RNA–Protein interactions for RNA: ENST00000630720.3

TCF4-273, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-273ENST00000630720 NCBP3Q53F19 620 aaKnown RBP14.39□□□□□ -0.11
TCF4-273ENST00000630720 FAM9AQ8IZU1 332 aaPredicted RBP14.37□□□□□ -0.11
TCF4-273ENST00000630720 FHAD1B1AJZ9 1412 aa14.36□□□□□ -0.11
TCF4-273ENST00000630720 GRIN2AQ12879 1464 aa14.35□□□□□ -0.11
TCF4-273ENST00000630720 CARMIL1Q5VZK9 1371 aa14.31□□□□□ -0.12
TCF4-273ENST00000630720 CEP170Q5SW79 1584 aa14.31□□□□□ -0.12
TCF4-273ENST00000630720 CUL7Q14999 1698 aa14.3□□□□□ -0.12
TCF4-273ENST00000630720 CLASP1Q7Z460 1538 aa14.28□□□□□ -0.12
TCF4-273ENST00000630720 NUP160Q12769 1436 aa14.27□□□□□ -0.13
TCF4-273ENST00000630720 DMRT2Q9Y5R5 561 aa14.26□□□□□ -0.13
TCF4-273ENST00000630720 CNKSR2Q8WXI2 1034 aa14.25□□□□□ -0.13
TCF4-273ENST00000630720 CSRNP3Q8WYN3 585 aa14.25□□□□□ -0.13
TCF4-273ENST00000630720 RAPGEF2Q9Y4G8 1499 aa14.23□□□□□ -0.13
TCF4-273ENST00000630720 EHMT2Q96KQ7 1210 aa14.22□□□□□ -0.13
TCF4-273ENST00000630720 ARHGEF11O15085 1522 aa14.21□□□□□ -0.13
TCF4-273ENST00000630720 PRXQ9BXM0 1461 aa14.21□□□□□ -0.13
TCF4-273ENST00000630720 RIMBP3CA6NJZ7 1639 aa14.21□□□□□ -0.13
TCF4-273ENST00000630720 RIMBP3BA6NNM3 1639 aa14.21□□□□□ -0.13
TCF4-273ENST00000630720 RIMBP3Q9UFD9 1639 aa14.21□□□□□ -0.13
TCF4-273ENST00000630720 EEA1Q15075 1411 aa14.2□□□□□ -0.14
TCF4-273ENST00000630720 ERCC6L2Q5T890 1561 aa14.18□□□□□ -0.14
TCF4-273ENST00000630720 LOC105371045A0A1W2PR82 267 aa14.16□□□□□ -0.14
TCF4-273ENST00000630720 KIAA0586Q9BVV6 1533 aa14.15□□□□□ -0.14
TCF4-273ENST00000630720 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
TCF4-273ENST00000630720 SHROOM2Q13796 1616 aa14.15□□□□□ -0.15
TCF4-273ENST00000630720 CYB5RLQ6IPT4 315 aa14.13□□□□□ -0.15
TCF4-273ENST00000630720 ARAP1Q96P48 1450 aa14.12□□□□□ -0.15
TCF4-273ENST00000630720 PRG4Q92954 1404 aaPredicted RBP14.12□□□□□ -0.15
TCF4-273ENST00000630720 IQGAP2Q13576 1575 aa14.1□□□□□ -0.15
TCF4-273ENST00000630720 NPM3O75607 178 aaKnown RBP14.09□□□□□ -0.15
TCF4-273ENST00000630720 KIF21BO75037 1637 aa14.08□□□□□ -0.16
TCF4-273ENST00000630720 CTTNBP2Q8WZ74 1663 aa14.08□□□□□ -0.16
TCF4-273ENST00000630720 UBTFP17480 764 aaKnown RBP14.05□□□□□ -0.16
TCF4-273ENST00000630720 RANGAP1P46060 587 aaPredicted RBP14.05□□□□□ -0.16
TCF4-273ENST00000630720 TTBK1Q5TCY1 1321 aaPredicted RBP14.04□□□□□ -0.16
TCF4-273ENST00000630720 DISP1Q96F81 1524 aa14.02□□□□□ -0.16
TCF4-273ENST00000630720 UGGT2Q9NYU1 1516 aa14.02□□□□□ -0.17
TCF4-273ENST00000630720 GOLGA3Q08378 1498 aa14.02□□□□□ -0.17
TCF4-273ENST00000630720 P3H3Q8IVL6 736 aa13.99□□□□□ -0.17
TCF4-273ENST00000630720 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
TCF4-273ENST00000630720 KIAA0556O60303 1618 aa13.97□□□□□ -0.17
TCF4-273ENST00000630720 HRCP23327 699 aa13.97□□□□□ -0.17
TCF4-273ENST00000630720 PCGF6Q9BYE7 350 aa13.96□□□□□ -0.17
TCF4-273ENST00000630720 TNIKQ9UKE5 1360 aa13.95□□□□□ -0.18
TCF4-273ENST00000630720 PTPRGP23470 1445 aa13.95□□□□□ -0.18
TCF4-273ENST00000630720 RNF216Q9NWF9 866 aaPredicted RBP13.93□□□□□ -0.18
TCF4-273ENST00000630720 SAMD9Q5K651 1589 aa13.91□□□□□ -0.18
TCF4-273ENST00000630720 HOXD11P31277 338 aaPredicted RBP13.9□□□□□ -0.18
TCF4-273ENST00000630720 FHOD3Q2V2M9 1422 aa13.89□□□□□ -0.19
TCF4-273ENST00000630720 ADCY10Q96PN6 1610 aa13.89□□□□□ -0.19
TCF4-273ENST00000630720 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
TCF4-273ENST00000630720 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
TCF4-273ENST00000630720 ARHGAP35Q9NRY4 1499 aa13.86□□□□□ -0.19
TCF4-273ENST00000630720 UACAQ9BZF9 1416 aa13.85□□□□□ -0.19
TCF4-273ENST00000630720 CEP162Q5TB80 1403 aa13.83□□□□□ -0.19
TCF4-273ENST00000630720 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.19
TCF4-273ENST00000630720 ARID3CA6NKF2 412 aa13.83□□□□□ -0.2
TCF4-273ENST00000630720 SLC4A1APQ9BWU0 796 aaKnown RBP13.83□□□□□ -0.2
TCF4-273ENST00000630720 ABCA8O94911 1581 aa13.81□□□□□ -0.2
TCF4-273ENST00000630720 ABCC2Q92887 1545 aa13.81□□□□□ -0.2
TCF4-273ENST00000630720 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
TCF4-273ENST00000630720 NPM1P06748 294 aaKnown RBP eCLIP13.79□□□□□ -0.2
TCF4-273ENST00000630720 CLIP1P30622 1438 aa13.79□□□□□ -0.2
TCF4-273ENST00000630720 TRHP20396 242 aaPredicted RBP13.79□□□□□ -0.2
TCF4-273ENST00000630720 KDM5BQ9UGL1 1544 aa13.76□□□□□ -0.21
TCF4-273ENST00000630720 ZCCHC11Q5TAX3 1644 aaKnown RBP13.76□□□□□ -0.21
TCF4-273ENST00000630720 RAPGEF6Q8TEU7 1601 aa13.76□□□□□ -0.21
TCF4-273ENST00000630720 ATP1B4Q9UN42 357 aaPredicted RBP13.74□□□□□ -0.21
TCF4-273ENST00000630720 NUP153P49790 1475 aaKnown RBP13.74□□□□□ -0.21
TCF4-273ENST00000630720 ATP10BO94823 1461 aa13.73□□□□□ -0.21
TCF4-273ENST00000630720 MAPKBP1O60336 1514 aa13.73□□□□□ -0.21
TCF4-273ENST00000630720 ASXL2Q76L83 1435 aa13.72□□□□□ -0.21
TCF4-273ENST00000630720 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
TCF4-273ENST00000630720 KIF13AQ9H1H9 1805 aa13.69□□□□□ -0.22
TCF4-273ENST00000630720 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
TCF4-273ENST00000630720 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
TCF4-273ENST00000630720 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
TCF4-273ENST00000630720 PCF11O94913 1555 aaKnown RBP13.68□□□□□ -0.22
TCF4-273ENST00000630720 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
TCF4-273ENST00000630720 FAM69CQ0P6D2 419 aa13.68□□□□□ -0.22
TCF4-273ENST00000630720 ABCC10Q5T3U5 1492 aa13.67□□□□□ -0.22
TCF4-273ENST00000630720 DIP2BQ9P265 1576 aa13.67□□□□□ -0.22
TCF4-273ENST00000630720 LRRIQ1Q96JM4 1722 aa13.67□□□□□ -0.22
TCF4-273ENST00000630720 KCNH8Q96L42 1107 aa13.66□□□□□ -0.22
TCF4-273ENST00000630720 WDR7Q9Y4E6 1490 aa13.65□□□□□ -0.23
TCF4-273ENST00000630720 EPRSP07814 1512 aaKnown RBP13.64□□□□□ -0.23
TCF4-273ENST00000630720 HECW1Q76N89 1606 aa13.64□□□□□ -0.23
TCF4-273ENST00000630720 CASKIN1Q8WXD9 1431 aa13.64□□□□□ -0.23
TCF4-273ENST00000630720 VPS8Q8N3P4 1428 aa13.62□□□□□ -0.23
TCF4-273ENST00000630720 POTEHQ6S545 545 aa13.61□□□□□ -0.23
TCF4-273ENST00000630720 TSPOAP1O95153 1857 aa13.61□□□□□ -0.23
TCF4-273ENST00000630720 FYCO1Q9BQS8 1478 aa13.6□□□□□ -0.23
TCF4-273ENST00000630720 PLEKHD1A6NEE1 506 aa13.59□□□□□ -0.23
TCF4-273ENST00000630720 APLP2Q06481 763 aa13.59□□□□□ -0.23
TCF4-273ENST00000630720 ZEB1P37275 1124 aaPredicted RBP13.58□□□□□ -0.24
TCF4-273ENST00000630720 GLI2P10070 1586 aa13.57□□□□□ -0.24
TCF4-273ENST00000630720 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
TCF4-273ENST00000630720 MAGI3Q5TCQ9 1506 aa13.56□□□□□ -0.24
TCF4-273ENST00000630720 MAP3K4Q9Y6R4 1608 aa13.55□□□□□ -0.24
TCF4-273ENST00000630720 PPRC1Q5VV67 1664 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms