RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 ERCC6L2Q5T890 1561 aa19.1■□□□□ 0.65
DDX41-219ENST00000629036 CARMIL1Q5VZK9 1371 aa19.02■□□□□ 0.64
DDX41-219ENST00000629036 KIAA0586Q9BVV6 1533 aa18.97■□□□□ 0.63
DDX41-219ENST00000629036 PRXQ9BXM0 1461 aa18.96■□□□□ 0.63
DDX41-219ENST00000629036 RAPGEF2Q9Y4G8 1499 aa18.95■□□□□ 0.62
DDX41-219ENST00000629036 CTTNBP2Q8WZ74 1663 aa18.95■□□□□ 0.62
DDX41-219ENST00000629036 IQGAP2Q13576 1575 aa18.92■□□□□ 0.62
DDX41-219ENST00000629036 KIF13AQ9H1H9 1805 aa18.9■□□□□ 0.62
DDX41-219ENST00000629036 CHIC1Q5VXU3 224 aa18.89■□□□□ 0.61
DDX41-219ENST00000629036 PRG4Q92954 1404 aaPredicted RBP18.89■□□□□ 0.61
DDX41-219ENST00000629036 EEA1Q15075 1411 aa18.85■□□□□ 0.61
DDX41-219ENST00000629036 JPH4Q96JJ6 628 aa18.85■□□□□ 0.61
DDX41-219ENST00000629036 UGGT2Q9NYU1 1516 aa18.84■□□□□ 0.61
DDX41-219ENST00000629036 DISP1Q96F81 1524 aa18.81■□□□□ 0.6
DDX41-219ENST00000629036 KIF21BO75037 1637 aa18.8■□□□□ 0.6
DDX41-219ENST00000629036 KIAA0556O60303 1618 aa18.78■□□□□ 0.6
DDX41-219ENST00000629036 ADCY10Q96PN6 1610 aa18.77■□□□□ 0.6
DDX41-219ENST00000629036 CSRNP3Q8WYN3 585 aa18.75■□□□□ 0.59
DDX41-219ENST00000629036 ILDR1Q86SU0 546 aaPredicted RBP18.72■□□□□ 0.59
DDX41-219ENST00000629036 SAMD9Q5K651 1589 aa18.69■□□□□ 0.58
DDX41-219ENST00000629036 CARMIL2Q6F5E8 1435 aa18.66■□□□□ 0.58
DDX41-219ENST00000629036 TNIKQ9UKE5 1360 aa18.65■□□□□ 0.58
DDX41-219ENST00000629036 TSPOAP1O95153 1857 aa18.65■□□□□ 0.58
DDX41-219ENST00000629036 MAPKBP1O60336 1514 aa18.61■□□□□ 0.57
DDX41-219ENST00000629036 PTPRGP23470 1445 aa18.61■□□□□ 0.57
DDX41-219ENST00000629036 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
DDX41-219ENST00000629036 FAM9AQ8IZU1 332 aaPredicted RBP18.61■□□□□ 0.57
DDX41-219ENST00000629036 UHRF1BP1LA0JNW5 1464 aa18.6■□□□□ 0.57
DDX41-219ENST00000629036 FAM69CQ0P6D2 419 aa18.6■□□□□ 0.57
DDX41-219ENST00000629036 ABCC2Q92887 1545 aa18.59■□□□□ 0.57
DDX41-219ENST00000629036 GOLGA3Q08378 1498 aa18.59■□□□□ 0.57
DDX41-219ENST00000629036 KDM6BO15054 1643 aa18.59■□□□□ 0.57
DDX41-219ENST00000629036 ABCA8O94911 1581 aa18.59■□□□□ 0.57
DDX41-219ENST00000629036 DIP2BQ9P265 1576 aa18.55■□□□□ 0.56
DDX41-219ENST00000629036 ABCC10Q5T3U5 1492 aa18.55■□□□□ 0.56
DDX41-219ENST00000629036 ZCCHC11Q5TAX3 1644 aaKnown RBP18.54■□□□□ 0.56
DDX41-219ENST00000629036 UACAQ9BZF9 1416 aa18.54■□□□□ 0.56
DDX41-219ENST00000629036 KDM5BQ9UGL1 1544 aa18.53■□□□□ 0.56
DDX41-219ENST00000629036 PLB1Q6P1J6 1458 aa18.52■□□□□ 0.56
DDX41-219ENST00000629036 EFCAB5A4FU69 1503 aa18.51■□□□□ 0.55
DDX41-219ENST00000629036 NPM1P06748 294 aaKnown RBP eCLIP18.5■□□□□ 0.55
DDX41-219ENST00000629036 RAPGEF6Q8TEU7 1601 aa18.45■□□□□ 0.54
DDX41-219ENST00000629036 FHOD3Q2V2M9 1422 aa18.43■□□□□ 0.54
DDX41-219ENST00000629036 TTBK1Q5TCY1 1321 aaPredicted RBP18.43■□□□□ 0.54
DDX41-219ENST00000629036 ARHGAP35Q9NRY4 1499 aa18.42■□□□□ 0.54
DDX41-219ENST00000629036 PPRC1Q5VV67 1664 aaKnown RBP18.41■□□□□ 0.54
DDX41-219ENST00000629036 ASXL2Q76L83 1435 aa18.4■□□□□ 0.54
DDX41-219ENST00000629036 GLI2P10070 1586 aa18.39■□□□□ 0.53
DDX41-219ENST00000629036 NUP153P49790 1475 aaKnown RBP18.37■□□□□ 0.53
DDX41-219ENST00000629036 MAP3K4Q9Y6R4 1608 aa18.37■□□□□ 0.53
DDX41-219ENST00000629036 P3H3Q8IVL6 736 aa18.36■□□□□ 0.53
DDX41-219ENST00000629036 LRRIQ1Q96JM4 1722 aa18.36■□□□□ 0.53
DDX41-219ENST00000629036 ADGRL1O94910 1474 aa18.35■□□□□ 0.53
DDX41-219ENST00000629036 EPRSP07814 1512 aaKnown RBP18.34■□□□□ 0.53
DDX41-219ENST00000629036 ATP10BO94823 1461 aa18.34■□□□□ 0.53
DDX41-219ENST00000629036 EHMT2Q96KQ7 1210 aa18.34■□□□□ 0.53
DDX41-219ENST00000629036 HECW2Q9P2P5 1572 aa18.34■□□□□ 0.53
DDX41-219ENST00000629036 WDR7Q9Y4E6 1490 aa18.33■□□□□ 0.53
DDX41-219ENST00000629036 UBTFP17480 764 aaKnown RBP18.32■□□□□ 0.52
DDX41-219ENST00000629036 RANGAP1P46060 587 aaPredicted RBP18.28■□□□□ 0.52
DDX41-219ENST00000629036 CFAP43Q8NDM7 1665 aa18.28■□□□□ 0.52
DDX41-219ENST00000629036 HECW1Q76N89 1606 aa18.26■□□□□ 0.51
DDX41-219ENST00000629036 PCF11O94913 1555 aaKnown RBP18.25■□□□□ 0.51
DDX41-219ENST00000629036 CDK13Q14004 1512 aaKnown RBP18.23■□□□□ 0.51
DDX41-219ENST00000629036 ABCA9Q8IUA7 1624 aa18.23■□□□□ 0.51
DDX41-219ENST00000629036 FMN1Q68DA7 1419 aa18.23■□□□□ 0.51
DDX41-219ENST00000629036 CLIP1P30622 1438 aa18.2■□□□□ 0.5
DDX41-219ENST00000629036 ARID3CA6NKF2 412 aa18.16■□□□□ 0.5
DDX41-219ENST00000629036 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
DDX41-219ENST00000629036 CASKIN1Q8WXD9 1431 aa18.15■□□□□ 0.5
DDX41-219ENST00000629036 MAGI3Q5TCQ9 1506 aa18.15■□□□□ 0.5
DDX41-219ENST00000629036 COL17A1Q9UMD9 1497 aaPredicted RBP18.14■□□□□ 0.5
DDX41-219ENST00000629036 TTC37Q6PGP7 1564 aa18.14■□□□□ 0.49
DDX41-219ENST00000629036 FYCO1Q9BQS8 1478 aa18.14■□□□□ 0.49
DDX41-219ENST00000629036 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.12■□□□□ 0.49
DDX41-219ENST00000629036 KIF14Q15058 1648 aa18.11■□□□□ 0.49
DDX41-219ENST00000629036 TEX14Q8IWB6 1497 aa18.09■□□□□ 0.49
DDX41-219ENST00000629036 CD109Q6YHK3 1445 aa18.09■□□□□ 0.49
DDX41-219ENST00000629036 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
DDX41-219ENST00000629036 CCDC18Q5T9S5 1454 aa18.07■□□□□ 0.48
DDX41-219ENST00000629036 FBXO41Q8TF61 875 aa18.06■□□□□ 0.48
DDX41-219ENST00000629036 KCNH8Q96L42 1107 aa18.04■□□□□ 0.48
DDX41-219ENST00000629036 MYO5CQ9NQX4 1742 aa18.03■□□□□ 0.48
DDX41-219ENST00000629036 TROQ12816 1431 aaPredicted RBP18.02■□□□□ 0.48
DDX41-219ENST00000629036 FRMPD1Q5SYB0 1578 aa18.02■□□□□ 0.48
DDX41-219ENST00000629036 ARAP3Q8WWN8 1544 aa18.01■□□□□ 0.47
DDX41-219ENST00000629036 CDC42BPBQ9Y5S2 1711 aa18■□□□□ 0.47
DDX41-219ENST00000629036 CDC42BPAQ5VT25 1732 aa17.99■□□□□ 0.47
DDX41-219ENST00000629036 RICTORQ6R327 1708 aa17.99■□□□□ 0.47
DDX41-219ENST00000629036 NEO1Q92859 1461 aa17.99■□□□□ 0.47
DDX41-219ENST00000629036 CFAP74Q9C0B2 1584 aa17.99■□□□□ 0.47
DDX41-219ENST00000629036 PREX2Q70Z35 1606 aa17.98■□□□□ 0.47
DDX41-219ENST00000629036 PLEKHD1A6NEE1 506 aa17.97■□□□□ 0.47
DDX41-219ENST00000629036 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
DDX41-219ENST00000629036 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
DDX41-219ENST00000629036 VPS8Q8N3P4 1428 aa17.94■□□□□ 0.46
DDX41-219ENST00000629036 PLCH2O75038 1416 aa17.92■□□□□ 0.46
DDX41-219ENST00000629036 FANCAO15360 1455 aa17.92■□□□□ 0.46
DDX41-219ENST00000629036 TIAM1Q13009 1591 aa17.91■□□□□ 0.46
DDX41-219ENST00000629036 ATP1B4Q9UN42 357 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms