RNA–Protein interactions for RNA: ENST00000627282.2

CNOT9-209, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 2 BASIC

Gene CNOT9, Length 1,621 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-209ENST00000627282 FAM9AQ8IZU1 332 aaPredicted RBP31.65■■■□□ 2.66
CNOT9-209ENST00000627282 CSRNP3Q8WYN3 585 aa31.62■■■□□ 2.65
CNOT9-209ENST00000627282 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
CNOT9-209ENST00000627282 PRXQ9BXM0 1461 aa31.56■■■□□ 2.64
CNOT9-209ENST00000627282 ERCC6L2Q5T890 1561 aa31.54■■■□□ 2.64
CNOT9-209ENST00000627282 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
CNOT9-209ENST00000627282 KIAA0586Q9BVV6 1533 aa31.47■■■□□ 2.63
CNOT9-209ENST00000627282 JPH4Q96JJ6 628 aa31.47■■■□□ 2.63
CNOT9-209ENST00000627282 PRG4Q92954 1404 aaPredicted RBP31.45■■■□□ 2.63
CNOT9-209ENST00000627282 KIF21BO75037 1637 aa31.35■■■□□ 2.61
CNOT9-209ENST00000627282 IQGAP2Q13576 1575 aa31.26■■■□□ 2.6
CNOT9-209ENST00000627282 EHMT2Q96KQ7 1210 aa31.21■■■□□ 2.59
CNOT9-209ENST00000627282 GOLGA3Q08378 1498 aa31.21■■■□□ 2.59
CNOT9-209ENST00000627282 CTTNBP2Q8WZ74 1663 aa31.16■■■□□ 2.58
CNOT9-209ENST00000627282 TRHP20396 242 aaPredicted RBP31.13■■■□□ 2.57
CNOT9-209ENST00000627282 CARMIL2Q6F5E8 1435 aa31.13■■■□□ 2.57
CNOT9-209ENST00000627282 UGGT2Q9NYU1 1516 aa31.09■■■□□ 2.57
CNOT9-209ENST00000627282 UBTFP17480 764 aaKnown RBP31.08■■■□□ 2.57
CNOT9-209ENST00000627282 DISP1Q96F81 1524 aa31.07■■■□□ 2.56
CNOT9-209ENST00000627282 TNIKQ9UKE5 1360 aa31.04■■■□□ 2.56
CNOT9-209ENST00000627282 PTPRGP23470 1445 aa31.04■■■□□ 2.56
CNOT9-209ENST00000627282 ADCY10Q96PN6 1610 aa31.01■■■□□ 2.55
CNOT9-209ENST00000627282 KIAA0556O60303 1618 aa30.97■■■□□ 2.55
CNOT9-209ENST00000627282 LOC105371045A0A1W2PR82 267 aa30.95■■■□□ 2.55
CNOT9-209ENST00000627282 TTBK1Q5TCY1 1321 aaPredicted RBP30.93■■■□□ 2.54
CNOT9-209ENST00000627282 NPM1P06748 294 aaKnown RBP eCLIP30.91■■■□□ 2.54
CNOT9-209ENST00000627282 RANGAP1P46060 587 aaPredicted RBP30.87■■■□□ 2.53
CNOT9-209ENST00000627282 MAPKBP1O60336 1514 aa30.86■■■□□ 2.53
CNOT9-209ENST00000627282 UACAQ9BZF9 1416 aa30.83■■■□□ 2.53
CNOT9-209ENST00000627282 UHRF1BP1LA0JNW5 1464 aa30.83■■■□□ 2.53
CNOT9-209ENST00000627282 SAMD9Q5K651 1589 aa30.83■■■□□ 2.53
CNOT9-209ENST00000627282 ABCC2Q92887 1545 aa30.81■■■□□ 2.52
CNOT9-209ENST00000627282 P3H3Q8IVL6 736 aa30.76■■■□□ 2.52
CNOT9-209ENST00000627282 EFCAB5A4FU69 1503 aa30.75■■■□□ 2.51
CNOT9-209ENST00000627282 KIF13AQ9H1H9 1805 aa30.75■■■□□ 2.51
CNOT9-209ENST00000627282 ABCC10Q5T3U5 1492 aa30.74■■■□□ 2.51
CNOT9-209ENST00000627282 ARHGAP35Q9NRY4 1499 aa30.72■■■□□ 2.51
CNOT9-209ENST00000627282 FHOD3Q2V2M9 1422 aa30.69■■■□□ 2.5
CNOT9-209ENST00000627282 KDM5BQ9UGL1 1544 aa30.69■■■□□ 2.5
CNOT9-209ENST00000627282 DIP2BQ9P265 1576 aa30.68■■■□□ 2.5
CNOT9-209ENST00000627282 PLB1Q6P1J6 1458 aa30.68■■■□□ 2.5
CNOT9-209ENST00000627282 CLIP1P30622 1438 aa30.67■■■□□ 2.5
CNOT9-209ENST00000627282 FAM69CQ0P6D2 419 aa30.66■■■□□ 2.5
CNOT9-209ENST00000627282 CEP162Q5TB80 1403 aa30.66■■■□□ 2.5
CNOT9-209ENST00000627282 ABCA8O94911 1581 aa30.65■■■□□ 2.5
CNOT9-209ENST00000627282 ASXL2Q76L83 1435 aa30.64■■■□□ 2.49
CNOT9-209ENST00000627282 ZCCHC11Q5TAX3 1644 aaKnown RBP30.6■■■□□ 2.49
CNOT9-209ENST00000627282 GLI2P10070 1586 aa30.48■■■□□ 2.47
CNOT9-209ENST00000627282 FMN1Q68DA7 1419 aa30.46■■■□□ 2.47
CNOT9-209ENST00000627282 EPRSP07814 1512 aaKnown RBP30.45■■■□□ 2.47
CNOT9-209ENST00000627282 WDR7Q9Y4E6 1490 aa30.45■■■□□ 2.46
CNOT9-209ENST00000627282 RAPGEF6Q8TEU7 1601 aa30.43■■■□□ 2.46
CNOT9-209ENST00000627282 TSPOAP1O95153 1857 aa30.39■■■□□ 2.45
CNOT9-209ENST00000627282 ATP10BO94823 1461 aa30.38■■■□□ 2.45
CNOT9-209ENST00000627282 NUP153P49790 1475 aaKnown RBP30.36■■■□□ 2.45
CNOT9-209ENST00000627282 ARID3CA6NKF2 412 aa30.35■■■□□ 2.45
CNOT9-209ENST00000627282 MAP3K4Q9Y6R4 1608 aa30.33■■■□□ 2.45
CNOT9-209ENST00000627282 PCF11O94913 1555 aaKnown RBP30.31■■■□□ 2.44
CNOT9-209ENST00000627282 PPRC1Q5VV67 1664 aaKnown RBP30.3■■■□□ 2.44
CNOT9-209ENST00000627282 CASKIN1Q8WXD9 1431 aa30.3■■■□□ 2.44
CNOT9-209ENST00000627282 HECW1Q76N89 1606 aa30.26■■■□□ 2.44
CNOT9-209ENST00000627282 KCNH8Q96L42 1107 aa30.25■■■□□ 2.43
CNOT9-209ENST00000627282 VPS8Q8N3P4 1428 aa30.25■■■□□ 2.43
CNOT9-209ENST00000627282 ATP1B4Q9UN42 357 aaPredicted RBP30.25■■■□□ 2.43
CNOT9-209ENST00000627282 FYCO1Q9BQS8 1478 aa30.24■■■□□ 2.43
CNOT9-209ENST00000627282 KDM6BO15054 1643 aa30.23■■■□□ 2.43
CNOT9-209ENST00000627282 CFAP43Q8NDM7 1665 aa30.2■■■□□ 2.43
CNOT9-209ENST00000627282 TEX14Q8IWB6 1497 aa30.2■■■□□ 2.43
CNOT9-209ENST00000627282 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.2■■■□□ 2.43
CNOT9-209ENST00000627282 HNRNPUL2Q1KMD3 747 aaKnown RBP30.2■■■□□ 2.43
CNOT9-209ENST00000627282 CDK13Q14004 1512 aaKnown RBP30.2■■■□□ 2.42
CNOT9-209ENST00000627282 LRRIQ1Q96JM4 1722 aa30.18■■■□□ 2.42
CNOT9-209ENST00000627282 CD109Q6YHK3 1445 aa30.17■■■□□ 2.42
CNOT9-209ENST00000627282 MAGI3Q5TCQ9 1506 aa30.14■■■□□ 2.42
CNOT9-209ENST00000627282 ABCA9Q8IUA7 1624 aa30.1■■■□□ 2.41
CNOT9-209ENST00000627282 CCDC18Q5T9S5 1454 aa30.1■■■□□ 2.41
CNOT9-209ENST00000627282 PLEKHD1A6NEE1 506 aa30.08■■■□□ 2.41
CNOT9-209ENST00000627282 COL17A1Q9UMD9 1497 aaPredicted RBP30.05■■■□□ 2.4
CNOT9-209ENST00000627282 CDK11AQ9UQ88 783 aaPredicted RBP29.97■■■□□ 2.39
CNOT9-209ENST00000627282 TROQ12816 1431 aaPredicted RBP29.94■■■□□ 2.38
CNOT9-209ENST00000627282 TIAM1Q13009 1591 aa29.94■■■□□ 2.38
CNOT9-209ENST00000627282 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.93■■■□□ 2.38
CNOT9-209ENST00000627282 MAP3K1Q13233 1512 aa29.91■■■□□ 2.38
CNOT9-209ENST00000627282 PHLDB1Q86UU1 1377 aa29.9■■■□□ 2.38
CNOT9-209ENST00000627282 TTC37Q6PGP7 1564 aa29.9■■■□□ 2.38
CNOT9-209ENST00000627282 ARAP3Q8WWN8 1544 aa29.89■■■□□ 2.38
CNOT9-209ENST00000627282 NEO1Q92859 1461 aa29.89■■■□□ 2.38
CNOT9-209ENST00000627282 MTUS2Q5JR59 1369 aa29.85■■■□□ 2.37
CNOT9-209ENST00000627282 KIF14Q15058 1648 aa29.84■■■□□ 2.37
CNOT9-209ENST00000627282 APLP2Q06481 763 aa29.82■■■□□ 2.36
CNOT9-209ENST00000627282 KANK4Q5T7N3 995 aaPredicted RBP29.82■■■□□ 2.36
CNOT9-209ENST00000627282 LRRC9Q6ZRR7 1453 aa29.81■■■□□ 2.36
CNOT9-209ENST00000627282 EHBP1L1Q8N3D4 1523 aa29.81■■■□□ 2.36
CNOT9-209ENST00000627282 FANCAO15360 1455 aa29.78■■■□□ 2.36
CNOT9-209ENST00000627282 CFAP74Q9C0B2 1584 aa29.77■■■□□ 2.36
CNOT9-209ENST00000627282 PLCH2O75038 1416 aa29.75■■■□□ 2.35
CNOT9-209ENST00000627282 AKNAQ7Z591 1439 aa29.74■■■□□ 2.35
CNOT9-209ENST00000627282 AEBP2Q6ZN18 517 aaPredicted RBP29.71■■■□□ 2.35
CNOT9-209ENST00000627282 RAPGEF3O95398 923 aa29.71■■■□□ 2.35
CNOT9-209ENST00000627282 MYO5CQ9NQX4 1742 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms