53■■□□□ 1.36
CHRNA7-214ENST00000636295 PTPN23Q9H3S7 1636 aa23.53■■□□□ 1.36
CHRNA7-214ENST00000636295 ITGAEP38570 1179 aa23.52■■□□□ 1.36
CHRNA7-214ENST00000636295 ZNF644Q9H582 1327 aaPredicted RBP23.52■■□□□ 1.36
CHRNA7-214ENST00000636295 ABCA9Q8IUA7 1624 aa23.49■■□□□ 1.35
CHRNA7-214ENST00000636295 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
CHRNA7-214ENST00000636295 CDC42BPBQ9Y5S2 1711 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms