RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 RUSC2Q8N2Y8 1516 aa25.31■■□□□ 1.64
HSPG2-214ENST00000635682 CUL7Q14999 1698 aa25.21■■□□□ 1.63
HSPG2-214ENST00000635682 KIAA0586Q9BVV6 1533 aa25.21■■□□□ 1.63
HSPG2-214ENST00000635682 CARMIL1Q5VZK9 1371 aa25.18■■□□□ 1.62
HSPG2-214ENST00000635682 NPM1P06748 294 aaKnown RBP eCLIP25.17■■□□□ 1.62
HSPG2-214ENST00000635682 KIF13AQ9H1H9 1805 aa25.16■■□□□ 1.62
HSPG2-214ENST00000635682 TTBK1Q5TCY1 1321 aaPredicted RBP25.12■■□□□ 1.61
HSPG2-214ENST00000635682 FAM69CQ0P6D2 419 aa25.11■■□□□ 1.61
HSPG2-214ENST00000635682 AEBP2Q6ZN18 517 aaPredicted RBP25.11■■□□□ 1.61
HSPG2-214ENST00000635682 ADCY10Q96PN6 1610 aa25.1■■□□□ 1.61
HSPG2-214ENST00000635682 ABCC10Q5T3U5 1492 aa25.04■■□□□ 1.6
HSPG2-214ENST00000635682 PTPRGP23470 1445 aa25.03■■□□□ 1.6
HSPG2-214ENST00000635682 MAPKBP1O60336 1514 aa25.02■■□□□ 1.6
HSPG2-214ENST00000635682 DIP2BQ9P265 1576 aa24.97■■□□□ 1.59
HSPG2-214ENST00000635682 CARMIL2Q6F5E8 1435 aa24.96■■□□□ 1.59
HSPG2-214ENST00000635682 TNIKQ9UKE5 1360 aa24.96■■□□□ 1.59
HSPG2-214ENST00000635682 IQGAP2Q13576 1575 aa24.96■■□□□ 1.59
HSPG2-214ENST00000635682 RAPGEF2Q9Y4G8 1499 aa24.91■■□□□ 1.58
HSPG2-214ENST00000635682 TSPOAP1O95153 1857 aa24.89■■□□□ 1.57
HSPG2-214ENST00000635682 DISP1Q96F81 1524 aa24.86■■□□□ 1.57
HSPG2-214ENST00000635682 ABCC2Q92887 1545 aa24.85■■□□□ 1.57
HSPG2-214ENST00000635682 UACAQ9BZF9 1416 aa24.81■■□□□ 1.56
HSPG2-214ENST00000635682 ASXL2Q76L83 1435 aa24.8■■□□□ 1.56
HSPG2-214ENST00000635682 UGGT2Q9NYU1 1516 aa24.79■■□□□ 1.56
HSPG2-214ENST00000635682 UHRF1BP1LA0JNW5 1464 aa24.78■■□□□ 1.56
HSPG2-214ENST00000635682 KDM6BO15054 1643 aa24.76■■□□□ 1.55
HSPG2-214ENST00000635682 PLB1Q6P1J6 1458 aa24.75■■□□□ 1.55
HSPG2-214ENST00000635682 KIAA0556O60303 1618 aa24.73■■□□□ 1.55
HSPG2-214ENST00000635682 CTTNBP2Q8WZ74 1663 aa24.69■■□□□ 1.54
HSPG2-214ENST00000635682 KDM5BQ9UGL1 1544 aa24.68■■□□□ 1.54
HSPG2-214ENST00000635682 GLI2P10070 1586 aa24.67■■□□□ 1.54
HSPG2-214ENST00000635682 ZCCHC11Q5TAX3 1644 aaKnown RBP24.65■■□□□ 1.54
HSPG2-214ENST00000635682 PPRC1Q5VV67 1664 aaKnown RBP24.65■■□□□ 1.54
HSPG2-214ENST00000635682 PRXQ9BXM0 1461 aa24.64■■□□□ 1.54
HSPG2-214ENST00000635682 EPRSP07814 1512 aaKnown RBP24.63■■□□□ 1.53
HSPG2-214ENST00000635682 CHIC1Q5VXU3 224 aa24.61■■□□□ 1.53
HSPG2-214ENST00000635682 KDM4FA0A1W2PPD8 638 aa24.6■■□□□ 1.53
HSPG2-214ENST00000635682 GOLGA3Q08378 1498 aa24.59■■□□□ 1.53
HSPG2-214ENST00000635682 EEA1Q15075 1411 aa24.56■■□□□ 1.52
HSPG2-214ENST00000635682 P3H3Q8IVL6 736 aa24.55■■□□□ 1.52
HSPG2-214ENST00000635682 MAP3K4Q9Y6R4 1608 aa24.54■■□□□ 1.52
HSPG2-214ENST00000635682 KCNH8Q96L42 1107 aa24.53■■□□□ 1.52
HSPG2-214ENST00000635682 COL17A1Q9UMD9 1497 aaPredicted RBP24.52■■□□□ 1.52
HSPG2-214ENST00000635682 WDR7Q9Y4E6 1490 aa24.52■■□□□ 1.52
HSPG2-214ENST00000635682 ABCA8O94911 1581 aa24.52■■□□□ 1.52
HSPG2-214ENST00000635682 CSRNP3Q8WYN3 585 aa24.52■■□□□ 1.52
HSPG2-214ENST00000635682 ARID3CA6NKF2 412 aa24.49■■□□□ 1.51
HSPG2-214ENST00000635682 FAM9AQ8IZU1 332 aaPredicted RBP24.49■■□□□ 1.51
HSPG2-214ENST00000635682 TEX14Q8IWB6 1497 aa24.47■■□□□ 1.51
HSPG2-214ENST00000635682 RANGAP1P46060 587 aaPredicted RBP24.41■■□□□ 1.5
HSPG2-214ENST00000635682 CD109Q6YHK3 1445 aa24.41■■□□□ 1.5
HSPG2-214ENST00000635682 CFAP43Q8NDM7 1665 aa24.36■■□□□ 1.49
HSPG2-214ENST00000635682 ATP10BO94823 1461 aa24.35■■□□□ 1.49
HSPG2-214ENST00000635682 ADGRL1O94910 1474 aa24.35■■□□□ 1.49
HSPG2-214ENST00000635682 MAGI3Q5TCQ9 1506 aa24.34■■□□□ 1.49
HSPG2-214ENST00000635682 SAMD9Q5K651 1589 aa24.33■■□□□ 1.48
HSPG2-214ENST00000635682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.29■■□□□ 1.48
HSPG2-214ENST00000635682 HNRNPUL2Q1KMD3 747 aaKnown RBP24.29■■□□□ 1.48
HSPG2-214ENST00000635682 RAPGEF6Q8TEU7 1601 aa24.26■■□□□ 1.47
HSPG2-214ENST00000635682 FHOD3Q2V2M9 1422 aa24.24■■□□□ 1.47
HSPG2-214ENST00000635682 KIF21BO75037 1637 aa24.21■■□□□ 1.47
HSPG2-214ENST00000635682 EHMT2Q96KQ7 1210 aa24.21■■□□□ 1.47
HSPG2-214ENST00000635682 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
HSPG2-214ENST00000635682 NUP153P49790 1475 aaKnown RBP24.18■■□□□ 1.46
HSPG2-214ENST00000635682 ABCA9Q8IUA7 1624 aa24.17■■□□□ 1.46
HSPG2-214ENST00000635682 ARAP3Q8WWN8 1544 aa24.15■■□□□ 1.46
HSPG2-214ENST00000635682 RAPGEF3O95398 923 aa24.13■■□□□ 1.45
HSPG2-214ENST00000635682 PLEKHD1A6NEE1 506 aa24.11■■□□□ 1.45
HSPG2-214ENST00000635682 PHLDB1Q86UU1 1377 aa24.08■■□□□ 1.45
HSPG2-214ENST00000635682 EFCAB5A4FU69 1503 aa24.05■■□□□ 1.44
HSPG2-214ENST00000635682 NEO1Q92859 1461 aa24.05■■□□□ 1.44
HSPG2-214ENST00000635682 HECW2Q9P2P5 1572 aa24.01■■□□□ 1.43
HSPG2-214ENST00000635682 ATP1B4Q9UN42 357 aaPredicted RBP24■■□□□ 1.43
HSPG2-214ENST00000635682 CDK13Q14004 1512 aaKnown RBP23.98■■□□□ 1.43
HSPG2-214ENST00000635682 FRMPD1Q5SYB0 1578 aa23.97■■□□□ 1.43
HSPG2-214ENST00000635682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.96■■□□□ 1.431e-20■■■■□ 20.7
HSPG2-214ENST00000635682 AKNAQ7Z591 1439 aa23.94■■□□□ 1.42
HSPG2-214ENST00000635682 ARID4BQ4LE39 1312 aaPredicted RBP23.94■■□□□ 1.42
HSPG2-214ENST00000635682 TTC37Q6PGP7 1564 aa23.93■■□□□ 1.42
HSPG2-214ENST00000635682 FANCAO15360 1455 aa23.93■■□□□ 1.42
HSPG2-214ENST00000635682 DENND4BO75064 1496 aaPredicted RBP23.92■■□□□ 1.42
HSPG2-214ENST00000635682 ARHGAP35Q9NRY4 1499 aa23.91■■□□□ 1.42
HSPG2-214ENST00000635682 ADAMTSL3P82987 1691 aa23.89■■□□□ 1.41
HSPG2-214ENST00000635682 FMN1Q68DA7 1419 aa23.88■■□□□ 1.41
HSPG2-214ENST00000635682 ILDR1Q86SU0 546 aaPredicted RBP23.88■■□□□ 1.41
HSPG2-214ENST00000635682 RICTORQ6R327 1708 aa23.87■■□□□ 1.41
HSPG2-214ENST00000635682 PTPRMP28827 1452 aa23.86■■□□□ 1.41
HSPG2-214ENST00000635682 CFAP74Q9C0B2 1584 aa23.85■■□□□ 1.41
HSPG2-214ENST00000635682 BCORL1Q5H9F3 1711 aa23.84■■□□□ 1.41
HSPG2-214ENST00000635682 HECW1Q76N89 1606 aa23.84■■□□□ 1.41
HSPG2-214ENST00000635682 ARHGEF40Q8TER5 1519 aa23.81■■□□□ 1.4
HSPG2-214ENST00000635682 CDK11AQ9UQ88 783 aaPredicted RBP23.81■■□□□ 1.4
HSPG2-214ENST00000635682 PLCH2O75038 1416 aa23.81■■□□□ 1.4
HSPG2-214ENST00000635682 MADDQ8WXG6 1647 aa23.8■■□□□ 1.4
HSPG2-214ENST00000635682 SCAPERQ9BY12 1400 aa23.79■■□□□ 1.4
HSPG2-214ENST00000635682 YEATS2Q9ULM3 1422 aa23.78■■□□□ 1.4
HSPG2-214ENST00000635682 EFCAB2Q5VUJ9 269 aa23.76■■□□□ 1.39
HSPG2-214ENST00000635682 PLPPR3Q6T4P5 718 aa23.76■■□□□ 1.39
HSPG2-214ENST00000635682 ZFYVE16Q7Z3T8 1539 aa23.75■■□□□ 1.39
HSPG2-214ENST00000635682 KIF14Q15058 1648 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms