RNA–Protein interactions for RNA: ENST00000633109.1

LINC01002-221, Transcript of long intergenic non-protein coding RNA 1002, humanhuman

TSL 3

Gene LINC01002, Length 523 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01002-221ENST00000633109 NCAPD3P42695 1498 aa7.55□□□□□ -1.2
LINC01002-221ENST00000633109 HMGXB3Q12766 1538 aa7.52□□□□□ -1.21
LINC01002-221ENST00000633109 POTEGQ6S5H5 508 aa7.51□□□□□ -1.21
LINC01002-221ENST00000633109 ZRANB1Q9UGI0 708 aa7.51□□□□□ -1.21
LINC01002-221ENST00000633109 ERCC6Q03468 1493 aa7.49□□□□□ -1.21
LINC01002-221ENST00000633109 ZNF579Q8NAF0 562 aaKnown RBP7.49□□□□□ -1.21
LINC01002-221ENST00000633109 OTUD5Q96G74 571 aa7.49□□□□□ -1.21
LINC01002-221ENST00000633109 ATAD2BQ9ULI0 1458 aa7.48□□□□□ -1.21
LINC01002-221ENST00000633109 SMARCA2P51531 1590 aa7.47□□□□□ -1.21
LINC01002-221ENST00000633109 GALR2O43603 387 aaPredicted RBP7.44□□□□□ -1.22
LINC01002-221ENST00000633109 THOC2Q8NI27 1593 aaKnown RBP7.44□□□□□ -1.22
LINC01002-221ENST00000633109 PEG3Q9GZU2 1588 aa7.44□□□□□ -1.22
LINC01002-221ENST00000633109 SMARCA4P51532 1647 aa7.44□□□□□ -1.22
LINC01002-221ENST00000633109 PAK3O75914 559 aaPredicted RBP7.41□□□□□ -1.22
LINC01002-221ENST00000633109 PCDH10Q9P2E7 1040 aa7.41□□□□□ -1.22
LINC01002-221ENST00000633109 POTEB2H3BUK9 544 aa7.4□□□□□ -1.22
LINC01002-221ENST00000633109 LAMC3Q9Y6N6 1575 aa7.4□□□□□ -1.22
LINC01002-221ENST00000633109 NESP48681 1621 aa7.4□□□□□ -1.22
LINC01002-221ENST00000633109 BAZ1AQ9NRL2 1556 aaPredicted RBP7.39□□□□□ -1.23
LINC01002-221ENST00000633109 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
LINC01002-221ENST00000633109 PHF12Q96QT6 1004 aa7.34□□□□□ -1.23
LINC01002-221ENST00000633109 METRNQ9UJH8 293 aa7.32□□□□□ -1.24
LINC01002-221ENST00000633109 PDS5BQ9NTI5 1447 aa7.32□□□□□ -1.24
LINC01002-221ENST00000633109 WDR62O43379 1518 aa7.32□□□□□ -1.24
LINC01002-221ENST00000633109 MAMSTRQ6ZN01 415 aa7.31□□□□□ -1.24
LINC01002-221ENST00000633109 FAM163AQ96GL9 167 aaPredicted RBP7.31□□□□□ -1.24
LINC01002-221ENST00000633109 CREBZFQ9NS37 354 aa7.31□□□□□ -1.24
LINC01002-221ENST00000633109 KIF21AQ7Z4S6 1674 aa7.31□□□□□ -1.24
LINC01002-221ENST00000633109 PELP1Q8IZL8 1130 aaKnown RBP7.29□□□□□ -1.24
LINC01002-221ENST00000633109 STAG3Q9UJ98 1225 aa7.29□□□□□ -1.24
LINC01002-221ENST00000633109 MRC2Q9UBG0 1479 aa7.29□□□□□ -1.24
LINC01002-221ENST00000633109 MROH2BQ7Z745 1585 aa7.29□□□□□ -1.24
LINC01002-221ENST00000633109 SLC39A7Q92504 469 aa7.28□□□□□ -1.24
LINC01002-221ENST00000633109 SCUBE2Q9NQ36 999 aa7.28□□□□□ -1.24
LINC01002-221ENST00000633109 CADPSQ9ULU8 1353 aa7.27□□□□□ -1.25
LINC01002-221ENST00000633109 NPM1P06748 294 aaKnown RBP eCLIP7.26□□□□□ -1.25
LINC01002-221ENST00000633109 C7P10643 843 aa7.26□□□□□ -1.25
LINC01002-221ENST00000633109 CSRNP3Q8WYN3 585 aa7.26□□□□□ -1.25
LINC01002-221ENST00000633109 ASTLQ6HA08 431 aaPredicted RBP7.22□□□□□ -1.25
LINC01002-221ENST00000633109 MS4A3Q96HJ5 214 aa7.22□□□□□ -1.25
LINC01002-221ENST00000633109 CEP164Q9UPV0 1460 aa7.22□□□□□ -1.25
LINC01002-221ENST00000633109 ATMINO43313 823 aaPredicted RBP7.21□□□□□ -1.26
LINC01002-221ENST00000633109 CFTRP13569 1480 aa7.2□□□□□ -1.26
LINC01002-221ENST00000633109 POTEJP0CG39 1038 aa7.2□□□□□ -1.26
LINC01002-221ENST00000633109 LCE2DQ5TA82 110 aaPredicted RBP7.2□□□□□ -1.26
LINC01002-221ENST00000633109 FANCD2Q9BXW9 1451 aa7.18□□□□□ -1.26
LINC01002-221ENST00000633109 TRIM41Q8WV44 630 aa7.17□□□□□ -1.26
LINC01002-221ENST00000633109 CDAN1Q8IWY9 1227 aa7.16□□□□□ -1.26
LINC01002-221ENST00000633109 WIZO95785 1651 aa7.16□□□□□ -1.26
LINC01002-221ENST00000633109 URB2Q14146 1524 aaKnown RBP7.15□□□□□ -1.27
LINC01002-221ENST00000633109 TOP2AP11388 1531 aaKnown RBP7.13□□□□□ -1.27
LINC01002-221ENST00000633109 ATN1P54259 1190 aaPredicted RBP7.13□□□□□ -1.27
LINC01002-221ENST00000633109 EHMT2Q96KQ7 1210 aa7.13□□□□□ -1.27
LINC01002-221ENST00000633109 TSPYL2Q9H2G4 693 aaPredicted RBP7.12□□□□□ -1.27
LINC01002-221ENST00000633109 RIMBP3CA6NJZ7 1639 aa7.11□□□□□ -1.27
LINC01002-221ENST00000633109 RIMBP3BA6NNM3 1639 aa7.11□□□□□ -1.27
LINC01002-221ENST00000633109 RIMBP3Q9UFD9 1639 aa7.11□□□□□ -1.27
LINC01002-221ENST00000633109 ARHGEF11O15085 1522 aa7.1□□□□□ -1.27
LINC01002-221ENST00000633109 SEC24BO95487 1268 aa7.09□□□□□ -1.27
LINC01002-221ENST00000633109 IFT140Q96RY7 1462 aa7.09□□□□□ -1.27
LINC01002-221ENST00000633109 RSF1Q96T23 1441 aaPredicted RBP7.09□□□□□ -1.28
LINC01002-221ENST00000633109 PRDM2Q13029 1718 aa7.08□□□□□ -1.28
LINC01002-221ENST00000633109 SPDYE4A6NLX3 237 aa7.08□□□□□ -1.28
LINC01002-221ENST00000633109 MNX1P50219 401 aaPredicted RBP7.07□□□□□ -1.28
LINC01002-221ENST00000633109 ZNF608Q9ULD9 1512 aaPredicted RBP7.06□□□□□ -1.28
LINC01002-221ENST00000633109 EIF4G3O43432 1585 aaKnown RBP7.05□□□□□ -1.28
LINC01002-221ENST00000633109 BMP2KQ9NSY1 1161 aaPredicted RBP7.05□□□□□ -1.28
LINC01002-221ENST00000633109 TOPBP1Q92547 1522 aa7.04□□□□□ -1.28
LINC01002-221ENST00000633109 ABCC8Q09428 1581 aa7.03□□□□□ -1.28
LINC01002-221ENST00000633109 POTEFA5A3E0 1075 aa7.03□□□□□ -1.28
LINC01002-221ENST00000633109 TARBP1Q13395 1621 aaKnown RBP7.02□□□□□ -1.29
LINC01002-221ENST00000633109 ARAP1Q96P48 1450 aa7.02□□□□□ -1.29
LINC01002-221ENST00000633109 DNMBPQ6XZF7 1577 aa7.02□□□□□ -1.29
LINC01002-221ENST00000633109 MMRN1Q13201 1228 aa7.01□□□□□ -1.29
LINC01002-221ENST00000633109 SLAIN1Q8ND83 568 aa7.01□□□□□ -1.29
LINC01002-221ENST00000633109 KIF12Q96FN5 646 aa7.01□□□□□ -1.29
LINC01002-221ENST00000633109 CCDC61Q9Y6R9 512 aa7.01□□□□□ -1.29
LINC01002-221ENST00000633109 TIE1P35590 1138 aa7□□□□□ -1.29
LINC01002-221ENST00000633109 TRPC6Q9Y210 931 aa7□□□□□ -1.29
LINC01002-221ENST00000633109 WDR97A6NE52 1622 aa7□□□□□ -1.29
LINC01002-221ENST00000633109 ST18O60284 1047 aa6.99□□□□□ -1.29
LINC01002-221ENST00000633109 COLQQ9Y215 455 aaPredicted RBP6.99□□□□□ -1.29
LINC01002-221ENST00000633109 CCDC88BA6NC98 1476 aa6.98□□□□□ -1.29
LINC01002-221ENST00000633109 POLA1P09884 1462 aaPredicted RBP6.98□□□□□ -1.29
LINC01002-221ENST00000633109 CLASP1Q7Z460 1538 aa6.97□□□□□ -1.29
LINC01002-221ENST00000633109 CHD1O14646 1710 aa6.97□□□□□ -1.29
LINC01002-221ENST00000633109 MAP3K13O43283 966 aa6.97□□□□□ -1.29
LINC01002-221ENST00000633109 SPNS2Q8IVW8 549 aa6.97□□□□□ -1.29
LINC01002-221ENST00000633109 TTLL13PA6NNM8 815 aa6.96□□□□□ -1.3
LINC01002-221ENST00000633109 TRIM35Q9UPQ4 493 aa6.95□□□□□ -1.3
LINC01002-221ENST00000633109 AQRO60306 1485 aaKnown RBP eCLIP6.94□□□□□ -1.3
LINC01002-221ENST00000633109 PLEKHG5O94827 1062 aa6.94□□□□□ -1.3
LINC01002-221ENST00000633109 MAGI1Q96QZ7 1491 aaPredicted RBP6.93□□□□□ -1.3
LINC01002-221ENST00000633109 IER5LQ5T953 404 aa6.93□□□□□ -1.3
LINC01002-221ENST00000633109 CYB5RLQ6IPT4 315 aa6.92□□□□□ -1.3
LINC01002-221ENST00000633109 SYNJ1O43426 1573 aa6.91□□□□□ -1.3
LINC01002-221ENST00000633109 PLCG2P16885 1265 aa6.91□□□□□ -1.3
LINC01002-221ENST00000633109 SNAPC4Q5SXM2 1469 aa6.91□□□□□ -1.3
LINC01002-221ENST00000633109 TMEM121BQ9BXQ6 578 aaPredicted RBP6.9□□□□□ -1.3
LINC01002-221ENST00000633109 PROM2Q8N271 834 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms