RNA–Protein interactions for RNA: ENST00000630951.1

RAB28-208, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 5 BASIC

Gene RAB28, Length 1,679 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-208ENST00000630951 RUSC2Q8N2Y8 1516 aa36.43■■■■□ 3.42
RAB28-208ENST00000630951 KIAA0586Q9BVV6 1533 aa36.38■■■■□ 3.41
RAB28-208ENST00000630951 PRG4Q92954 1404 aaPredicted RBP36.38■■■■□ 3.41
RAB28-208ENST00000630951 RAPGEF2Q9Y4G8 1499 aa36.23■■■■□ 3.39
RAB28-208ENST00000630951 TRHP20396 242 aaPredicted RBP36.19■■■■□ 3.38
RAB28-208ENST00000630951 IQGAP2Q13576 1575 aa36.08■■■■□ 3.37
RAB28-208ENST00000630951 PRXQ9BXM0 1461 aa36.02■■■■□ 3.36
RAB28-208ENST00000630951 CARMIL2Q6F5E8 1435 aa36.01■■■■□ 3.35
RAB28-208ENST00000630951 CSRNP3Q8WYN3 585 aa35.93■■■■□ 3.34
RAB28-208ENST00000630951 PTPRGP23470 1445 aa35.92■■■■□ 3.34
RAB28-208ENST00000630951 TNIKQ9UKE5 1360 aa35.91■■■■□ 3.34
RAB28-208ENST00000630951 UGGT2Q9NYU1 1516 aa35.91■■■■□ 3.34
RAB28-208ENST00000630951 EEA1Q15075 1411 aa35.9■■■■□ 3.34
RAB28-208ENST00000630951 DISP1Q96F81 1524 aa35.87■■■■□ 3.33
RAB28-208ENST00000630951 NPM1P06748 294 aaKnown RBP eCLIP35.85■■■■□ 3.33
RAB28-208ENST00000630951 ADCY10Q96PN6 1610 aa35.83■■■■□ 3.33
RAB28-208ENST00000630951 CTTNBP2Q8WZ74 1663 aa35.83■■■■□ 3.33
RAB28-208ENST00000630951 CHIC1Q5VXU3 224 aa35.81■■■■□ 3.32
RAB28-208ENST00000630951 TTBK1Q5TCY1 1321 aaPredicted RBP35.77■■■■□ 3.32
RAB28-208ENST00000630951 KIAA0556O60303 1618 aa35.73■■■■□ 3.31
RAB28-208ENST00000630951 MAPKBP1O60336 1514 aa35.72■■■■□ 3.31
RAB28-208ENST00000630951 GOLGA3Q08378 1498 aa35.69■■■■□ 3.3
RAB28-208ENST00000630951 UACAQ9BZF9 1416 aa35.67■■■■□ 3.3
RAB28-208ENST00000630951 UHRF1BP1LA0JNW5 1464 aa35.66■■■■□ 3.3
RAB28-208ENST00000630951 FAM9AQ8IZU1 332 aaPredicted RBP35.66■■■■□ 3.3
RAB28-208ENST00000630951 ABCC2Q92887 1545 aa35.63■■■■□ 3.29
RAB28-208ENST00000630951 ABCC10Q5T3U5 1492 aa35.61■■■■□ 3.29
RAB28-208ENST00000630951 KIF13AQ9H1H9 1805 aa35.58■■■■□ 3.29
RAB28-208ENST00000630951 FAM69CQ0P6D2 419 aa35.55■■■■□ 3.28
RAB28-208ENST00000630951 KIF21BO75037 1637 aa35.5■■■■□ 3.27
RAB28-208ENST00000630951 DIP2BQ9P265 1576 aa35.49■■■■□ 3.27
RAB28-208ENST00000630951 KDM5BQ9UGL1 1544 aa35.49■■■■□ 3.27
RAB28-208ENST00000630951 PLB1Q6P1J6 1458 aa35.44■■■■□ 3.26
RAB28-208ENST00000630951 ASXL2Q76L83 1435 aa35.44■■■■□ 3.26
RAB28-208ENST00000630951 SAMD9Q5K651 1589 aa35.39■■■■□ 3.26
RAB28-208ENST00000630951 ABCA8O94911 1581 aa35.38■■■■□ 3.25
RAB28-208ENST00000630951 P3H3Q8IVL6 736 aa35.38■■■■□ 3.25
RAB28-208ENST00000630951 ZCCHC11Q5TAX3 1644 aaKnown RBP35.34■■■■□ 3.25
RAB28-208ENST00000630951 GLI2P10070 1586 aa35.27■■■■□ 3.24
RAB28-208ENST00000630951 RANGAP1P46060 587 aaPredicted RBP35.27■■■■□ 3.24
RAB28-208ENST00000630951 UBTFP17480 764 aaKnown RBP35.25■■■■□ 3.23
RAB28-208ENST00000630951 EPRSP07814 1512 aaKnown RBP35.22■■■■□ 3.23
RAB28-208ENST00000630951 WDR7Q9Y4E6 1490 aa35.2■■■■□ 3.23
RAB28-208ENST00000630951 EFCAB5A4FU69 1503 aa35.19■■■■□ 3.22
RAB28-208ENST00000630951 EHMT2Q96KQ7 1210 aa35.19■■■■□ 3.22
RAB28-208ENST00000630951 FHOD3Q2V2M9 1422 aa35.16■■■■□ 3.22
RAB28-208ENST00000630951 TSPOAP1O95153 1857 aa35.16■■■■□ 3.22
RAB28-208ENST00000630951 ATP10BO94823 1461 aa35.12■■■■□ 3.21
RAB28-208ENST00000630951 RAPGEF6Q8TEU7 1601 aa35.11■■■■□ 3.21
RAB28-208ENST00000630951 MAP3K4Q9Y6R4 1608 aa35.06■■■■□ 3.2
RAB28-208ENST00000630951 ARID3CA6NKF2 412 aa35.06■■■■□ 3.2
RAB28-208ENST00000630951 KCNH8Q96L42 1107 aa35.04■■■■□ 3.2
RAB28-208ENST00000630951 PPRC1Q5VV67 1664 aaKnown RBP35.03■■■■□ 3.2
RAB28-208ENST00000630951 NUP153P49790 1475 aaKnown RBP35.01■■■■□ 3.2
RAB28-208ENST00000630951 KDM6BO15054 1643 aa35.01■■■■□ 3.2
RAB28-208ENST00000630951 TEX14Q8IWB6 1497 aa34.97■■■■□ 3.19
RAB28-208ENST00000630951 ARHGAP35Q9NRY4 1499 aa34.96■■■■□ 3.19
RAB28-208ENST00000630951 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.94■■■■□ 3.18
RAB28-208ENST00000630951 HNRNPUL2Q1KMD3 747 aaKnown RBP34.94■■■■□ 3.18
RAB28-208ENST00000630951 CD109Q6YHK3 1445 aa34.93■■■■□ 3.18
RAB28-208ENST00000630951 CFAP43Q8NDM7 1665 aa34.91■■■■□ 3.18
RAB28-208ENST00000630951 FMN1Q68DA7 1419 aa34.9■■■■□ 3.18
RAB28-208ENST00000630951 MAGI3Q5TCQ9 1506 aa34.88■■■■□ 3.17
RAB28-208ENST00000630951 PLEKHD1A6NEE1 506 aa34.82■■■■□ 3.16
RAB28-208ENST00000630951 COL17A1Q9UMD9 1497 aaPredicted RBP34.79■■■■□ 3.16
RAB28-208ENST00000630951 ABCA9Q8IUA7 1624 aa34.78■■■■□ 3.16
RAB28-208ENST00000630951 HECW1Q76N89 1606 aa34.71■■■■□ 3.15
RAB28-208ENST00000630951 ATP1B4Q9UN42 357 aaPredicted RBP34.7■■■■□ 3.15
RAB28-208ENST00000630951 CDK13Q14004 1512 aaKnown RBP34.69■■■■□ 3.14
RAB28-208ENST00000630951 PHLDB1Q86UU1 1377 aa34.65■■■■□ 3.14
RAB28-208ENST00000630951 CLIP1P30622 1438 aa34.64■■■■□ 3.14
RAB28-208ENST00000630951 AEBP2Q6ZN18 517 aaPredicted RBP34.62■■■■□ 3.13
RAB28-208ENST00000630951 CDK11AQ9UQ88 783 aaPredicted RBP34.62■■■■□ 3.13
RAB28-208ENST00000630951 ARAP3Q8WWN8 1544 aa34.6■■■■□ 3.13
RAB28-208ENST00000630951 CASKIN1Q8WXD9 1431 aa34.58■■■■□ 3.13
RAB28-208ENST00000630951 NEO1Q92859 1461 aa34.57■■■■□ 3.12
RAB28-208ENST00000630951 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.56■■■■□ 3.12
RAB28-208ENST00000630951 PCF11O94913 1555 aaKnown RBP34.5■■■■□ 3.11
RAB28-208ENST00000630951 TTC37Q6PGP7 1564 aa34.48■■■■□ 3.11
RAB28-208ENST00000630951 CCDC18Q5T9S5 1454 aa34.47■■■■□ 3.11
RAB28-208ENST00000630951 LRRIQ1Q96JM4 1722 aa34.47■■■■□ 3.11
RAB28-208ENST00000630951 TROQ12816 1431 aaPredicted RBP34.46■■■■□ 3.11
RAB28-208ENST00000630951 FYCO1Q9BQS8 1478 aa34.46■■■■□ 3.11
RAB28-208ENST00000630951 FANCAO15360 1455 aa34.43■■■■□ 3.1
RAB28-208ENST00000630951 KDM4FA0A1W2PPD8 638 aa34.42■■■■□ 3.1
RAB28-208ENST00000630951 PLCH2O75038 1416 aa34.4■■■■□ 3.1
RAB28-208ENST00000630951 CEP162Q5TB80 1403 aa34.4■■■■□ 3.1
RAB28-208ENST00000630951 RAPGEF3O95398 923 aa34.39■■■■□ 3.1
RAB28-208ENST00000630951 AKNAQ7Z591 1439 aa34.39■■■■□ 3.1
RAB28-208ENST00000630951 CFAP74Q9C0B2 1584 aa34.38■■■■□ 3.09
RAB28-208ENST00000630951 KIF14Q15058 1648 aa34.37■■■■□ 3.09
RAB28-208ENST00000630951 LOC105371045A0A1W2PR82 267 aa34.33■■■■□ 3.09
RAB28-208ENST00000630951 DENND4BO75064 1496 aaPredicted RBP34.31■■■■□ 3.08
RAB28-208ENST00000630951 EFCAB2Q5VUJ9 269 aa34.28■■■■□ 3.08
RAB28-208ENST00000630951 FRMPD1Q5SYB0 1578 aa34.28■■■■□ 3.08
RAB28-208ENST00000630951 MYO5CQ9NQX4 1742 aa34.27■■■■□ 3.08
RAB28-208ENST00000630951 ADGRL1O94910 1474 aa34.27■■■■□ 3.08
RAB28-208ENST00000630951 RICTORQ6R327 1708 aa34.21■■■■□ 3.07
RAB28-208ENST00000630951 SCAPERQ9BY12 1400 aa34.2■■■■□ 3.06
RAB28-208ENST00000630951 ARHGAP5Q13017 1502 aa34.17■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms