RNA–Protein interactions for RNA: ENST00000627529.2

LINC01440-209, Transcript of long intergenic non-protein coding RNA 1440, humanhuman

TSL 5

Gene LINC01440, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01440-209ENST00000627529 WIZO95785 1651 aa11.56□□□□□ -0.56
LINC01440-209ENST00000627529 ATAD2BQ9ULI0 1458 aa11.53□□□□□ -0.56
LINC01440-209ENST00000627529 CC2D2AQ9P2K1 1620 aa11.49□□□□□ -0.57
LINC01440-209ENST00000627529 NCAPD3P42695 1498 aa11.49□□□□□ -0.57
LINC01440-209ENST00000627529 BAZ1BQ9UIG0 1483 aaKnown RBP11.48□□□□□ -0.57
LINC01440-209ENST00000627529 TOP2AP11388 1531 aaKnown RBP11.48□□□□□ -0.57
LINC01440-209ENST00000627529 STAG3Q9UJ98 1225 aa11.47□□□□□ -0.57
LINC01440-209ENST00000627529 HMGXB3Q12766 1538 aa11.46□□□□□ -0.57
LINC01440-209ENST00000627529 DCBLD2Q96PD2 775 aa11.46□□□□□ -0.57
LINC01440-209ENST00000627529 POTEIP0CG38 1075 aa11.45□□□□□ -0.58
LINC01440-209ENST00000627529 ZNF579Q8NAF0 562 aaKnown RBP11.43□□□□□ -0.58
LINC01440-209ENST00000627529 ZRANB1Q9UGI0 708 aa11.41□□□□□ -0.58
LINC01440-209ENST00000627529 CSRNP3Q8WYN3 585 aa11.39□□□□□ -0.59
LINC01440-209ENST00000627529 CREBZFQ9NS37 354 aa11.37□□□□□ -0.59
LINC01440-209ENST00000627529 CCDC88BA6NC98 1476 aa11.34□□□□□ -0.59
LINC01440-209ENST00000627529 PAK3O75914 559 aaPredicted RBP11.34□□□□□ -0.59
LINC01440-209ENST00000627529 SPDYE4A6NLX3 237 aa11.29□□□□□ -0.6
LINC01440-209ENST00000627529 GALR2O43603 387 aaPredicted RBP11.26□□□□□ -0.61
LINC01440-209ENST00000627529 NPM1P06748 294 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC01440-209ENST00000627529 CADPSQ9ULU8 1353 aa11.18□□□□□ -0.62
LINC01440-209ENST00000627529 PHF12Q96QT6 1004 aa11.17□□□□□ -0.62
LINC01440-209ENST00000627529 PLSCR2Q9NRY7 297 aa11.17□□□□□ -0.62
LINC01440-209ENST00000627529 CFTRP13569 1480 aa11.17□□□□□ -0.62
LINC01440-209ENST00000627529 LAMC3Q9Y6N6 1575 aa11.15□□□□□ -0.62
LINC01440-209ENST00000627529 PRDM2Q13029 1718 aa11.14□□□□□ -0.63
LINC01440-209ENST00000627529 OTUD5Q96G74 571 aa11.12□□□□□ -0.63
LINC01440-209ENST00000627529 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
LINC01440-209ENST00000627529 MNX1P50219 401 aaPredicted RBP11.1□□□□□ -0.63
LINC01440-209ENST00000627529 PDS5BQ9NTI5 1447 aa11.08□□□□□ -0.64
LINC01440-209ENST00000627529 POTEB2H3BUK9 544 aa11.06□□□□□ -0.64
LINC01440-209ENST00000627529 TRIM41Q8WV44 630 aa11.06□□□□□ -0.64
LINC01440-209ENST00000627529 NESP48681 1621 aa11.06□□□□□ -0.64
LINC01440-209ENST00000627529 ASTLQ6HA08 431 aaPredicted RBP11.04□□□□□ -0.64
LINC01440-209ENST00000627529 SLC39A7Q92504 469 aa11.04□□□□□ -0.64
LINC01440-209ENST00000627529 MS4A3Q96HJ5 214 aa11.04□□□□□ -0.64
LINC01440-209ENST00000627529 FANCD2Q9BXW9 1451 aa11.04□□□□□ -0.64
LINC01440-209ENST00000627529 METRNQ9UJH8 293 aa11.03□□□□□ -0.64
LINC01440-209ENST00000627529 WRNQ14191 1432 aaPredicted RBP eCLIP11.02□□□□□ -0.64
LINC01440-209ENST00000627529 C7P10643 843 aa11.02□□□□□ -0.65
LINC01440-209ENST00000627529 PELP1Q8IZL8 1130 aaKnown RBP11.02□□□□□ -0.65
LINC01440-209ENST00000627529 ABCC8Q09428 1581 aa11.01□□□□□ -0.65
LINC01440-209ENST00000627529 CEP164Q9UPV0 1460 aa11□□□□□ -0.65
LINC01440-209ENST00000627529 POTEMA6NI47 508 aa11□□□□□ -0.65
LINC01440-209ENST00000627529 ATMINO43313 823 aaPredicted RBP10.99□□□□□ -0.65
LINC01440-209ENST00000627529 MAMSTRQ6ZN01 415 aa10.99□□□□□ -0.65
LINC01440-209ENST00000627529 TSPYL2Q9H2G4 693 aaPredicted RBP10.97□□□□□ -0.65
LINC01440-209ENST00000627529 POTEGQ6S5H5 508 aa10.96□□□□□ -0.65
LINC01440-209ENST00000627529 KIF21AQ7Z4S6 1674 aa10.95□□□□□ -0.66
LINC01440-209ENST00000627529 TOP2BQ02880 1626 aa10.95□□□□□ -0.66
LINC01440-209ENST00000627529 ERCC6Q03468 1493 aa10.95□□□□□ -0.66
LINC01440-209ENST00000627529 PLEKHG5O94827 1062 aa10.95□□□□□ -0.66
LINC01440-209ENST00000627529 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
LINC01440-209ENST00000627529 PROM2Q8N271 834 aa10.94□□□□□ -0.66
LINC01440-209ENST00000627529 SYNJ1O43426 1573 aa10.93□□□□□ -0.66
LINC01440-209ENST00000627529 DNMBPQ6XZF7 1577 aa10.92□□□□□ -0.66
LINC01440-209ENST00000627529 PCDH10Q9P2E7 1040 aa10.92□□□□□ -0.66
LINC01440-209ENST00000627529 CCDC61Q9Y6R9 512 aa10.92□□□□□ -0.66
LINC01440-209ENST00000627529 CUX1P39880 1505 aa10.92□□□□□ -0.66
LINC01440-209ENST00000627529 SCUBE2Q9NQ36 999 aa10.91□□□□□ -0.66
LINC01440-209ENST00000627529 MRC2Q9UBG0 1479 aa10.91□□□□□ -0.66
LINC01440-209ENST00000627529 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
LINC01440-209ENST00000627529 URB2Q14146 1524 aaKnown RBP10.88□□□□□ -0.67
LINC01440-209ENST00000627529 ATN1P54259 1190 aaPredicted RBP10.87□□□□□ -0.67
LINC01440-209ENST00000627529 KIF12Q96FN5 646 aa10.87□□□□□ -0.67
LINC01440-209ENST00000627529 FGD5Q6ZNL6 1462 aa10.85□□□□□ -0.67
LINC01440-209ENST00000627529 EEA1Q15075 1411 aa10.84□□□□□ -0.67
LINC01440-209ENST00000627529 POTEJP0CG39 1038 aa10.84□□□□□ -0.67
LINC01440-209ENST00000627529 WDR62O43379 1518 aa10.84□□□□□ -0.67
LINC01440-209ENST00000627529 TIE1P35590 1138 aa10.83□□□□□ -0.68
LINC01440-209ENST00000627529 POLA1P09884 1462 aaPredicted RBP10.82□□□□□ -0.68
LINC01440-209ENST00000627529 MIER1Q8N108 512 aa10.82□□□□□ -0.68
LINC01440-209ENST00000627529 BMP2KQ9NSY1 1161 aaPredicted RBP10.82□□□□□ -0.68
LINC01440-209ENST00000627529 SOGA1O94964 1423 aa10.82□□□□□ -0.68
LINC01440-209ENST00000627529 THOC2Q8NI27 1593 aaKnown RBP10.82□□□□□ -0.68
LINC01440-209ENST00000627529 KIF27Q86VH2 1401 aa10.79□□□□□ -0.68
LINC01440-209ENST00000627529 MAP3K13O43283 966 aa10.79□□□□□ -0.68
LINC01440-209ENST00000627529 FAM9AQ8IZU1 332 aaPredicted RBP10.78□□□□□ -0.68
LINC01440-209ENST00000627529 ABCA10Q8WWZ4 1543 aa10.78□□□□□ -0.68
LINC01440-209ENST00000627529 IFT140Q96RY7 1462 aa10.77□□□□□ -0.69
LINC01440-209ENST00000627529 FAM163AQ96GL9 167 aaPredicted RBP10.77□□□□□ -0.69
LINC01440-209ENST00000627529 CUX2O14529 1486 aa10.76□□□□□ -0.69
LINC01440-209ENST00000627529 RAD54L2Q9Y4B4 1467 aa10.76□□□□□ -0.69
LINC01440-209ENST00000627529 SEC24BO95487 1268 aa10.75□□□□□ -0.69
LINC01440-209ENST00000627529 RASEFQ8IZ41 740 aa10.75□□□□□ -0.69
LINC01440-209ENST00000627529 TRPC6Q9Y210 931 aa10.74□□□□□ -0.69
LINC01440-209ENST00000627529 TARBP1Q13395 1621 aaKnown RBP10.73□□□□□ -0.69
LINC01440-209ENST00000627529 POTEFA5A3E0 1075 aa10.73□□□□□ -0.69
LINC01440-209ENST00000627529 PLCD3Q8N3E9 789 aa10.73□□□□□ -0.69
LINC01440-209ENST00000627529 SGIP1Q9BQI5 828 aa10.73□□□□□ -0.69
LINC01440-209ENST00000627529 ZBTB47Q9UFB7 747 aaPredicted RBP10.73□□□□□ -0.69
LINC01440-209ENST00000627529 RUSC2Q8N2Y8 1516 aa10.73□□□□□ -0.69
LINC01440-209ENST00000627529 WDR97A6NE52 1622 aa10.73□□□□□ -0.69
LINC01440-209ENST00000627529 TTLL13PA6NNM8 815 aa10.72□□□□□ -0.69
LINC01440-209ENST00000627529 LCE2DQ5TA82 110 aaPredicted RBP10.71□□□□□ -0.69
LINC01440-209ENST00000627529 IER5LQ5T953 404 aa10.7□□□□□ -0.7
LINC01440-209ENST00000627529 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
LINC01440-209ENST00000627529 TDRD9Q8NDG6 1382 aaKnown RBP10.68□□□□□ -0.7
LINC01440-209ENST00000627529 PCDHB13Q9Y5F0 798 aa10.68□□□□□ -0.7
LINC01440-209ENST00000627529 ABCA5Q8WWZ7 1642 aa10.68□□□□□ -0.7
LINC01440-209ENST00000627529 IGF1RP08069 1367 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms