RNA–Protein interactions for RNA: ENST00000627238.1

TRIM29-221, Transcript of tripartite motif containing 29, humanhuman

TSL 5 BASIC

Gene TRIM29, Length 510 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-221ENST00000627238 CUL7Q14999 1698 aa29.12■■■□□ 2.25
TRIM29-221ENST00000627238 IGF1RP08069 1367 aa29.12■■■□□ 2.25
TRIM29-221ENST00000627238 KIF27Q86VH2 1401 aa29.11■■■□□ 2.25
TRIM29-221ENST00000627238 KIAA0586Q9BVV6 1533 aa29.1■■■□□ 2.25
TRIM29-221ENST00000627238 MAPKBP1O60336 1514 aa29.04■■■□□ 2.24
TRIM29-221ENST00000627238 ABCC10Q5T3U5 1492 aa28.99■■■□□ 2.23
TRIM29-221ENST00000627238 ADCY10Q96PN6 1610 aa28.99■■■□□ 2.23
TRIM29-221ENST00000627238 AEBP2Q6ZN18 517 aaPredicted RBP28.94■■■□□ 2.22
TRIM29-221ENST00000627238 DIP2BQ9P265 1576 aa28.92■■■□□ 2.22
TRIM29-221ENST00000627238 NPM1P06748 294 aaKnown RBP eCLIP28.91■■■□□ 2.22
TRIM29-221ENST00000627238 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
TRIM29-221ENST00000627238 FAM69CQ0P6D2 419 aa28.85■■■□□ 2.21
TRIM29-221ENST00000627238 PTPRGP23470 1445 aa28.78■■■□□ 2.2
TRIM29-221ENST00000627238 IQGAP2Q13576 1575 aa28.78■■■□□ 2.2
TRIM29-221ENST00000627238 CARMIL2Q6F5E8 1435 aa28.77■■■□□ 2.2
TRIM29-221ENST00000627238 TNIKQ9UKE5 1360 aa28.76■■■□□ 2.2
TRIM29-221ENST00000627238 ABCC2Q92887 1545 aa28.71■■■□□ 2.19
TRIM29-221ENST00000627238 UHRF1BP1LA0JNW5 1464 aa28.69■■■□□ 2.18
TRIM29-221ENST00000627238 DISP1Q96F81 1524 aa28.67■■■□□ 2.18
TRIM29-221ENST00000627238 KDM6BO15054 1643 aa28.65■■■□□ 2.18
TRIM29-221ENST00000627238 RAPGEF2Q9Y4G8 1499 aa28.65■■■□□ 2.18
TRIM29-221ENST00000627238 UGGT2Q9NYU1 1516 aa28.64■■■□□ 2.17
TRIM29-221ENST00000627238 GLI2P10070 1586 aa28.62■■■□□ 2.17
TRIM29-221ENST00000627238 PLB1Q6P1J6 1458 aa28.61■■■□□ 2.17
TRIM29-221ENST00000627238 TSPOAP1O95153 1857 aa28.6■■■□□ 2.17
TRIM29-221ENST00000627238 UACAQ9BZF9 1416 aa28.6■■■□□ 2.17
TRIM29-221ENST00000627238 ASXL2Q76L83 1435 aa28.58■■■□□ 2.17
TRIM29-221ENST00000627238 KDM5BQ9UGL1 1544 aa28.54■■■□□ 2.16
TRIM29-221ENST00000627238 KIAA0556O60303 1618 aa28.53■■■□□ 2.16
TRIM29-221ENST00000627238 PPRC1Q5VV67 1664 aaKnown RBP28.52■■■□□ 2.16
TRIM29-221ENST00000627238 TTBK1Q5TCY1 1321 aaPredicted RBP28.49■■■□□ 2.15
TRIM29-221ENST00000627238 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.14
TRIM29-221ENST00000627238 EPRSP07814 1512 aaKnown RBP28.44■■■□□ 2.14
TRIM29-221ENST00000627238 ZCCHC11Q5TAX3 1644 aaKnown RBP28.43■■■□□ 2.14
TRIM29-221ENST00000627238 MAP3K4Q9Y6R4 1608 aa28.43■■■□□ 2.14
TRIM29-221ENST00000627238 KDM4FA0A1W2PPD8 638 aa28.39■■■□□ 2.14
TRIM29-221ENST00000627238 PRXQ9BXM0 1461 aa28.36■■■□□ 2.13
TRIM29-221ENST00000627238 GOLGA3Q08378 1498 aa28.35■■■□□ 2.13
TRIM29-221ENST00000627238 TEX14Q8IWB6 1497 aa28.34■■■□□ 2.13
TRIM29-221ENST00000627238 WDR7Q9Y4E6 1490 aa28.31■■■□□ 2.12
TRIM29-221ENST00000627238 ABCA8O94911 1581 aa28.29■■■□□ 2.12
TRIM29-221ENST00000627238 COL17A1Q9UMD9 1497 aaPredicted RBP28.29■■■□□ 2.12
TRIM29-221ENST00000627238 CFAP43Q8NDM7 1665 aa28.19■■■□□ 2.1
TRIM29-221ENST00000627238 MAGI3Q5TCQ9 1506 aa28.19■■■□□ 2.1
TRIM29-221ENST00000627238 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
TRIM29-221ENST00000627238 CD109Q6YHK3 1445 aa28.11■■■□□ 2.09
TRIM29-221ENST00000627238 SAMD9Q5K651 1589 aa28.07■■■□□ 2.08
TRIM29-221ENST00000627238 ATP10BO94823 1461 aa28.02■■■□□ 2.08
TRIM29-221ENST00000627238 CSRNP3Q8WYN3 585 aa28.01■■■□□ 2.07
TRIM29-221ENST00000627238 KCNH8Q96L42 1107 aa28■■■□□ 2.07
TRIM29-221ENST00000627238 FAM9AQ8IZU1 332 aaPredicted RBP27.99■■■□□ 2.07
TRIM29-221ENST00000627238 EEA1Q15075 1411 aa27.98■■■□□ 2.07
TRIM29-221ENST00000627238 ARAP3Q8WWN8 1544 aa27.97■■■□□ 2.07
TRIM29-221ENST00000627238 ABCA9Q8IUA7 1624 aa27.96■■■□□ 2.07
TRIM29-221ENST00000627238 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
TRIM29-221ENST00000627238 PHLDB1Q86UU1 1377 aa27.92■■■□□ 2.06
TRIM29-221ENST00000627238 P3H3Q8IVL6 736 aa27.9■■■□□ 2.06
TRIM29-221ENST00000627238 NUP153P49790 1475 aaKnown RBP27.83■■■□□ 2.05
TRIM29-221ENST00000627238 NEO1Q92859 1461 aa27.83■■■□□ 2.04
TRIM29-221ENST00000627238 HECW2Q9P2P5 1572 aa27.82■■■□□ 2.04
TRIM29-221ENST00000627238 KIF21BO75037 1637 aa27.81■■■□□ 2.04
TRIM29-221ENST00000627238 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
TRIM29-221ENST00000627238 EFCAB5A4FU69 1503 aa27.76■■■□□ 2.03
TRIM29-221ENST00000627238 FHOD3Q2V2M9 1422 aa27.75■■■□□ 2.03
TRIM29-221ENST00000627238 FRMPD1Q5SYB0 1578 aa27.7■■■□□ 2.03
TRIM29-221ENST00000627238 ADAMTSL3P82987 1691 aa27.68■■■□□ 2.02
TRIM29-221ENST00000627238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.66■■■□□ 2.02
TRIM29-221ENST00000627238 HNRNPUL2Q1KMD3 747 aaKnown RBP27.66■■■□□ 2.02
TRIM29-221ENST00000627238 RAPGEF3O95398 923 aa27.64■■■□□ 2.02
TRIM29-221ENST00000627238 PLEKHD1A6NEE1 506 aa27.63■■■□□ 2.01
TRIM29-221ENST00000627238 CFAP74Q9C0B2 1584 aa27.62■■■□□ 2.01
TRIM29-221ENST00000627238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.61■■■□□ 2.01
TRIM29-221ENST00000627238 ILDR1Q86SU0 546 aaPredicted RBP27.6■■■□□ 2.01
TRIM29-221ENST00000627238 RICTORQ6R327 1708 aa27.6■■■□□ 2.01
TRIM29-221ENST00000627238 BCORL1Q5H9F3 1711 aa27.58■■■□□ 2.01
TRIM29-221ENST00000627238 PTPRMP28827 1452 aa27.58■■■□□ 2.01
TRIM29-221ENST00000627238 ARHGEF40Q8TER5 1519 aa27.57■■■□□ 2
TRIM29-221ENST00000627238 DENND4BO75064 1496 aaPredicted RBP27.57■■■□□ 2
TRIM29-221ENST00000627238 RANGAP1P46060 587 aaPredicted RBP27.56■■■□□ 2
TRIM29-221ENST00000627238 AKNAQ7Z591 1439 aa27.56■■■□□ 2
TRIM29-221ENST00000627238 FANCAO15360 1455 aa27.56■■■□□ 2
TRIM29-221ENST00000627238 TTC37Q6PGP7 1564 aa27.55■■■□□ 2
TRIM29-221ENST00000627238 ZMYM4Q5VZL5 1548 aa27.53■■■□□ 2
TRIM29-221ENST00000627238 CDK13Q14004 1512 aaKnown RBP27.49■■□□□ 1.99
TRIM29-221ENST00000627238 MADDQ8WXG6 1647 aa27.49■■□□□ 1.99
TRIM29-221ENST00000627238 FMN1Q68DA7 1419 aa27.47■■□□□ 1.99
TRIM29-221ENST00000627238 MAGI2Q86UL8 1455 aa27.46■■□□□ 1.99
TRIM29-221ENST00000627238 HECW1Q76N89 1606 aa27.45■■□□□ 1.98
TRIM29-221ENST00000627238 PLCH2O75038 1416 aa27.43■■□□□ 1.98
TRIM29-221ENST00000627238 ARHGAP35Q9NRY4 1499 aa27.43■■□□□ 1.98
TRIM29-221ENST00000627238 ZFYVE16Q7Z3T8 1539 aa27.41■■□□□ 1.98
TRIM29-221ENST00000627238 ARID4BQ4LE39 1312 aaPredicted RBP27.41■■□□□ 1.98
TRIM29-221ENST00000627238 PCF11O94913 1555 aaKnown RBP27.39■■□□□ 1.97
TRIM29-221ENST00000627238 POGZQ7Z3K3 1410 aa27.38■■□□□ 1.97
TRIM29-221ENST00000627238 SIGLEC1Q9BZZ2 1709 aa27.36■■□□□ 1.97
TRIM29-221ENST00000627238 YEATS2Q9ULM3 1422 aa27.36■■□□□ 1.97
TRIM29-221ENST00000627238 UBTFP17480 764 aaKnown RBP27.36■■□□□ 1.97
TRIM29-221ENST00000627238 RIMS1Q86UR5 1692 aaKnown RBP27.36■■□□□ 1.97
TRIM29-221ENST00000627238 LMTK3Q96Q04 1460 aa27.35■■□□□ 1.97
TRIM29-221ENST00000627238 MYO5CQ9NQX4 1742 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms