RNA–Protein interactions for RNA: ENST00000628078.2

TCF4-262, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-262ENST00000628078 RUSC2Q8N2Y8 1516 aa23.64■■□□□ 1.37
TCF4-262ENST00000628078 TTBK1Q5TCY1 1321 aaPredicted RBP23.6■■□□□ 1.37
TCF4-262ENST00000628078 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
TCF4-262ENST00000628078 KIF13AQ9H1H9 1805 aa23.59■■□□□ 1.37
TCF4-262ENST00000628078 NPM1P06748 294 aaKnown RBP eCLIP23.58■■□□□ 1.37
TCF4-262ENST00000628078 FAM69CQ0P6D2 419 aa23.55■■□□□ 1.36
TCF4-262ENST00000628078 KIAA0586Q9BVV6 1533 aa23.52■■□□□ 1.36
TCF4-262ENST00000628078 CUL7Q14999 1698 aa23.5■■□□□ 1.35
TCF4-262ENST00000628078 CARMIL1Q5VZK9 1371 aa23.49■■□□□ 1.35
TCF4-262ENST00000628078 ADCY10Q96PN6 1610 aa23.48■■□□□ 1.35
TCF4-262ENST00000628078 ABCC10Q5T3U5 1492 aa23.43■■□□□ 1.34
TCF4-262ENST00000628078 PTPRGP23470 1445 aa23.4■■□□□ 1.34
TCF4-262ENST00000628078 TSPOAP1O95153 1857 aa23.38■■□□□ 1.33
TCF4-262ENST00000628078 MAPKBP1O60336 1514 aa23.38■■□□□ 1.33
TCF4-262ENST00000628078 DIP2BQ9P265 1576 aa23.37■■□□□ 1.33
TCF4-262ENST00000628078 CARMIL2Q6F5E8 1435 aa23.31■■□□□ 1.32
TCF4-262ENST00000628078 TNIKQ9UKE5 1360 aa23.3■■□□□ 1.32
TCF4-262ENST00000628078 IQGAP2Q13576 1575 aa23.3■■□□□ 1.32
TCF4-262ENST00000628078 KDM6BO15054 1643 aa23.22■■□□□ 1.31
TCF4-262ENST00000628078 RAPGEF2Q9Y4G8 1499 aa23.22■■□□□ 1.31
TCF4-262ENST00000628078 DISP1Q96F81 1524 aa23.22■■□□□ 1.31
TCF4-262ENST00000628078 ABCC2Q92887 1545 aa23.21■■□□□ 1.31
TCF4-262ENST00000628078 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
TCF4-262ENST00000628078 UACAQ9BZF9 1416 aa23.17■■□□□ 1.3
TCF4-262ENST00000628078 KDM4FA0A1W2PPD8 638 aa23.12■■□□□ 1.29
TCF4-262ENST00000628078 UGGT2Q9NYU1 1516 aa23.12■■□□□ 1.29
TCF4-262ENST00000628078 UHRF1BP1LA0JNW5 1464 aa23.11■■□□□ 1.29
TCF4-262ENST00000628078 PLB1Q6P1J6 1458 aa23.11■■□□□ 1.29
TCF4-262ENST00000628078 KIAA0556O60303 1618 aa23.09■■□□□ 1.29
TCF4-262ENST00000628078 PPRC1Q5VV67 1664 aaKnown RBP23.07■■□□□ 1.28
TCF4-262ENST00000628078 ZCCHC11Q5TAX3 1644 aaKnown RBP23.06■■□□□ 1.28
TCF4-262ENST00000628078 KDM5BQ9UGL1 1544 aa23.04■■□□□ 1.28
TCF4-262ENST00000628078 GLI2P10070 1586 aa23.04■■□□□ 1.28
TCF4-262ENST00000628078 CTTNBP2Q8WZ74 1663 aa23.03■■□□□ 1.28
TCF4-262ENST00000628078 EPRSP07814 1512 aaKnown RBP23.03■■□□□ 1.28
TCF4-262ENST00000628078 P3H3Q8IVL6 736 aa23■■□□□ 1.27
TCF4-262ENST00000628078 KCNH8Q96L42 1107 aa23■■□□□ 1.27
TCF4-262ENST00000628078 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
TCF4-262ENST00000628078 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
TCF4-262ENST00000628078 MAP3K4Q9Y6R4 1608 aa22.96■■□□□ 1.27
TCF4-262ENST00000628078 PRXQ9BXM0 1461 aa22.93■■□□□ 1.26
TCF4-262ENST00000628078 GOLGA3Q08378 1498 aa22.92■■□□□ 1.26
TCF4-262ENST00000628078 WDR7Q9Y4E6 1490 aa22.91■■□□□ 1.26
TCF4-262ENST00000628078 RANGAP1P46060 587 aaPredicted RBP22.89■■□□□ 1.25
TCF4-262ENST00000628078 ABCA8O94911 1581 aa22.88■■□□□ 1.25
TCF4-262ENST00000628078 TEX14Q8IWB6 1497 aa22.87■■□□□ 1.25
TCF4-262ENST00000628078 CSRNP3Q8WYN3 585 aa22.85■■□□□ 1.25
TCF4-262ENST00000628078 ADGRL1O94910 1474 aa22.85■■□□□ 1.25
TCF4-262ENST00000628078 CD109Q6YHK3 1445 aa22.83■■□□□ 1.25
TCF4-262ENST00000628078 FAM9AQ8IZU1 332 aaPredicted RBP22.82■■□□□ 1.24
TCF4-262ENST00000628078 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.76■■□□□ 1.23
TCF4-262ENST00000628078 HNRNPUL2Q1KMD3 747 aaKnown RBP22.76■■□□□ 1.23
TCF4-262ENST00000628078 CFAP43Q8NDM7 1665 aa22.76■■□□□ 1.23
TCF4-262ENST00000628078 ATP10BO94823 1461 aa22.75■■□□□ 1.23
TCF4-262ENST00000628078 MAGI3Q5TCQ9 1506 aa22.73■■□□□ 1.23
TCF4-262ENST00000628078 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
TCF4-262ENST00000628078 SAMD9Q5K651 1589 aa22.66■■□□□ 1.22
TCF4-262ENST00000628078 RAPGEF6Q8TEU7 1601 aa22.64■■□□□ 1.22
TCF4-262ENST00000628078 FHOD3Q2V2M9 1422 aa22.63■■□□□ 1.21
TCF4-262ENST00000628078 KIF21BO75037 1637 aa22.61■■□□□ 1.21
TCF4-262ENST00000628078 RAPGEF3O95398 923 aa22.61■■□□□ 1.21
TCF4-262ENST00000628078 ABCA9Q8IUA7 1624 aa22.57■■□□□ 1.2
TCF4-262ENST00000628078 HECW2Q9P2P5 1572 aa22.56■■□□□ 1.2
TCF4-262ENST00000628078 NUP153P49790 1475 aaKnown RBP22.56■■□□□ 1.2
TCF4-262ENST00000628078 ARAP3Q8WWN8 1544 aa22.56■■□□□ 1.2
TCF4-262ENST00000628078 EEA1Q15075 1411 aa22.56■■□□□ 1.2
TCF4-262ENST00000628078 ILDR1Q86SU0 546 aaPredicted RBP22.54■■□□□ 1.2
TCF4-262ENST00000628078 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
TCF4-262ENST00000628078 ATP1B4Q9UN42 357 aaPredicted RBP22.49■■□□□ 1.19
TCF4-262ENST00000628078 UBTFP17480 764 aaKnown RBP22.48■■□□□ 1.19
TCF4-262ENST00000628078 ARID4BQ4LE39 1312 aaPredicted RBP22.47■■□□□ 1.19
TCF4-262ENST00000628078 PHLDB1Q86UU1 1377 aa22.46■■□□□ 1.19
TCF4-262ENST00000628078 NEO1Q92859 1461 aa22.45■■□□□ 1.18
TCF4-262ENST00000628078 FRMPD1Q5SYB0 1578 aa22.42■■□□□ 1.18
TCF4-262ENST00000628078 CDK13Q14004 1512 aaKnown RBP22.41■■□□□ 1.18
TCF4-262ENST00000628078 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
TCF4-262ENST00000628078 PLPPR3Q6T4P5 718 aa22.39■■□□□ 1.17
TCF4-262ENST00000628078 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.39■■□□□ 1.17
TCF4-262ENST00000628078 EFCAB5A4FU69 1503 aa22.38■■□□□ 1.17
TCF4-262ENST00000628078 AKNAQ7Z591 1439 aa22.38■■□□□ 1.17
TCF4-262ENST00000628078 ADAMTSL3P82987 1691 aa22.36■■□□□ 1.17
TCF4-262ENST00000628078 FANCAO15360 1455 aa22.36■■□□□ 1.17
TCF4-262ENST00000628078 TTC37Q6PGP7 1564 aa22.36■■□□□ 1.17
TCF4-262ENST00000628078 DENND4BO75064 1496 aaPredicted RBP22.35■■□□□ 1.17
TCF4-262ENST00000628078 PTPRMP28827 1452 aa22.35■■□□□ 1.17
TCF4-262ENST00000628078 BCORL1Q5H9F3 1711 aa22.32■■□□□ 1.16
TCF4-262ENST00000628078 RICTORQ6R327 1708 aa22.32■■□□□ 1.16
TCF4-262ENST00000628078 MADDQ8WXG6 1647 aa22.31■■□□□ 1.16
TCF4-262ENST00000628078 MLECQ14165 292 aa22.29■■□□□ 1.16
TCF4-262ENST00000628078 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
TCF4-262ENST00000628078 CFAP74Q9C0B2 1584 aa22.26■■□□□ 1.15
TCF4-262ENST00000628078 YEATS2Q9ULM3 1422 aa22.26■■□□□ 1.15
TCF4-262ENST00000628078 RIMS1Q86UR5 1692 aaKnown RBP22.26■■□□□ 1.15
TCF4-262ENST00000628078 ARHGEF40Q8TER5 1519 aa22.25■■□□□ 1.15
TCF4-262ENST00000628078 SCAPERQ9BY12 1400 aa22.24■■□□□ 1.15
TCF4-262ENST00000628078 SIGLEC1Q9BZZ2 1709 aa22.23■■□□□ 1.15
TCF4-262ENST00000628078 PLCH2O75038 1416 aa22.23■■□□□ 1.15
TCF4-262ENST00000628078 FMN1Q68DA7 1419 aa22.23■■□□□ 1.15
TCF4-262ENST00000628078 HECW1Q76N89 1606 aa22.21■■□□□ 1.15
TCF4-262ENST00000628078 ZFYVE16Q7Z3T8 1539 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms