RNA–Protein interactions for RNA: ENST00000634925.1

SMARCA2-230, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 1,582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-230ENST00000634925 TNIKQ9UKE5 1360 aa18.09■□□□□ 0.49
SMARCA2-230ENST00000634925 NUP160Q12769 1436 aa18.06■□□□□ 0.48
SMARCA2-230ENST00000634925 KIAA0586Q9BVV6 1533 aa18.01■□□□□ 0.47
SMARCA2-230ENST00000634925 IQGAP2Q13576 1575 aa18■□□□□ 0.47
SMARCA2-230ENST00000634925 RANGAP1P46060 587 aaPredicted RBP18■□□□□ 0.47
SMARCA2-230ENST00000634925 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
SMARCA2-230ENST00000634925 CLASP1Q7Z460 1538 aa17.96■□□□□ 0.46
SMARCA2-230ENST00000634925 OSCARQ8IYS5 282 aa17.95■□□□□ 0.46
SMARCA2-230ENST00000634925 CLIP1P30622 1438 aa17.92■□□□□ 0.46
SMARCA2-230ENST00000634925 UGGT2Q9NYU1 1516 aa17.9■□□□□ 0.46
SMARCA2-230ENST00000634925 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
SMARCA2-230ENST00000634925 SHROOM2Q13796 1616 aa17.89■□□□□ 0.45
SMARCA2-230ENST00000634925 ARHGAP35Q9NRY4 1499 aa17.89■□□□□ 0.45
SMARCA2-230ENST00000634925 SAMD9Q5K651 1589 aa17.88■□□□□ 0.45
SMARCA2-230ENST00000634925 P3H3Q8IVL6 736 aa17.85■□□□□ 0.45
SMARCA2-230ENST00000634925 EFCAB5A4FU69 1503 aa17.85■□□□□ 0.45
SMARCA2-230ENST00000634925 DISP1Q96F81 1524 aa17.85■□□□□ 0.45
SMARCA2-230ENST00000634925 KIAA0556O60303 1618 aa17.83■□□□□ 0.44
SMARCA2-230ENST00000634925 PRG4Q92954 1404 aaPredicted RBP17.83■□□□□ 0.44
SMARCA2-230ENST00000634925 ARAP1Q96P48 1450 aa17.82■□□□□ 0.44
SMARCA2-230ENST00000634925 ERCC6L2Q5T890 1561 aa17.81■□□□□ 0.44
SMARCA2-230ENST00000634925 FHOD3Q2V2M9 1422 aa17.8■□□□□ 0.44
SMARCA2-230ENST00000634925 CARMIL2Q6F5E8 1435 aa17.78■□□□□ 0.44
SMARCA2-230ENST00000634925 TTBK1Q5TCY1 1321 aaPredicted RBP17.72■□□□□ 0.43
SMARCA2-230ENST00000634925 VPS8Q8N3P4 1428 aa17.7■□□□□ 0.42
SMARCA2-230ENST00000634925 ARHGEF11O15085 1522 aa17.68■□□□□ 0.42
SMARCA2-230ENST00000634925 FMN1Q68DA7 1419 aa17.67■□□□□ 0.42
SMARCA2-230ENST00000634925 PTPRGP23470 1445 aa17.66■□□□□ 0.42
SMARCA2-230ENST00000634925 PCF11O94913 1555 aaKnown RBP17.65■□□□□ 0.42
SMARCA2-230ENST00000634925 RIMBP3CA6NJZ7 1639 aa17.64■□□□□ 0.42
SMARCA2-230ENST00000634925 RIMBP3BA6NNM3 1639 aa17.64■□□□□ 0.42
SMARCA2-230ENST00000634925 RIMBP3Q9UFD9 1639 aa17.64■□□□□ 0.42
SMARCA2-230ENST00000634925 PLB1Q6P1J6 1458 aa17.62■□□□□ 0.41
SMARCA2-230ENST00000634925 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
SMARCA2-230ENST00000634925 CASKIN1Q8WXD9 1431 aa17.61■□□□□ 0.41
SMARCA2-230ENST00000634925 LRRIQ1Q96JM4 1722 aa17.6■□□□□ 0.41
SMARCA2-230ENST00000634925 ABCA8O94911 1581 aa17.6■□□□□ 0.41
SMARCA2-230ENST00000634925 FYCO1Q9BQS8 1478 aa17.58■□□□□ 0.41
SMARCA2-230ENST00000634925 ATP1B4Q9UN42 357 aaPredicted RBP17.58■□□□□ 0.41
SMARCA2-230ENST00000634925 HECW1Q76N89 1606 aa17.56■□□□□ 0.4
SMARCA2-230ENST00000634925 UACAQ9BZF9 1416 aa17.56■□□□□ 0.4
SMARCA2-230ENST00000634925 NUP153P49790 1475 aaKnown RBP17.54■□□□□ 0.4
SMARCA2-230ENST00000634925 ARID3CA6NKF2 412 aa17.53■□□□□ 0.4
SMARCA2-230ENST00000634925 ABCC2Q92887 1545 aa17.52■□□□□ 0.4
SMARCA2-230ENST00000634925 ADCY10Q96PN6 1610 aa17.52■□□□□ 0.39
SMARCA2-230ENST00000634925 EPRSP07814 1512 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-230ENST00000634925 CYB5RLQ6IPT4 315 aa17.5■□□□□ 0.39
SMARCA2-230ENST00000634925 CDK13Q14004 1512 aaKnown RBP17.5■□□□□ 0.39
SMARCA2-230ENST00000634925 CFAP43Q8NDM7 1665 aa17.49■□□□□ 0.39
SMARCA2-230ENST00000634925 UHRF1BP1LA0JNW5 1464 aa17.49■□□□□ 0.39
SMARCA2-230ENST00000634925 TIAM1Q13009 1591 aa17.49■□□□□ 0.39
SMARCA2-230ENST00000634925 DNAJC5Q9H3Z4 198 aa17.49■□□□□ 0.39
SMARCA2-230ENST00000634925 APLP2Q06481 763 aa17.48■□□□□ 0.39
SMARCA2-230ENST00000634925 ATP10BO94823 1461 aa17.47■□□□□ 0.39
SMARCA2-230ENST00000634925 CCDC18Q5T9S5 1454 aa17.47■□□□□ 0.39
SMARCA2-230ENST00000634925 PPARGC1BQ86YN6 1023 aaKnown RBP17.46■□□□□ 0.39
SMARCA2-230ENST00000634925 MAP3K1Q13233 1512 aa17.46■□□□□ 0.38
SMARCA2-230ENST00000634925 ZCCHC11Q5TAX3 1644 aaKnown RBP17.44■□□□□ 0.38
SMARCA2-230ENST00000634925 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.43■□□□□ 0.38
SMARCA2-230ENST00000634925 HNRNPUL2Q1KMD3 747 aaKnown RBP17.43■□□□□ 0.38
SMARCA2-230ENST00000634925 KANK4Q5T7N3 995 aaPredicted RBP17.43■□□□□ 0.38
SMARCA2-230ENST00000634925 KDM5BQ9UGL1 1544 aa17.43■□□□□ 0.38
SMARCA2-230ENST00000634925 MAGI3Q5TCQ9 1506 aa17.41■□□□□ 0.38
SMARCA2-230ENST00000634925 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
SMARCA2-230ENST00000634925 MTUS2Q5JR59 1369 aa17.36■□□□□ 0.37
SMARCA2-230ENST00000634925 NPM1P06748 294 aaKnown RBP eCLIP17.34■□□□□ 0.37
SMARCA2-230ENST00000634925 EHBP1L1Q8N3D4 1523 aa17.34■□□□□ 0.37
SMARCA2-230ENST00000634925 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
SMARCA2-230ENST00000634925 PLEKHD1A6NEE1 506 aa17.33■□□□□ 0.37
SMARCA2-230ENST00000634925 TROQ12816 1431 aaPredicted RBP17.32■□□□□ 0.36
SMARCA2-230ENST00000634925 SUPT6HQ7KZ85 1726 aaKnown RBP17.3■□□□□ 0.36
SMARCA2-230ENST00000634925 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
SMARCA2-230ENST00000634925 KIF14Q15058 1648 aa17.3■□□□□ 0.36
SMARCA2-230ENST00000634925 WDR7Q9Y4E6 1490 aa17.27■□□□□ 0.36
SMARCA2-230ENST00000634925 NCOA2Q15596 1464 aa17.26■□□□□ 0.35
SMARCA2-230ENST00000634925 KCNH8Q96L42 1107 aa17.26■□□□□ 0.35
SMARCA2-230ENST00000634925 MAPKBP1O60336 1514 aa17.26■□□□□ 0.35
SMARCA2-230ENST00000634925 PHLDB1Q86UU1 1377 aa17.23■□□□□ 0.35
SMARCA2-230ENST00000634925 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.35
SMARCA2-230ENST00000634925 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.2■□□□□ 0.34
SMARCA2-230ENST00000634925 TTC37Q6PGP7 1564 aa17.2■□□□□ 0.34
SMARCA2-230ENST00000634925 CDC42BPAQ5VT25 1732 aa17.2■□□□□ 0.34
SMARCA2-230ENST00000634925 ABCA9Q8IUA7 1624 aa17.16■□□□□ 0.34
SMARCA2-230ENST00000634925 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
SMARCA2-230ENST00000634925 MYO5CQ9NQX4 1742 aa17.15■□□□□ 0.34
SMARCA2-230ENST00000634925 MYOM3Q5VTT5 1437 aa17.15■□□□□ 0.34
SMARCA2-230ENST00000634925 GPATCH8Q9UKJ3 1502 aaKnown RBP17.15■□□□□ 0.34
SMARCA2-230ENST00000634925 ITSN2Q9NZM3 1697 aa17.15■□□□□ 0.34
SMARCA2-230ENST00000634925 CDC42BPBQ9Y5S2 1711 aa17.15■□□□□ 0.34
SMARCA2-230ENST00000634925 DIP2BQ9P265 1576 aa17.14■□□□□ 0.33
SMARCA2-230ENST00000634925 KIF13AQ9H1H9 1805 aa17.13■□□□□ 0.33
SMARCA2-230ENST00000634925 PREX2Q70Z35 1606 aa17.12■□□□□ 0.33
SMARCA2-230ENST00000634925 FGD6Q6ZV73 1430 aa17.12■□□□□ 0.33
SMARCA2-230ENST00000634925 GLI2P10070 1586 aa17.11■□□□□ 0.33
SMARCA2-230ENST00000634925 RRBP1Q9P2E9 1410 aaKnown RBP17.11■□□□□ 0.33
SMARCA2-230ENST00000634925 FAM69CQ0P6D2 419 aa17.09■□□□□ 0.33
SMARCA2-230ENST00000634925 PTPN23Q9H3S7 1636 aa17.09■□□□□ 0.33
SMARCA2-230ENST00000634925 MAP3K4Q9Y6R4 1608 aa17.09■□□□□ 0.33
SMARCA2-230ENST00000634925 TRIM26Q12899 539 aaPredicted RBP17.08■□□□□ 0.32
SMARCA2-230ENST00000634925 CFDP1Q9UEE9 299 aaPredicted RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms