RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 JPH4Q96JJ6 628 aa30.89■■■□□ 2.54
PNKP-225ENST00000636214 RUSC2Q8N2Y8 1516 aa30.88■■■□□ 2.53
PNKP-225ENST00000636214 CARMIL1Q5VZK9 1371 aa30.78■■■□□ 2.52
PNKP-225ENST00000636214 KIAA0586Q9BVV6 1533 aa30.77■■■□□ 2.52
PNKP-225ENST00000636214 NPM1P06748 294 aaKnown RBP eCLIP30.6■■■□□ 2.49
PNKP-225ENST00000636214 IQGAP2Q13576 1575 aa30.54■■■□□ 2.48
PNKP-225ENST00000636214 CARMIL2Q6F5E8 1435 aa30.54■■■□□ 2.48
PNKP-225ENST00000636214 RAPGEF2Q9Y4G8 1499 aa30.53■■■□□ 2.48
PNKP-225ENST00000636214 ADCY10Q96PN6 1610 aa30.47■■■□□ 2.47
PNKP-225ENST00000636214 PTPRGP23470 1445 aa30.47■■■□□ 2.47
PNKP-225ENST00000636214 TTBK1Q5TCY1 1321 aaPredicted RBP30.47■■■□□ 2.47
PNKP-225ENST00000636214 TNIKQ9UKE5 1360 aa30.43■■■□□ 2.46
PNKP-225ENST00000636214 KIF13AQ9H1H9 1805 aa30.41■■■□□ 2.46
PNKP-225ENST00000636214 MAPKBP1O60336 1514 aa30.41■■■□□ 2.46
PNKP-225ENST00000636214 FAM69CQ0P6D2 419 aa30.36■■■□□ 2.45
PNKP-225ENST00000636214 ABCC10Q5T3U5 1492 aa30.34■■■□□ 2.45
PNKP-225ENST00000636214 UGGT2Q9NYU1 1516 aa30.31■■■□□ 2.44
PNKP-225ENST00000636214 DISP1Q96F81 1524 aa30.29■■■□□ 2.44
PNKP-225ENST00000636214 CTTNBP2Q8WZ74 1663 aa30.29■■■□□ 2.44
PNKP-225ENST00000636214 DIP2BQ9P265 1576 aa30.28■■■□□ 2.44
PNKP-225ENST00000636214 ABCC2Q92887 1545 aa30.25■■■□□ 2.43
PNKP-225ENST00000636214 KIAA0556O60303 1618 aa30.24■■■□□ 2.43
PNKP-225ENST00000636214 UACAQ9BZF9 1416 aa30.23■■■□□ 2.43
PNKP-225ENST00000636214 PRXQ9BXM0 1461 aa30.21■■■□□ 2.43
PNKP-225ENST00000636214 UHRF1BP1LA0JNW5 1464 aa30.2■■■□□ 2.43
PNKP-225ENST00000636214 GOLGA3Q08378 1498 aa30.18■■■□□ 2.42
PNKP-225ENST00000636214 PLB1Q6P1J6 1458 aa30.13■■■□□ 2.41
PNKP-225ENST00000636214 ASXL2Q76L83 1435 aa30.13■■■□□ 2.41
PNKP-225ENST00000636214 TSPOAP1O95153 1857 aa30.12■■■□□ 2.41
PNKP-225ENST00000636214 CSRNP3Q8WYN3 585 aa30.1■■■□□ 2.41
PNKP-225ENST00000636214 AEBP2Q6ZN18 517 aaPredicted RBP30.09■■■□□ 2.41
PNKP-225ENST00000636214 EEA1Q15075 1411 aa30.07■■■□□ 2.4
PNKP-225ENST00000636214 FAM9AQ8IZU1 332 aaPredicted RBP30.06■■■□□ 2.4
PNKP-225ENST00000636214 KDM5BQ9UGL1 1544 aa30.06■■■□□ 2.4
PNKP-225ENST00000636214 ZCCHC11Q5TAX3 1644 aaKnown RBP30.02■■■□□ 2.4
PNKP-225ENST00000636214 KDM6BO15054 1643 aa30■■■□□ 2.39
PNKP-225ENST00000636214 GLI2P10070 1586 aa29.98■■■□□ 2.39
PNKP-225ENST00000636214 EPRSP07814 1512 aaKnown RBP29.92■■■□□ 2.38
PNKP-225ENST00000636214 ABCA8O94911 1581 aa29.91■■■□□ 2.38
PNKP-225ENST00000636214 P3H3Q8IVL6 736 aa29.89■■■□□ 2.38
PNKP-225ENST00000636214 WDR7Q9Y4E6 1490 aa29.88■■■□□ 2.37
PNKP-225ENST00000636214 PPRC1Q5VV67 1664 aaKnown RBP29.83■■■□□ 2.37
PNKP-225ENST00000636214 TEX14Q8IWB6 1497 aa29.83■■■□□ 2.37
PNKP-225ENST00000636214 MAP3K4Q9Y6R4 1608 aa29.82■■■□□ 2.36
PNKP-225ENST00000636214 SAMD9Q5K651 1589 aa29.81■■■□□ 2.36
PNKP-225ENST00000636214 RANGAP1P46060 587 aaPredicted RBP29.79■■■□□ 2.36
PNKP-225ENST00000636214 KCNH8Q96L42 1107 aa29.77■■■□□ 2.36
PNKP-225ENST00000636214 KIF21BO75037 1637 aa29.77■■■□□ 2.36
PNKP-225ENST00000636214 ARID3CA6NKF2 412 aa29.74■■■□□ 2.35
PNKP-225ENST00000636214 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
PNKP-225ENST00000636214 RAPGEF6Q8TEU7 1601 aa29.7■■■□□ 2.34
PNKP-225ENST00000636214 CFAP43Q8NDM7 1665 aa29.69■■■□□ 2.34
PNKP-225ENST00000636214 CD109Q6YHK3 1445 aa29.69■■■□□ 2.34
PNKP-225ENST00000636214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.66■■■□□ 2.34
PNKP-225ENST00000636214 HNRNPUL2Q1KMD3 747 aaKnown RBP29.66■■■□□ 2.34
PNKP-225ENST00000636214 ATP10BO94823 1461 aa29.66■■■□□ 2.34
PNKP-225ENST00000636214 FHOD3Q2V2M9 1422 aa29.65■■■□□ 2.34
PNKP-225ENST00000636214 EFCAB5A4FU69 1503 aa29.63■■■□□ 2.33
PNKP-225ENST00000636214 MAGI3Q5TCQ9 1506 aa29.61■■■□□ 2.33
PNKP-225ENST00000636214 UBTFP17480 764 aaKnown RBP29.61■■■□□ 2.33
PNKP-225ENST00000636214 EHMT2Q96KQ7 1210 aa29.61■■■□□ 2.33
PNKP-225ENST00000636214 COL17A1Q9UMD9 1497 aaPredicted RBP29.57■■■□□ 2.32
PNKP-225ENST00000636214 NUP153P49790 1475 aaKnown RBP29.53■■■□□ 2.32
PNKP-225ENST00000636214 ABCA9Q8IUA7 1624 aa29.48■■■□□ 2.31
PNKP-225ENST00000636214 KDM4FA0A1W2PPD8 638 aa29.47■■■□□ 2.31
PNKP-225ENST00000636214 PLEKHD1A6NEE1 506 aa29.45■■■□□ 2.31
PNKP-225ENST00000636214 PHLDB1Q86UU1 1377 aa29.4■■■□□ 2.3
PNKP-225ENST00000636214 ADGRL1O94910 1474 aa29.39■■■□□ 2.3
PNKP-225ENST00000636214 FMN1Q68DA7 1419 aa29.38■■■□□ 2.29
PNKP-225ENST00000636214 ARAP3Q8WWN8 1544 aa29.37■■■□□ 2.29
PNKP-225ENST00000636214 ATP1B4Q9UN42 357 aaPredicted RBP29.36■■■□□ 2.29
PNKP-225ENST00000636214 NEO1Q92859 1461 aa29.34■■■□□ 2.29
PNKP-225ENST00000636214 ARHGAP35Q9NRY4 1499 aa29.32■■■□□ 2.28
PNKP-225ENST00000636214 HECW1Q76N89 1606 aa29.31■■■□□ 2.28
PNKP-225ENST00000636214 CDK13Q14004 1512 aaKnown RBP29.29■■■□□ 2.28
PNKP-225ENST00000636214 CDK11AQ9UQ88 783 aaPredicted RBP29.24■■■□□ 2.27
PNKP-225ENST00000636214 CFAP74Q9C0B2 1584 aa29.22■■■□□ 2.27
PNKP-225ENST00000636214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.22■■■□□ 2.27
PNKP-225ENST00000636214 RAPGEF3O95398 923 aa29.21■■■□□ 2.27
PNKP-225ENST00000636214 TTC37Q6PGP7 1564 aa29.19■■■□□ 2.26
PNKP-225ENST00000636214 FANCAO15360 1455 aa29.18■■■□□ 2.26
PNKP-225ENST00000636214 AKNAQ7Z591 1439 aa29.16■■■□□ 2.26
PNKP-225ENST00000636214 DENND4BO75064 1496 aaPredicted RBP29.15■■■□□ 2.26
PNKP-225ENST00000636214 CLIP1P30622 1438 aa29.11■■■□□ 2.25
PNKP-225ENST00000636214 FRMPD1Q5SYB0 1578 aa29.1■■■□□ 2.25
PNKP-225ENST00000636214 KIF14Q15058 1648 aa29.09■■■□□ 2.25
PNKP-225ENST00000636214 PLCH2O75038 1416 aa29.06■■■□□ 2.24
PNKP-225ENST00000636214 TROQ12816 1431 aaPredicted RBP29.06■■■□□ 2.24
PNKP-225ENST00000636214 ARID4BQ4LE39 1312 aaPredicted RBP29.06■■■□□ 2.24
PNKP-225ENST00000636214 MYO5CQ9NQX4 1742 aa29.06■■■□□ 2.24
PNKP-225ENST00000636214 RICTORQ6R327 1708 aa29.05■■■□□ 2.24
PNKP-225ENST00000636214 CCDC18Q5T9S5 1454 aa29.04■■■□□ 2.24
PNKP-225ENST00000636214 CASKIN1Q8WXD9 1431 aa29.04■■■□□ 2.24
PNKP-225ENST00000636214 PCF11O94913 1555 aaKnown RBP29.04■■■□□ 2.24
PNKP-225ENST00000636214 ARHGEF40Q8TER5 1519 aa29.02■■■□□ 2.24
PNKP-225ENST00000636214 EFCAB2Q5VUJ9 269 aa29.01■■■□□ 2.23
PNKP-225ENST00000636214 LRRIQ1Q96JM4 1722 aa29■■■□□ 2.23
PNKP-225ENST00000636214 SCAPERQ9BY12 1400 aa28.98■■■□□ 2.23
PNKP-225ENST00000636214 FYCO1Q9BQS8 1478 aa28.97■■■□□ 2.23
PNKP-225ENST00000636214 ZMYM4Q5VZL5 1548 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms