RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 JPH4Q96JJ6 628 aa31.45■■■□□ 2.63
PNKP-224ENST00000631020 PRG4Q92954 1404 aaPredicted RBP31.43■■■□□ 2.62
PNKP-224ENST00000631020 KIAA0586Q9BVV6 1533 aa31.42■■■□□ 2.62
PNKP-224ENST00000631020 CARMIL1Q5VZK9 1371 aa31.4■■■□□ 2.62
PNKP-224ENST00000631020 TRHP20396 242 aaPredicted RBP31.39■■■□□ 2.62
PNKP-224ENST00000631020 RAPGEF2Q9Y4G8 1499 aa31.18■■■□□ 2.58
PNKP-224ENST00000631020 IQGAP2Q13576 1575 aa31.17■■■□□ 2.58
PNKP-224ENST00000631020 CARMIL2Q6F5E8 1435 aa31.09■■■□□ 2.57
PNKP-224ENST00000631020 ADCY10Q96PN6 1610 aa31.05■■■□□ 2.56
PNKP-224ENST00000631020 MAPKBP1O60336 1514 aa31.01■■■□□ 2.55
PNKP-224ENST00000631020 PTPRGP23470 1445 aa31.01■■■□□ 2.55
PNKP-224ENST00000631020 TNIKQ9UKE5 1360 aa31■■■□□ 2.55
PNKP-224ENST00000631020 UGGT2Q9NYU1 1516 aa31■■■□□ 2.55
PNKP-224ENST00000631020 NPM1P06748 294 aaKnown RBP eCLIP30.99■■■□□ 2.55
PNKP-224ENST00000631020 FAM9AQ8IZU1 332 aaPredicted RBP30.98■■■□□ 2.55
PNKP-224ENST00000631020 PRXQ9BXM0 1461 aa30.98■■■□□ 2.55
PNKP-224ENST00000631020 KIF13AQ9H1H9 1805 aa30.97■■■□□ 2.55
PNKP-224ENST00000631020 DISP1Q96F81 1524 aa30.97■■■□□ 2.55
PNKP-224ENST00000631020 CTTNBP2Q8WZ74 1663 aa30.95■■■□□ 2.55
PNKP-224ENST00000631020 EEA1Q15075 1411 aa30.94■■■□□ 2.54
PNKP-224ENST00000631020 CSRNP3Q8WYN3 585 aa30.92■■■□□ 2.54
PNKP-224ENST00000631020 ABCC10Q5T3U5 1492 aa30.89■■■□□ 2.54
PNKP-224ENST00000631020 KIAA0556O60303 1618 aa30.87■■■□□ 2.53
PNKP-224ENST00000631020 UHRF1BP1LA0JNW5 1464 aa30.86■■■□□ 2.53
PNKP-224ENST00000631020 ABCC2Q92887 1545 aa30.84■■■□□ 2.53
PNKP-224ENST00000631020 DIP2BQ9P265 1576 aa30.83■■■□□ 2.53
PNKP-224ENST00000631020 UACAQ9BZF9 1416 aa30.81■■■□□ 2.52
PNKP-224ENST00000631020 GOLGA3Q08378 1498 aa30.79■■■□□ 2.52
PNKP-224ENST00000631020 FAM69CQ0P6D2 419 aa30.76■■■□□ 2.51
PNKP-224ENST00000631020 TTBK1Q5TCY1 1321 aaPredicted RBP30.76■■■□□ 2.51
PNKP-224ENST00000631020 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
PNKP-224ENST00000631020 PLB1Q6P1J6 1458 aa30.69■■■□□ 2.5
PNKP-224ENST00000631020 ASXL2Q76L83 1435 aa30.65■■■□□ 2.5
PNKP-224ENST00000631020 GLI2P10070 1586 aa30.61■■■□□ 2.49
PNKP-224ENST00000631020 ZCCHC11Q5TAX3 1644 aaKnown RBP30.6■■■□□ 2.49
PNKP-224ENST00000631020 KIF21BO75037 1637 aa30.59■■■□□ 2.49
PNKP-224ENST00000631020 ABCA8O94911 1581 aa30.57■■■□□ 2.48
PNKP-224ENST00000631020 EHMT2Q96KQ7 1210 aa30.55■■■□□ 2.48
PNKP-224ENST00000631020 SAMD9Q5K651 1589 aa30.53■■■□□ 2.48
PNKP-224ENST00000631020 TSPOAP1O95153 1857 aa30.53■■■□□ 2.48
PNKP-224ENST00000631020 EPRSP07814 1512 aaKnown RBP30.48■■■□□ 2.47
PNKP-224ENST00000631020 KDM6BO15054 1643 aa30.45■■■□□ 2.47
PNKP-224ENST00000631020 WDR7Q9Y4E6 1490 aa30.45■■■□□ 2.46
PNKP-224ENST00000631020 PPRC1Q5VV67 1664 aaKnown RBP30.43■■■□□ 2.46
PNKP-224ENST00000631020 MAP3K4Q9Y6R4 1608 aa30.43■■■□□ 2.46
PNKP-224ENST00000631020 UBTFP17480 764 aaKnown RBP30.39■■■□□ 2.46
PNKP-224ENST00000631020 LOC105371045A0A1W2PR82 267 aa30.36■■■□□ 2.45
PNKP-224ENST00000631020 P3H3Q8IVL6 736 aa30.36■■■□□ 2.45
PNKP-224ENST00000631020 TEX14Q8IWB6 1497 aa30.32■■■□□ 2.44
PNKP-224ENST00000631020 EFCAB5A4FU69 1503 aa30.32■■■□□ 2.44
PNKP-224ENST00000631020 RAPGEF6Q8TEU7 1601 aa30.31■■■□□ 2.44
PNKP-224ENST00000631020 CFAP43Q8NDM7 1665 aa30.29■■■□□ 2.44
PNKP-224ENST00000631020 ATP10BO94823 1461 aa30.28■■■□□ 2.44
PNKP-224ENST00000631020 FHOD3Q2V2M9 1422 aa30.23■■■□□ 2.43
PNKP-224ENST00000631020 MAGI3Q5TCQ9 1506 aa30.22■■■□□ 2.43
PNKP-224ENST00000631020 CD109Q6YHK3 1445 aa30.19■■■□□ 2.42
PNKP-224ENST00000631020 RANGAP1P46060 587 aaPredicted RBP30.19■■■□□ 2.42
PNKP-224ENST00000631020 AEBP2Q6ZN18 517 aaPredicted RBP30.19■■■□□ 2.42
PNKP-224ENST00000631020 NUP153P49790 1475 aaKnown RBP30.18■■■□□ 2.42
PNKP-224ENST00000631020 KCNH8Q96L42 1107 aa30.17■■■□□ 2.42
PNKP-224ENST00000631020 COL17A1Q9UMD9 1497 aaPredicted RBP30.14■■■□□ 2.41
PNKP-224ENST00000631020 ABCA9Q8IUA7 1624 aa30.12■■■□□ 2.41
PNKP-224ENST00000631020 ARID3CA6NKF2 412 aa30.12■■■□□ 2.41
PNKP-224ENST00000631020 ARHGAP35Q9NRY4 1499 aa30.03■■■□□ 2.4
PNKP-224ENST00000631020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.02■■■□□ 2.4
PNKP-224ENST00000631020 HNRNPUL2Q1KMD3 747 aaKnown RBP30.02■■■□□ 2.4
PNKP-224ENST00000631020 FMN1Q68DA7 1419 aa30.02■■■□□ 2.4
PNKP-224ENST00000631020 PHLDB1Q86UU1 1377 aa29.99■■■□□ 2.39
PNKP-224ENST00000631020 ARAP3Q8WWN8 1544 aa29.97■■■□□ 2.39
PNKP-224ENST00000631020 PLEKHD1A6NEE1 506 aa29.96■■■□□ 2.39
PNKP-224ENST00000631020 CLIP1P30622 1438 aa29.95■■■□□ 2.39
PNKP-224ENST00000631020 CEP162Q5TB80 1403 aa29.95■■■□□ 2.39
PNKP-224ENST00000631020 HECW1Q76N89 1606 aa29.93■■■□□ 2.38
PNKP-224ENST00000631020 NEO1Q92859 1461 aa29.92■■■□□ 2.38
PNKP-224ENST00000631020 KDM4FA0A1W2PPD8 638 aa29.91■■■□□ 2.38
PNKP-224ENST00000631020 CDK13Q14004 1512 aaKnown RBP29.88■■■□□ 2.37
PNKP-224ENST00000631020 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.83■■■□□ 2.37
PNKP-224ENST00000631020 CFAP74Q9C0B2 1584 aa29.8■■■□□ 2.36
PNKP-224ENST00000631020 ADGRL1O94910 1474 aa29.8■■■□□ 2.36
PNKP-224ENST00000631020 TTC37Q6PGP7 1564 aa29.78■■■□□ 2.36
PNKP-224ENST00000631020 CDK11AQ9UQ88 783 aaPredicted RBP29.76■■■□□ 2.36
PNKP-224ENST00000631020 FANCAO15360 1455 aa29.73■■■□□ 2.35
PNKP-224ENST00000631020 ATP1B4Q9UN42 357 aaPredicted RBP29.73■■■□□ 2.35
PNKP-224ENST00000631020 LRRIQ1Q96JM4 1722 aa29.73■■■□□ 2.35
PNKP-224ENST00000631020 CASKIN1Q8WXD9 1431 aa29.72■■■□□ 2.35
PNKP-224ENST00000631020 FRMPD1Q5SYB0 1578 aa29.71■■■□□ 2.35
PNKP-224ENST00000631020 AKNAQ7Z591 1439 aa29.69■■■□□ 2.34
PNKP-224ENST00000631020 PCF11O94913 1555 aaKnown RBP29.69■■■□□ 2.34
PNKP-224ENST00000631020 CCDC18Q5T9S5 1454 aa29.68■■■□□ 2.34
PNKP-224ENST00000631020 TROQ12816 1431 aaPredicted RBP29.68■■■□□ 2.34
PNKP-224ENST00000631020 RAPGEF3O95398 923 aa29.67■■■□□ 2.34
PNKP-224ENST00000631020 PLCH2O75038 1416 aa29.67■■■□□ 2.34
PNKP-224ENST00000631020 KIF14Q15058 1648 aa29.66■■■□□ 2.34
PNKP-224ENST00000631020 RICTORQ6R327 1708 aa29.66■■■□□ 2.34
PNKP-224ENST00000631020 DENND4BO75064 1496 aaPredicted RBP29.65■■■□□ 2.34
PNKP-224ENST00000631020 MYO5CQ9NQX4 1742 aa29.65■■■□□ 2.34
PNKP-224ENST00000631020 FYCO1Q9BQS8 1478 aa29.64■■■□□ 2.34
PNKP-224ENST00000631020 ZMYM4Q5VZL5 1548 aa29.58■■■□□ 2.33
PNKP-224ENST00000631020 ARHGEF40Q8TER5 1519 aa29.55■■■□□ 2.32
PNKP-224ENST00000631020 VPS8Q8N3P4 1428 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms