RNA–Protein interactions for RNA: ENST00000635129.1

SMARCA2-234, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 3

Gene SMARCA2, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-234ENST00000635129 CHD1O14646 1710 aa14.94□□□□□ -0.02
SMARCA2-234ENST00000635129 NUP160Q12769 1436 aa14.93□□□□□ -0.02
SMARCA2-234ENST00000635129 CEP162Q5TB80 1403 aa14.93□□□□□ -0.02
SMARCA2-234ENST00000635129 CEP170Q5SW79 1584 aa14.93□□□□□ -0.02
SMARCA2-234ENST00000635129 KIAA0586Q9BVV6 1533 aa14.91□□□□□ -0.02
SMARCA2-234ENST00000635129 CLIP1P30622 1438 aa14.9□□□□□ -0.02
SMARCA2-234ENST00000635129 CTTNBP2Q8WZ74 1663 aa14.9□□□□□ -0.02
SMARCA2-234ENST00000635129 IQGAP2Q13576 1575 aa14.88□□□□□ -0.03
SMARCA2-234ENST00000635129 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
SMARCA2-234ENST00000635129 JPH4Q96JJ6 628 aa14.85□□□□□ -0.03
SMARCA2-234ENST00000635129 P3H3Q8IVL6 736 aa14.84□□□□□ -0.03
SMARCA2-234ENST00000635129 ARHGAP35Q9NRY4 1499 aa14.82□□□□□ -0.04
SMARCA2-234ENST00000635129 UGGT2Q9NYU1 1516 aa14.81□□□□□ -0.04
SMARCA2-234ENST00000635129 CLASP1Q7Z460 1538 aa14.8□□□□□ -0.04
SMARCA2-234ENST00000635129 EFCAB5A4FU69 1503 aa14.79□□□□□ -0.04
SMARCA2-234ENST00000635129 FHOD3Q2V2M9 1422 aa14.78□□□□□ -0.04
SMARCA2-234ENST00000635129 ARAP1Q96P48 1450 aa14.77□□□□□ -0.04
SMARCA2-234ENST00000635129 PRG4Q92954 1404 aaPredicted RBP14.77□□□□□ -0.04
SMARCA2-234ENST00000635129 CARMIL2Q6F5E8 1435 aa14.76□□□□□ -0.05
SMARCA2-234ENST00000635129 TTBK1Q5TCY1 1321 aaPredicted RBP14.76□□□□□ -0.05
SMARCA2-234ENST00000635129 SAMD9Q5K651 1589 aa14.75□□□□□ -0.05
SMARCA2-234ENST00000635129 DISP1Q96F81 1524 aa14.75□□□□□ -0.05
SMARCA2-234ENST00000635129 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
SMARCA2-234ENST00000635129 SHROOM2Q13796 1616 aa14.72□□□□□ -0.05
SMARCA2-234ENST00000635129 VPS8Q8N3P4 1428 aa14.71□□□□□ -0.05
SMARCA2-234ENST00000635129 FMN1Q68DA7 1419 aa14.68□□□□□ -0.06
SMARCA2-234ENST00000635129 ATP1B4Q9UN42 357 aaPredicted RBP14.67□□□□□ -0.06
SMARCA2-234ENST00000635129 ERCC6L2Q5T890 1561 aa14.67□□□□□ -0.06
SMARCA2-234ENST00000635129 PTPRGP23470 1445 aa14.66□□□□□ -0.06
SMARCA2-234ENST00000635129 APLP2Q06481 763 aa14.62□□□□□ -0.07
SMARCA2-234ENST00000635129 CASKIN1Q8WXD9 1431 aa14.61□□□□□ -0.07
SMARCA2-234ENST00000635129 PCF11O94913 1555 aaKnown RBP14.6□□□□□ -0.07
SMARCA2-234ENST00000635129 PLB1Q6P1J6 1458 aa14.58□□□□□ -0.08
SMARCA2-234ENST00000635129 FYCO1Q9BQS8 1478 aa14.58□□□□□ -0.08
SMARCA2-234ENST00000635129 ARHGEF11O15085 1522 aa14.58□□□□□ -0.08
SMARCA2-234ENST00000635129 ARID3CA6NKF2 412 aa14.58□□□□□ -0.08
SMARCA2-234ENST00000635129 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
SMARCA2-234ENST00000635129 UACAQ9BZF9 1416 aa14.55□□□□□ -0.08
SMARCA2-234ENST00000635129 RAPGEF6Q8TEU7 1601 aa14.55□□□□□ -0.08
SMARCA2-234ENST00000635129 ABCA8O94911 1581 aa14.54□□□□□ -0.08
SMARCA2-234ENST00000635129 HECW1Q76N89 1606 aa14.54□□□□□ -0.08
SMARCA2-234ENST00000635129 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.53□□□□□ -0.08
SMARCA2-234ENST00000635129 HNRNPUL2Q1KMD3 747 aaKnown RBP14.53□□□□□ -0.08
SMARCA2-234ENST00000635129 NUP153P49790 1475 aaKnown RBP14.52□□□□□ -0.08
SMARCA2-234ENST00000635129 RIMBP3CA6NJZ7 1639 aa14.52□□□□□ -0.09
SMARCA2-234ENST00000635129 RIMBP3BA6NNM3 1639 aa14.52□□□□□ -0.09
SMARCA2-234ENST00000635129 RIMBP3Q9UFD9 1639 aa14.52□□□□□ -0.09
SMARCA2-234ENST00000635129 EPRSP07814 1512 aaKnown RBP14.5□□□□□ -0.09
SMARCA2-234ENST00000635129 CCDC18Q5T9S5 1454 aa14.5□□□□□ -0.09
SMARCA2-234ENST00000635129 CYB5RLQ6IPT4 315 aa14.49□□□□□ -0.09
SMARCA2-234ENST00000635129 ABCC2Q92887 1545 aa14.49□□□□□ -0.09
SMARCA2-234ENST00000635129 CDK13Q14004 1512 aaKnown RBP14.48□□□□□ -0.09
SMARCA2-234ENST00000635129 TIAM1Q13009 1591 aa14.47□□□□□ -0.09
SMARCA2-234ENST00000635129 UHRF1BP1LA0JNW5 1464 aa14.47□□□□□ -0.09
SMARCA2-234ENST00000635129 KANK4Q5T7N3 995 aaPredicted RBP14.47□□□□□ -0.09
SMARCA2-234ENST00000635129 MAP3K1Q13233 1512 aa14.46□□□□□ -0.09
SMARCA2-234ENST00000635129 ATP10BO94823 1461 aa14.45□□□□□ -0.1
SMARCA2-234ENST00000635129 CDK11AQ9UQ88 783 aaPredicted RBP14.45□□□□□ -0.1
SMARCA2-234ENST00000635129 MTUS2Q5JR59 1369 aa14.45□□□□□ -0.1
SMARCA2-234ENST00000635129 CFAP43Q8NDM7 1665 aa14.44□□□□□ -0.1
SMARCA2-234ENST00000635129 NPM1P06748 294 aaKnown RBP eCLIP14.43□□□□□ -0.1
SMARCA2-234ENST00000635129 ADCY10Q96PN6 1610 aa14.43□□□□□ -0.1
SMARCA2-234ENST00000635129 LRRC9Q6ZRR7 1453 aa14.43□□□□□ -0.1
SMARCA2-234ENST00000635129 LRRIQ1Q96JM4 1722 aa14.42□□□□□ -0.1
SMARCA2-234ENST00000635129 PLEKHD1A6NEE1 506 aa14.42□□□□□ -0.1
SMARCA2-234ENST00000635129 DNAJC5Q9H3Z4 198 aa14.41□□□□□ -0.1
SMARCA2-234ENST00000635129 KDM5BQ9UGL1 1544 aa14.4□□□□□ -0.1
SMARCA2-234ENST00000635129 EHBP1L1Q8N3D4 1523 aa14.39□□□□□ -0.11
SMARCA2-234ENST00000635129 MAGI3Q5TCQ9 1506 aa14.38□□□□□ -0.11
SMARCA2-234ENST00000635129 TROQ12816 1431 aaPredicted RBP14.37□□□□□ -0.11
SMARCA2-234ENST00000635129 ZCCHC11Q5TAX3 1644 aaKnown RBP14.37□□□□□ -0.11
SMARCA2-234ENST00000635129 KCNH8Q96L42 1107 aa14.34□□□□□ -0.11
SMARCA2-234ENST00000635129 NCOA2Q15596 1464 aa14.32□□□□□ -0.12
SMARCA2-234ENST00000635129 ASXL2Q76L83 1435 aa14.32□□□□□ -0.12
SMARCA2-234ENST00000635129 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
SMARCA2-234ENST00000635129 SUPT6HQ7KZ85 1726 aaKnown RBP14.3□□□□□ -0.12
SMARCA2-234ENST00000635129 PHLDB1Q86UU1 1377 aa14.3□□□□□ -0.12
SMARCA2-234ENST00000635129 KIF14Q15058 1648 aa14.28□□□□□ -0.12
SMARCA2-234ENST00000635129 CCNB3Q8WWL7 1395 aa14.28□□□□□ -0.12
SMARCA2-234ENST00000635129 TRIM26Q12899 539 aaPredicted RBP14.27□□□□□ -0.13
SMARCA2-234ENST00000635129 MAPKBP1O60336 1514 aa14.25□□□□□ -0.13
SMARCA2-234ENST00000635129 MYOM3Q5VTT5 1437 aa14.24□□□□□ -0.13
SMARCA2-234ENST00000635129 ABCC10Q5T3U5 1492 aa14.24□□□□□ -0.13
SMARCA2-234ENST00000635129 FAM50AQ14320 339 aaKnown RBP14.22□□□□□ -0.13
SMARCA2-234ENST00000635129 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.21□□□□□ -0.13
SMARCA2-234ENST00000635129 CFDP1Q9UEE9 299 aaPredicted RBP14.21□□□□□ -0.13
SMARCA2-234ENST00000635129 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
SMARCA2-234ENST00000635129 GPATCH8Q9UKJ3 1502 aaKnown RBP14.2□□□□□ -0.14
SMARCA2-234ENST00000635129 ZNF777Q9ULD5 760 aaPredicted RBP14.2□□□□□ -0.14
SMARCA2-234ENST00000635129 RRBP1Q9P2E9 1410 aaKnown RBP14.2□□□□□ -0.14
SMARCA2-234ENST00000635129 TTC37Q6PGP7 1564 aa14.19□□□□□ -0.14
SMARCA2-234ENST00000635129 PCGF6Q9BYE7 350 aa14.19□□□□□ -0.14
SMARCA2-234ENST00000635129 MIA2Q96PC5 1412 aa14.18□□□□□ -0.14
SMARCA2-234ENST00000635129 FAM69CQ0P6D2 419 aa14.18□□□□□ -0.14
SMARCA2-234ENST00000635129 ITGAEP38570 1179 aa14.16□□□□□ -0.14
SMARCA2-234ENST00000635129 PLCH2O75038 1416 aa14.15□□□□□ -0.14
SMARCA2-234ENST00000635129 ARHGAP5Q13017 1502 aa14.15□□□□□ -0.14
SMARCA2-234ENST00000635129 ITSN2Q9NZM3 1697 aa14.15□□□□□ -0.14
SMARCA2-234ENST00000635129 ABCA9Q8IUA7 1624 aa14.15□□□□□ -0.14
SMARCA2-234ENST00000635129 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms