RNA–Protein interactions for RNA: ENST00000631025.2

SOX2-OT-259, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 954 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-259ENST00000631025 ERICH3Q5RHP9 1530 aa24■■□□□ 1.43
SOX2-OT-259ENST00000631025 CEP170Q5SW79 1584 aa23.98■■□□□ 1.43
SOX2-OT-259ENST00000631025 NUP160Q12769 1436 aa23.95■■□□□ 1.42
SOX2-OT-259ENST00000631025 ERCC6L2Q5T890 1561 aa23.91■■□□□ 1.42
SOX2-OT-259ENST00000631025 IGF1RP08069 1367 aa23.87■■□□□ 1.41
SOX2-OT-259ENST00000631025 KIF27Q86VH2 1401 aa23.84■■□□□ 1.41
SOX2-OT-259ENST00000631025 SHROOM2Q13796 1616 aa23.76■■□□□ 1.39
SOX2-OT-259ENST00000631025 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
SOX2-OT-259ENST00000631025 PRG4Q92954 1404 aaPredicted RBP23.71■■□□□ 1.39
SOX2-OT-259ENST00000631025 JPH4Q96JJ6 628 aa23.7■■□□□ 1.38
SOX2-OT-259ENST00000631025 CARMIL1Q5VZK9 1371 aa23.68■■□□□ 1.38
SOX2-OT-259ENST00000631025 TRHP20396 242 aaPredicted RBP23.68■■□□□ 1.38
SOX2-OT-259ENST00000631025 CUL7Q14999 1698 aa23.67■■□□□ 1.38
SOX2-OT-259ENST00000631025 KIAA0586Q9BVV6 1533 aa23.61■■□□□ 1.37
SOX2-OT-259ENST00000631025 RAPGEF2Q9Y4G8 1499 aa23.49■■□□□ 1.35
SOX2-OT-259ENST00000631025 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
SOX2-OT-259ENST00000631025 IQGAP2Q13576 1575 aa23.43■■□□□ 1.34
SOX2-OT-259ENST00000631025 ADCY10Q96PN6 1610 aa23.39■■□□□ 1.33
SOX2-OT-259ENST00000631025 PRXQ9BXM0 1461 aa23.37■■□□□ 1.33
SOX2-OT-259ENST00000631025 DISP1Q96F81 1524 aa23.37■■□□□ 1.33
SOX2-OT-259ENST00000631025 PTPRGP23470 1445 aa23.35■■□□□ 1.33
SOX2-OT-259ENST00000631025 TNIKQ9UKE5 1360 aa23.32■■□□□ 1.32
SOX2-OT-259ENST00000631025 CARMIL2Q6F5E8 1435 aa23.32■■□□□ 1.32
SOX2-OT-259ENST00000631025 UGGT2Q9NYU1 1516 aa23.3■■□□□ 1.32
SOX2-OT-259ENST00000631025 PPP4R3CPQ6ZMV5 832 aa23.29■■□□□ 1.32
SOX2-OT-259ENST00000631025 FAM9AQ8IZU1 332 aaPredicted RBP23.25■■□□□ 1.31
SOX2-OT-259ENST00000631025 CSRNP3Q8WYN3 585 aa23.25■■□□□ 1.31
SOX2-OT-259ENST00000631025 KIAA0556O60303 1618 aa23.24■■□□□ 1.31
SOX2-OT-259ENST00000631025 NPM1P06748 294 aaKnown RBP eCLIP23.24■■□□□ 1.31
SOX2-OT-259ENST00000631025 MAPKBP1O60336 1514 aa23.23■■□□□ 1.31
SOX2-OT-259ENST00000631025 ABCC10Q5T3U5 1492 aa23.2■■□□□ 1.3
SOX2-OT-259ENST00000631025 FAM69CQ0P6D2 419 aa23.2■■□□□ 1.3
SOX2-OT-259ENST00000631025 KIF13AQ9H1H9 1805 aa23.19■■□□□ 1.3
SOX2-OT-259ENST00000631025 CTTNBP2Q8WZ74 1663 aa23.19■■□□□ 1.3
SOX2-OT-259ENST00000631025 UACAQ9BZF9 1416 aa23.18■■□□□ 1.3
SOX2-OT-259ENST00000631025 ABCC2Q92887 1545 aa23.18■■□□□ 1.3
SOX2-OT-259ENST00000631025 DIP2BQ9P265 1576 aa23.16■■□□□ 1.3
SOX2-OT-259ENST00000631025 UHRF1BP1LA0JNW5 1464 aa23.14■■□□□ 1.29
SOX2-OT-259ENST00000631025 PLB1Q6P1J6 1458 aa23.12■■□□□ 1.29
SOX2-OT-259ENST00000631025 EEA1Q15075 1411 aa23.11■■□□□ 1.29
SOX2-OT-259ENST00000631025 ASXL2Q76L83 1435 aa23.11■■□□□ 1.29
SOX2-OT-259ENST00000631025 P3H3Q8IVL6 736 aa23.11■■□□□ 1.29
SOX2-OT-259ENST00000631025 SCAF1Q9H7N4 1312 aaKnown RBP23.09■■□□□ 1.29
SOX2-OT-259ENST00000631025 GOLGA3Q08378 1498 aa23.07■■□□□ 1.28
SOX2-OT-259ENST00000631025 EHMT2Q96KQ7 1210 aa23.07■■□□□ 1.28
SOX2-OT-259ENST00000631025 RANGAP1P46060 587 aaPredicted RBP23.06■■□□□ 1.28
SOX2-OT-259ENST00000631025 KDM5BQ9UGL1 1544 aa23.06■■□□□ 1.28
SOX2-OT-259ENST00000631025 ABCA8O94911 1581 aa23.01■■□□□ 1.27
SOX2-OT-259ENST00000631025 ZCCHC11Q5TAX3 1644 aaKnown RBP23.01■■□□□ 1.27
SOX2-OT-259ENST00000631025 ARID3CA6NKF2 412 aa23■■□□□ 1.27
SOX2-OT-259ENST00000631025 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
SOX2-OT-259ENST00000631025 KIF21BO75037 1637 aa22.96■■□□□ 1.27
SOX2-OT-259ENST00000631025 EPRSP07814 1512 aaKnown RBP22.95■■□□□ 1.26
SOX2-OT-259ENST00000631025 FHOD3Q2V2M9 1422 aa22.92■■□□□ 1.26
SOX2-OT-259ENST00000631025 TSPOAP1O95153 1857 aa22.91■■□□□ 1.26
SOX2-OT-259ENST00000631025 GLI2P10070 1586 aa22.9■■□□□ 1.26
SOX2-OT-259ENST00000631025 MAPK8IP2Q13387 824 aaPredicted RBP22.9■■□□□ 1.26
SOX2-OT-259ENST00000631025 WDR7Q9Y4E6 1490 aa22.9■■□□□ 1.26
SOX2-OT-259ENST00000631025 PPRC1Q5VV67 1664 aaKnown RBP22.87■■□□□ 1.25
SOX2-OT-259ENST00000631025 ATP10BO94823 1461 aa22.85■■□□□ 1.25
SOX2-OT-259ENST00000631025 KDM6BO15054 1643 aa22.84■■□□□ 1.25
SOX2-OT-259ENST00000631025 KCNH8Q96L42 1107 aa22.84■■□□□ 1.25
SOX2-OT-259ENST00000631025 UBTFP17480 764 aaKnown RBP22.82■■□□□ 1.24
SOX2-OT-259ENST00000631025 MAP3K4Q9Y6R4 1608 aa22.81■■□□□ 1.24
SOX2-OT-259ENST00000631025 COL17A1Q9UMD9 1497 aaPredicted RBP22.8■■□□□ 1.24
SOX2-OT-259ENST00000631025 NUP153P49790 1475 aaKnown RBP22.79■■□□□ 1.24
SOX2-OT-259ENST00000631025 RAPGEF6Q8TEU7 1601 aa22.79■■□□□ 1.24
SOX2-OT-259ENST00000631025 KCNA4P22459 653 aa22.75■■□□□ 1.23
SOX2-OT-259ENST00000631025 EFCAB5A4FU69 1503 aa22.74■■□□□ 1.23
SOX2-OT-259ENST00000631025 CD109Q6YHK3 1445 aa22.73■■□□□ 1.23
SOX2-OT-259ENST00000631025 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
SOX2-OT-259ENST00000631025 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.71■■□□□ 1.23
SOX2-OT-259ENST00000631025 HNRNPUL2Q1KMD3 747 aaKnown RBP22.71■■□□□ 1.23
SOX2-OT-259ENST00000631025 TEX14Q8IWB6 1497 aa22.68■■□□□ 1.22
SOX2-OT-259ENST00000631025 NCBP3Q53F19 620 aaKnown RBP22.68■■□□□ 1.22
SOX2-OT-259ENST00000631025 MAGI3Q5TCQ9 1506 aa22.66■■□□□ 1.22
SOX2-OT-259ENST00000631025 CNKSR2Q8WXI2 1034 aa22.65■■□□□ 1.22
SOX2-OT-259ENST00000631025 CDK13Q14004 1512 aaKnown RBP22.64■■□□□ 1.21
SOX2-OT-259ENST00000631025 CFAP43Q8NDM7 1665 aa22.63■■□□□ 1.21
SOX2-OT-259ENST00000631025 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
SOX2-OT-259ENST00000631025 KDM4FA0A1W2PPD8 638 aa22.58■■□□□ 1.21
SOX2-OT-259ENST00000631025 ATP1B4Q9UN42 357 aaPredicted RBP22.58■■□□□ 1.21
SOX2-OT-259ENST00000631025 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
SOX2-OT-259ENST00000631025 FMN1Q68DA7 1419 aa22.55■■□□□ 1.2
SOX2-OT-259ENST00000631025 PLEKHD1A6NEE1 506 aa22.54■■□□□ 1.2
SOX2-OT-259ENST00000631025 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.19
SOX2-OT-259ENST00000631025 TTC37Q6PGP7 1564 aa22.49■■□□□ 1.19
SOX2-OT-259ENST00000631025 HECW1Q76N89 1606 aa22.49■■□□□ 1.19
SOX2-OT-259ENST00000631025 RAPGEF3O95398 923 aa22.47■■□□□ 1.19
SOX2-OT-259ENST00000631025 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
SOX2-OT-259ENST00000631025 PCF11O94913 1555 aaKnown RBP22.46■■□□□ 1.19
SOX2-OT-259ENST00000631025 CLIP1P30622 1438 aa22.45■■□□□ 1.18
SOX2-OT-259ENST00000631025 ADGRL1O94910 1474 aa22.45■■□□□ 1.18
SOX2-OT-259ENST00000631025 NEO1Q92859 1461 aa22.42■■□□□ 1.18
SOX2-OT-259ENST00000631025 LRRIQ1Q96JM4 1722 aa22.41■■□□□ 1.18
SOX2-OT-259ENST00000631025 FRMPD1Q5SYB0 1578 aa22.4■■□□□ 1.18
SOX2-OT-259ENST00000631025 CASKIN1Q8WXD9 1431 aa22.4■■□□□ 1.18
SOX2-OT-259ENST00000631025 KIF14Q15058 1648 aa22.39■■□□□ 1.17
SOX2-OT-259ENST00000631025 FANCAO15360 1455 aa22.38■■□□□ 1.17
SOX2-OT-259ENST00000631025 TROQ12816 1431 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms