RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 NAP1L5Q96NT1 182 aaPredicted RBP15.48■□□□□ 0.07
COL11A1-211ENST00000635193 BECN1Q14457 450 aa15.46■□□□□ 0.07
COL11A1-211ENST00000635193 NOP58Q9Y2X3 529 aaKnown RBP15.46■□□□□ 0.07
COL11A1-211ENST00000635193 DEKP35659 375 aaKnown RBP15.44■□□□□ 0.06
COL11A1-211ENST00000635193 GOLGA3Q08378 1498 aa15.42■□□□□ 0.06
COL11A1-211ENST00000635193 MTUS2Q5JR59 1369 aa15.42■□□□□ 0.06
COL11A1-211ENST00000635193 KDM2AQ9Y2K7 1162 aa15.41■□□□□ 0.06
COL11A1-211ENST00000635193 EEA1Q15075 1411 aa15.4■□□□□ 0.06
COL11A1-211ENST00000635193 LAS1LQ9Y4W2 734 aaKnown RBP15.4■□□□□ 0.06
COL11A1-211ENST00000635193 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
COL11A1-211ENST00000635193 PPP4R2Q9NY27 417 aa15.38■□□□□ 0.05
COL11A1-211ENST00000635193 GOLGA6L22H0YM25 854 aa15.35■□□□□ 0.05
COL11A1-211ENST00000635193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.05
COL11A1-211ENST00000635193 RRP7BPQ9NSQ0 103 aa15.34■□□□□ 0.05
COL11A1-211ENST00000635193 TNIKQ9UKE5 1360 aa15.33■□□□□ 0.05
COL11A1-211ENST00000635193 RB1CC1Q8TDY2 1594 aa15.32■□□□□ 0.04
COL11A1-211ENST00000635193 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
COL11A1-211ENST00000635193 RBM19Q9Y4C8 960 aaKnown RBP15.31■□□□□ 0.04
COL11A1-211ENST00000635193 TSPY4P0CV99 314 aa15.3■□□□□ 0.04
COL11A1-211ENST00000635193 TSPY10P0CW01 314 aa15.3■□□□□ 0.04
COL11A1-211ENST00000635193 CDK11BP21127 795 aaKnown RBP15.3■□□□□ 0.04
COL11A1-211ENST00000635193 SENP3-EIF4A1A0A087X0R7 540 aa15.3■□□□□ 0.04
COL11A1-211ENST00000635193 PTMAP06454 111 aaKnown RBP15.3■□□□□ 0.04
COL11A1-211ENST00000635193 DNTTIP2Q5QJE6 756 aaKnown RBP15.3■□□□□ 0.04
COL11A1-211ENST00000635193 NCLP19338 710 aaKnown RBP15.28■□□□□ 0.04
COL11A1-211ENST00000635193 MYH16Q9H6N6 1097 aa15.28■□□□□ 0.04
COL11A1-211ENST00000635193 B4GALNT3Q6L9W6 998 aa15.25■□□□□ 0.03
COL11A1-211ENST00000635193 SIN3AQ96ST3 1273 aa15.25■□□□□ 0.03
COL11A1-211ENST00000635193 STAG3Q9UJ98 1225 aa15.24■□□□□ 0.03
COL11A1-211ENST00000635193 CEP164Q9UPV0 1460 aa15.22■□□□□ 0.03
COL11A1-211ENST00000635193 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.21■□□□□ 0.03
COL11A1-211ENST00000635193 WRNQ14191 1432 aaPredicted RBP eCLIP15.19■□□□□ 0.02
COL11A1-211ENST00000635193 L1TD1Q5T7N2 865 aaKnown RBP15.19■□□□□ 0.02
COL11A1-211ENST00000635193 ESF1Q9H501 851 aaKnown RBP15.18■□□□□ 0.02
COL11A1-211ENST00000635193 NACADO15069 1562 aa15.18■□□□□ 0.02
COL11A1-211ENST00000635193 CCER2I3L3R5 266 aa15.18■□□□□ 0.02
COL11A1-211ENST00000635193 TSHZ2Q9NRE2 1034 aa15.18■□□□□ 0.02
COL11A1-211ENST00000635193 RGS3P49796 1198 aa15.16■□□□□ 0.02
COL11A1-211ENST00000635193 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
COL11A1-211ENST00000635193 KNSTRNQ9Y448 316 aa15.14■□□□□ 0.01
COL11A1-211ENST00000635193 RGL3Q3MIN7 710 aa15.13■□□□□ 0.01
COL11A1-211ENST00000635193 NPM1P06748 294 aaKnown RBP eCLIP15.12■□□□□ 0.01
COL11A1-211ENST00000635193 CCNB3Q8WWL7 1395 aa15.12■□□□□ 0.01
COL11A1-211ENST00000635193 FTSJ3Q8IY81 847 aaKnown RBP15.11■□□□□ 0.01
COL11A1-211ENST00000635193 TIMELESSQ9UNS1 1208 aa15.11■□□□□ 0.01
COL11A1-211ENST00000635193 CDCA8Q53HL2 280 aa15.1■□□□□ 0.01
COL11A1-211ENST00000635193 MSNP26038 577 aaKnown RBP15.1■□□□□ 0.01
COL11A1-211ENST00000635193 CFAP53Q96M91 514 aa15.09■□□□□ 0.01
COL11A1-211ENST00000635193 ARID4BQ4LE39 1312 aaPredicted RBP15.09■□□□□ 0.01
COL11A1-211ENST00000635193 KIF27Q86VH2 1401 aa15.08■□□□□ 0
COL11A1-211ENST00000635193 AMER1Q5JTC6 1135 aaPredicted RBP15.07■□□□□ 0
COL11A1-211ENST00000635193 PNNQ9H307 717 aaKnown RBP15.07■□□□□ 0
COL11A1-211ENST00000635193 CASC1Q6TDU7 716 aa15.06■□□□□ 0
COL11A1-211ENST00000635193 NEUROD2Q15784 382 aa15.05■□□□□ -0
COL11A1-211ENST00000635193 FRAT1Q92837 279 aaPredicted RBP15.05■□□□□ -0
COL11A1-211ENST00000635193 PLCB2Q00722 1185 aa15.04■□□□□ -0
COL11A1-211ENST00000635193 CHAF1AQ13111 956 aaPredicted RBP15.04■□□□□ -0
COL11A1-211ENST00000635193 ZRSR1Q15695 479 aaKnown RBP15.03■□□□□ -0
COL11A1-211ENST00000635193 HSP90AB1P08238 724 aaKnown RBP15.02■□□□□ -0
COL11A1-211ENST00000635193 CC2D1BQ5T0F9 858 aaKnown RBP15.02■□□□□ -0
COL11A1-211ENST00000635193 CFDP1Q9UEE9 299 aaPredicted RBP15.02□□□□□ -0.01
COL11A1-211ENST00000635193 TPRNQ4KMQ1 711 aa15.01□□□□□ -0.01
COL11A1-211ENST00000635193 PLEKHD1A6NEE1 506 aa15.01□□□□□ -0.01
COL11A1-211ENST00000635193 CHMP7Q8WUX9 453 aaPredicted RBP15.01□□□□□ -0.01
COL11A1-211ENST00000635193 SETD5Q9C0A6 1442 aa15□□□□□ -0.01
COL11A1-211ENST00000635193 SOGA1O94964 1423 aa14.99□□□□□ -0.01
COL11A1-211ENST00000635193 HSPA5P11021 654 aaKnown RBP14.99□□□□□ -0.01
COL11A1-211ENST00000635193 VPS8Q8N3P4 1428 aa14.97□□□□□ -0.01
COL11A1-211ENST00000635193 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
COL11A1-211ENST00000635193 HSCBQ8IWL3 235 aa14.97□□□□□ -0.01
COL11A1-211ENST00000635193 MS4A1P11836 297 aa14.96□□□□□ -0.01
COL11A1-211ENST00000635193 IPO9Q96P70 1041 aaKnown RBP14.96□□□□□ -0.02
COL11A1-211ENST00000635193 FHAD1B1AJZ9 1412 aa14.95□□□□□ -0.02
COL11A1-211ENST00000635193 GOLGA6L6A8MZA4 724 aa14.95□□□□□ -0.02
COL11A1-211ENST00000635193 RSPH6AQ9H0K4 717 aa14.95□□□□□ -0.02
COL11A1-211ENST00000635193 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
COL11A1-211ENST00000635193 PLPPR3Q6T4P5 718 aa14.94□□□□□ -0.02
COL11A1-211ENST00000635193 NUDCQ9Y266 331 aa14.94□□□□□ -0.02
COL11A1-211ENST00000635193 TCERG1O14776 1098 aaKnown RBP14.94□□□□□ -0.02
COL11A1-211ENST00000635193 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
COL11A1-211ENST00000635193 ARID3AQ99856 593 aa14.93□□□□□ -0.02
COL11A1-211ENST00000635193 HSP90AA2PQ14568 343 aaPredicted RBP14.93□□□□□ -0.02
COL11A1-211ENST00000635193 BAZ1BQ9UIG0 1483 aaKnown RBP14.93□□□□□ -0.02
COL11A1-211ENST00000635193 KCNH8Q96L42 1107 aa14.92□□□□□ -0.02
COL11A1-211ENST00000635193 NRDCO43847 1150 aa14.92□□□□□ -0.02
COL11A1-211ENST00000635193 SPRYD3Q8NCJ5 442 aa14.92□□□□□ -0.02
COL11A1-211ENST00000635193 TMF1P82094 1093 aa14.91□□□□□ -0.02
COL11A1-211ENST00000635193 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
COL11A1-211ENST00000635193 RCAN3Q9UKA8 241 aa14.9□□□□□ -0.02
COL11A1-211ENST00000635193 KANK4Q5T7N3 995 aaPredicted RBP14.9□□□□□ -0.02
COL11A1-211ENST00000635193 DCAF11Q8TEB1 546 aa14.89□□□□□ -0.03
COL11A1-211ENST00000635193 RAB3GAP2Q9H2M9 1393 aa14.89□□□□□ -0.03
COL11A1-211ENST00000635193 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
COL11A1-211ENST00000635193 GZF1Q9H116 711 aaPredicted RBP14.88□□□□□ -0.03
COL11A1-211ENST00000635193 PPP1R15AO75807 674 aaPredicted RBP14.87□□□□□ -0.03
COL11A1-211ENST00000635193 CECR2Q9BXF3 1484 aa14.87□□□□□ -0.03
COL11A1-211ENST00000635193 BAZ1AQ9NRL2 1556 aaPredicted RBP14.86□□□□□ -0.03
COL11A1-211ENST00000635193 USP35Q9P2H5 1018 aa14.86□□□□□ -0.03
COL11A1-211ENST00000635193 PTMSP20962 102 aa14.86□□□□□ -0.03
COL11A1-211ENST00000635193 ARHGAP35Q9NRY4 1499 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms